Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo06g00285 ATGGCCCAATTCTTTCTCCTCTGTTTCTTCTTTCTCCTCTTCTTCGCCGCCCCCGCCGCGTCGCAGCAGCTCTACTTCGCCGGATTCCACGACGCCGCCGCTGCAGCCAACTTATCTCTCACGGACATCGCCAAGATCGAGCCGAATGGAATCTTAAAGCTCACGAACGACACCAGTCGACTACAGGGTCATGCCTTTTATACCTCCCCTGTTCGCTTCAAAAACTCCTCCGACGGCAAAGCTTTTTCCTTCTCCACCGCTTTCGCCATCGCCGTCGTCCCCGAGTATCCAACCCTCGGTGGTCATGGCCTTGCCTTCACAATCGCACCCTCCAAAACCCTCCGTGGATTACCCAGTCAGTATTTAGGCCTTCTCAATGCCACCGATGTCGGGAACTTCTCGAACCATCTCTTGGCTGTCGAGTTCGATACCGTTCAAGATTTCGAGTTTGGCGACATCAACGACAACCATGTCGGAATCAATCTCAATAATATGGTCTCTAATGCCTCTACCACAGCTTCGTATTTCGTCGACGACGGACCCACCAAACAAAACTTAACCCTAAAAAGTGGGAGGCCAGTTCAAGCGTGGATCGATTATGATTCCTCTGTAAATTCCCTCACCGTGGCGCTTTCACCGTTTTCGACCAAACCCAAGAAGCCGATTCTGTCGTTTAATGTAGATCTCTCTCCGATTCTTCACGAGTTTATGTATGTTGGGTTCTCCGCCTCGACAGGGCTTCTTGCGAGCTCTCACTATGTGTTGGGATGGAGTTTCAGTATGAACGGCGCCGCCCAGTCTCTGGATCTTTCCTCTTTGCCGTCTGTTCCAGGTCCGAAGAAGAATCACACTGGTTTCACGATTGGGGTTTCCATTACGGCTGTTTTAATCGTGATAATAGCGATTTGTGTAGCTGTTTTCATCATTTGGAAGATAAAAACCGCGGACATAATCGAATCATGGGAGCTCGAAATTGGCCCTCATCGGTACTCTTACAAGGAGCTCAAGCAAGCGACTAAGCGATTTAGGGATAAAGAGCTTCTGGGTCGCGGTGGATTTGGGAAGGTTTATAAAGGAACTTTACCAAATACGAAAACCCAAGTGGCTGTTAAGCGAATTTCTCATGAATCGAAACAGGGTTTGAGGGAATTTGTGTCGGAAATTGCTAGTATTGGTCGGCTTCGTCACCGGAACTTGGTTCAGTTACTGGGATGGTGTCGCCGCCGTGGCGATCTGCTTCTGGTTTATGAGTTTATGGCTAATGGAAGCTTGGATAACTACATTTTTGATGAGCCGGATGTGATTTTGAGCTGGAATCAGAGGTTTCGGATCATCCAGGGCGTTGCCTCCGGTCTTTTGTACTTACATGAAGGCTACGAACAGGTGGTTCTTCATAGAGATGTGAAGGCCAGTAATGTTCTGCTGGACAGCGAGATGAACGGGAAGCTCGGCGACTTCGGCCTTGCGCGGCTGTACGAGCACGGGGCGAATCCAAGCACTACGCGGGTGGTCGGAACATTGGGATATCTGGCGCCGGAGCTTCCCAGAACAGGGAAGTCCACCACAAGCTCAGATGTATATGCATTTGGCGCACTGCTACTGGAAGTGGCCTGCGGACGGCGGCCAATCGACCCGAAAGTGTCGTCGGAGGAATTGGTGCTGGTGGATTGGGTATGGGAGAATTACAGAGAAGGGAGATTACTGGAAGTAATGGATCCAAAATTGAAAGGAGATTTCAATGAGGTTGAAGCTGTTATGATTCTGAAATTGGGGTTGTTCTGTTCGAACGACACGGCGGCGGCACGGCCGAGTATGAGGCAGGTGGTGCGGTTTTTGGAGGGAGAAATTGGCGTTCCCGACGAGATTTCAGCGCCGAGAGTGATGGAAGGAGGGAAGAACAGTGAAGGGTTCGATGCTTTTGTGAATTCGTTTGCTTCTTCTTCGTTTAACAAGTTTAGCACCAATTCGTTGACTGGAAATCGAGATATGGATATGAGTTTTGCTTCTATTTCCACGTCTCTTTCGCTTCTAAGTGGCAGAGACTGA 2046 49.71 MAQFFLLCFFFLLFFAAPAASQQLYFAGFHDAAAAANLSLTDIAKIEPNGILKLTNDTSRLQGHAFYTSPVRFKNSSDGKAFSFSTAFAIAVVPEYPTLGGHGLAFTIAPSKTLRGLPSQYLGLLNATDVGNFSNHLLAVEFDTVQDFEFGDINDNHVGINLNNMVSNASTTASYFVDDGPTKQNLTLKSGRPVQAWIDYDSSVNSLTVALSPFSTKPKKPILSFNVDLSPILHEFMYVGFSASTGLLASSHYVLGWSFSMNGAAQSLDLSSLPSVPGPKKNHTGFTIGVSITAVLIVIIAICVAVFIIWKIKTADIIESWELEIGPHRYSYKELKQATKRFRDKELLGRGGFGKVYKGTLPNTKTQVAVKRISHESKQGLREFVSEIASIGRLRHRNLVQLLGWCRRRGDLLLVYEFMANGSLDNYIFDEPDVILSWNQRFRIIQGVASGLLYLHEGYEQVVLHRDVKASNVLLDSEMNGKLGDFGLARLYEHGANPSTTRVVGTLGYLAPELPRTGKSTTSSDVYAFGALLLEVACGRRPIDPKVSSEELVLVDWVWENYREGRLLEVMDPKLKGDFNEVEAVMILKLGLFCSNDTAAARPSMRQVVRFLEGEIGVPDEISAPRVMEGGKNSEGFDAFVNSFASSSFNKFSTNSLTGNRDMDMSFASISTSLSLLSGRD 681
