Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo06g00186 ATGGCAATAAGAATCAAGCTCCAGGCTCCAAGGTTAGGCGGACGAGAAGGCTTTGAAATCAAGCAAAGCTATGCGCAGAGTCACAAACTGGTGATTTGCCGGATTATGAGTTATAACGAGAAGAATCGAGGTAGAGATGGTAGGGAAACCGAGCAGCAGCCAGTTAAGAGGAACTCTGTTGACGCAGAACGGAAATCGGTCAGCCAAAATGGATCCATTACGGCTCAACAGTTGACGATTGATGAGAATCTTCTTGTCGACCCGAAATTACTATTCATTGGATCCAAGATTGGCGAGGGTGCTCATGGGAAGGTTTATGAAGGCAGGTATCGGAACAAAATCGTTGCCATTAAAGTTCTCCATCGAGGGAGTACTCCGGAAGAAAGAGCAGCACTAGAGAACCGTTTTGCTCGTGAAGTTAATATGATGTCCCGGGTAAAACATGACAATCTTGTCAAGTTTATTGGAGCTTGTAAAGAACCACTAATGGTGATAGTTACAGAGCTATTACCAGGAATGTCACTGAGGAAGTATCTGATGAATAATCGTAAGCAACGGCTGGATCCTCGGTTGGCTATTAACTTTGCTTTGGATGTTGCTCGTGCTATGGATTGTCTACATGCCAATGGGATTATACATAGAGATCTGAAACCCGGTATGCTCGGTCGAGTGTCCTTTCTATTATAA 687 44.25 MAIRIKLQAPRLGGREGFEIKQSYAQSHKLVICRIMSYNEKNRGRDGRETEQQPVKRNSVDAERKSVSQNGSITAQQLTIDENLLVDPKLLFIGSKIGEGAHGKVYEGRYRNKIVAIKVLHRGSTPEERAALENRFAREVNMMSRVKHDNLVKFIGACKEPLMVIVTELLPGMSLRKYLMNNRKQRLDPRLAINFALDVARAMDCLHANGIIHRDLKPGMLGRVSFLL 228
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1006451 1008029 - CmoCh06G001860.1 Cmo06g00186 383748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo06g00186 228 ProSiteProfiles Protein kinase domain profile. 91 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo06g00186 228 Pfam Protein tyrosine and serine/threonine kinase 93 216 IPR001245 GO:0004672|GO:0006468
Cmo06g00186 228 Gene3D Phosphorylase Kinase; domain 1 79 166 - -
Cmo06g00186 228 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 52 221 - -
Cmo06g00186 228 PANTHER SERINE-THREONINE PROTEIN KINASE 52 221 - -
Cmo06g00186 228 MobiDBLite consensus disorder prediction 42 72 - -
Cmo06g00186 228 ProSitePatterns Protein kinases ATP-binding region signature. 97 118 IPR017441 GO:0005524
Cmo06g00186 228 Gene3D Transferase(Phosphotransferase) domain 1 167 220 - -
Cmo06g00186 228 SUPERFAMILY Protein kinase-like (PK-like) 82 218 IPR011009 -
Cmo06g00186 228 MobiDBLite consensus disorder prediction 42 63 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo06g00186 Cmo14g00014 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo06g00186 Cmo-Chr6:1006451 Cmo11g01659 Cmo-Chr11:11780192 9.29E-65 dispersed
Cmo06g00186 Cmo-Chr6:1006451 Cmo14g00014 Cmo-Chr14:77131 3.48E-112 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74390 PF07714 PK_Tyr_Ser-Thr 4.30E-27 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo06g00186 - - cmax:111481423 318.546