Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo06g00230 | ATGGAAGGGAGAGACGAAGATGTGAGAGTTGGAGCCAACAGGTTCGAGGAGAGGCAGCCGATTGGGACGGCAGCTCAGACCCAAAATGCGGCAAAGGACTACCGAGAGCCGGCGCCGGCGCCGCTGGTTGAGGCGGGGGAGCTAAGGTCATGGTCGTTCTACAGAGCTGGAATTGCAGAGTTTGTAGCCACTTTCCTGTTCCTTTATGTCACTATTTTGACAGTAATGGGAATCGCCAAATCTCCCAATAAGTGCAACACTGTTGGCGTCCAAGGCATTGCTTGGGCCTTTGGCGGCATGATCTTTGCTCTTGTTTATTGCACCGCTGGTATTTCAGGTACCCACGTCCACTCATTTAAATAA | 363 | 52.07 | MEGRDEDVRVGANRFEERQPIGTAAQTQNAAKDYREPAPAPLVEAGELRSWSFYRAGIAEFVATFLFLYVTILTVMGIAKSPNKCNTVGVQGIAWAFGGMIFALVYCTAGISGTHVHSFK | 120 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 1232789 | 1234265 | + | CmoCh06G002300.1 | Cmo06g00230 | 383792 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo06g00230 | 120 | PANTHER | AQUAPORIN OR AQUAGLYCEROPORIN RELATED | 1 | 117 | IPR034294 | - | |
Cmo06g00230 | 120 | SUPERFAMILY | Aquaporin-like | 47 | 116 | IPR023271 | - | |
Cmo06g00230 | 120 | Pfam | Major intrinsic protein | 47 | 116 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo06g00230 | 120 | PRINTS | Major intrinsic protein family signature | 55 | 74 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo06g00230 | 120 | PRINTS | Major intrinsic protein family signature | 97 | 120 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo06g00230 | 120 | PANTHER | AQUAPORIN PIP1-2 ISOFORM X2 | 1 | 117 | - | - | |
Cmo06g00230 | 120 | Gene3D | Glycerol uptake facilitator protein. | 40 | 118 | IPR023271 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo06g00230 | Cmo-Chr6:1232789 | Cmo02g01479 | Cmo-Chr2:8662590 | 4.95E-60 | dispersed | |
Cmo04g01194 | Cmo-Chr4:6106583 | Cmo06g00230 | Cmo-Chr6:1232789 | 2.87E-63 | wgd | |
Cmo04g00163 | Cmo-Chr4:841489 | Cmo06g00230 | Cmo-Chr6:1232789 | 1.65E-62 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo06g00230 | K09872 | - | cpap:110807714 | 202.601 |