Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo06g00158 ATGGCTGTCTCTTGTCTCTGTTTTTGTCTTCTGTTTGGGGGCGCCGCCGTCGTTGCTGCCGCTGGCGGTGGAAGCGGCGGCGGTTCCAGGCAGCTCGATAACACACCCACATGGGCTGTTGCTGGGGTTTGCTTCTTTTTCATTGTTATTTCCATTGTATTGGAGAAAGTTCTTCACAAAGTTGGAACGTGGTTGACAGAAAAGCACAAGAGTTCTCTGTTGGAAGCTCTGGAGAAGGTTAAGGCTGAGCTGATGATTTTGGGATTCATTTCCCTGCTTCTGACCTTTGCACAAGGATTTATAGTCAAAATCTGCATTCCTCCAGCCATTGCCAATACCATGTTGCCTTGCCCACTTGACAAGAAAGATGCCTCATCGTCTGACAACAGCGACGACGAACATCACCGGAGGCTTCAATGGCTAATCCGAAGATCGTTGGCTGGAGGCCACAATGTCGCCCCGTGTAAGGATGGTAAGGTGTCTCTTATATCTATTGATGGATTGCATCAGTTGCATATTCTCATATTCTTCCTAGCTGTGTTTCATGTGGTCTTTAGTGTTACCACAATGACACTTGGAAGGGTAAAGATCCGAGGCTGGAAGGAGTGGGAGAAGGAAACTTCGACTCATAACTACGAGTTCTTCAATGATCCTGCAAGATTTAGGCTCACTCATGAGACATCTTTTGTGAAAGCACACACCAGCTTTTGGACACGCCTTCCTGTCTTCTTCTATATTGGCTGCTTCTTCAGGCAATTTTATGGCTCGGTTAGTAAGGCCGATTACTTAACGCTCCGCAATGGATTCATAACAGTTCATTTAGCACCCGGAAGTAAATTTGACTTCCAAAGATATATCAAAAGGTCATTAGAAGATGACTTCAAGGTAGTCGTCGGTGTGAGTCCTGTTCTGTGGTTGTCATTTGTGATCTTCCTGCTTCTTAATGTAGCTGGGTGGCGGACGATGTTTTGGGCGTCGTTTATCCCTTTGATCATAATCTTAGCTGTTGGATCAAAACTTCAAGCCATTTTGACTAGGATGGCTCTTGAAATCTCGGAGAAACATGCCGTGGTCCAGGGAATTCCGCTCGTGCAAGGGTCCGACAAGTACTTTTGGTTCGGTCGACCTCAACTCATTCTTCATCTCATGCATTTTGCTTTGTTTCAGAATGCATTCCAGATCACCTTTAACTTGTCTATACTGGTATTCTTCTCGACGGTCATAACATTGTTTCTCTGCAGCTACGTTACGCTTCCGATATACGCCCTTGTAACTCAGATGGGGTCGGGCATGAAAACGTCCATTTTCGACGAACAAACATCAAAGGCGCTCAAGAAATGGCATGAAAAAGCCAAGAAGAAGCGGGTTCTACGAAGCTCAGCAACTAGAACATTTGGACGTAGTTCTAATGCTTCGCCTTTGAGCTCCTTTGGACGCTCATTGCGACGGTTTAAAACCACGGGACACTCCATACGTGTGCCTGCGTACGATGACCTTGAGTCGTCTGATTACGAGGGCGATTCACCAGCAACGGCTATGCAAGTATCGACTATTGAATCGAGTAACGTCGATGTGGATGGAGATGAAATACACGAAATTGGTGAAAGGGAACAACCGGAGAGTCTAGAGCAAACTAAAGAAGAAGGAGATGAGTTCTCGTTTATAAAGCCTGCACCAGTGAAATGA 1686 45.91 MAVSCLCFCLLFGGAAVVAAAGGGSGGGSRQLDNTPTWAVAGVCFFFIVISIVLEKVLHKVGTWLTEKHKSSLLEALEKVKAELMILGFISLLLTFAQGFIVKICIPPAIANTMLPCPLDKKDASSSDNSDDEHHRRLQWLIRRSLAGGHNVAPCKDGKVSLISIDGLHQLHILIFFLAVFHVVFSVTTMTLGRVKIRGWKEWEKETSTHNYEFFNDPARFRLTHETSFVKAHTSFWTRLPVFFYIGCFFRQFYGSVSKADYLTLRNGFITVHLAPGSKFDFQRYIKRSLEDDFKVVVGVSPVLWLSFVIFLLLNVAGWRTMFWASFIPLIIILAVGSKLQAILTRMALEISEKHAVVQGIPLVQGSDKYFWFGRPQLILHLMHFALFQNAFQITFNLSILVFFSTVITLFLCSYVTLPIYALVTQMGSGMKTSIFDEQTSKALKKWHEKAKKKRVLRSSATRTFGRSSNASPLSSFGRSLRRFKTTGHSIRVPAYDDLESSDYEGDSPATAMQVSTIESSNVDVDGDEIHEIGEREQPESLEQTKEEGDEFSFIKPAPVK 561
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 846799 852132 + CmoCh06G001580.1 Cmo06g00158 383720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo06g00158 561 PANTHER MLO-LIKE PROTEIN 18 532 - -
Cmo06g00158 561 Pfam Mlo family 30 469 IPR004326 GO:0006952|GO:0016021
Cmo06g00158 561 MobiDBLite consensus disorder prediction 524 554 - -
Cmo06g00158 561 PANTHER MLO-LIKE PROTEIN 1 18 532 IPR004326 GO:0006952|GO:0016021
Cmo06g00158 561 MobiDBLite consensus disorder prediction 521 561 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo06g00158 Cmo-Chr6:846799 Cmo07g00374 Cmo-Chr7:1715847 0 dispersed
Cmo06g00158 Cmo-Chr6:846799 Cmo03g00647 Cmo-Chr3:5880248 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo06g00158 K08472 - csv:101205522 874.774