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1423945 1426457 + CmoCh06G002850.1 Cmo06g00285 383847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo06g00285 681 ProSiteProfiles Protein kinase domain profile. 342 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo06g00285 681 Gene3D Phosphorylase Kinase; domain 1 327 418 - -
Cmo06g00285 681 Pfam Protein kinase domain 343 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo06g00285 681 Pfam Legume lectin domain 23 273 IPR001220 GO:0030246
Cmo06g00285 681 Gene3D - 21 262 - -
Cmo06g00285 681 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Cmo06g00285 681 PANTHER - 4 670 - -
Cmo06g00285 681 SUPERFAMILY Concanavalin A-like lectins/glucanases 23 279 IPR013320 -
Cmo06g00285 681 ProSitePatterns Legume lectins beta-chain signature. 138 144 IPR019825 -
Cmo06g00285 681 SMART serkin_6 342 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo06g00285 681 SUPERFAMILY Protein kinase-like (PK-like) 324 628 IPR011009 -
Cmo06g00285 681 CDD lectin_legume_LecRK_Arcelin_ConA 26 263 IPR001220 GO:0030246
Cmo06g00285 681 ProSitePatterns Protein kinases ATP-binding region signature. 348 371 IPR017441 GO:0005524
Cmo06g00285 681 CDD STKc_IRAK 348 614 - -
Cmo06g00285 681 Gene3D Transferase(Phosphotransferase) domain 1 419 626 - -
Cmo06g00285 681 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.4 4 670 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo06g00285 Cmo07g01051 CCT
Cmo06g00285 Cmo07g01051 ECH
Cmo06g00285 Cmo14g00121 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo06g00285 Cmo-Chr6:1423945 Cmo14g00123 Cmo-Chr14:542648 0 dispersed
Cmo14g00192 Cmo-Chr14:869864 Cmo06g00285 Cmo-Chr6:1423945 3.76E-141 dispersed
Cmo16g01000 Cmo-Chr16:6893728 Cmo06g00285 Cmo-Chr6:1423945 1.27E-138 dispersed
Cmo19g00505 Cmo-Chr19:6001254 Cmo06g00285 Cmo-Chr6:1423945 3.60E-126 dispersed
Cmo19g00508 Cmo-Chr19:6018940 Cmo06g00285 Cmo-Chr6:1423945 2.63E-115 dispersed
Cmo14g00121 Cmo-Chr14:539127 Cmo06g00285 Cmo-Chr6:1423945 0 wgd
Cmo03g00426 Cmo-Chr3:4932837 Cmo06g00285 Cmo-Chr6:1423945 0 wgd
Cmo06g00285 Cmo-Chr6:1423945 Cmo07g01051 Cmo-Chr7:5340491 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74398 PF00069 Pkinase 3.50E-46 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo06g00285 - - csv:101223168 1165.98