Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo06g00337 ATGGCTACTACTTTAAATGTGGTGCCGGAAGTTCGTCCGCCGTCATTAGAGGCCGACGCCGAACAGCCTCCACTCTTCGACGGAACTACCAGGTTGTATATAGCTTACTATTGCCCGTTTGCACAGCGTGCTTGGATCACAAGAAATTACAAGGGACTACAAGATCAAATTAAACTAGTGCCTCTAAACCTTCAAAACAGGCCTGCCTGGTATAAGGAAAAAGTATACCCTTCAAACAAGGTGCCAGCTTTGGAACACAATGGGAAAGTTACAGGAGAAAGCCTTGATTTGATCAAATACATAGATAGCAACTTTGAAGGACCTTCTCTTTTCCCAGATGATCCTGTTAAAAAACAATTCGGTGAAGAGTTGCTAGCTTATACTGACACATTTCTTGGGGCAGTATACCCTTCATTTAAGGGTGACCCAGTCAAGGAAGCAGGTCCTCAATTTGATTACCTGGAGACTGCTCTGCAAAAATTTGATGATGGCCCATTCTTTTTGGGTCAATTCAGTGGGGTGGACATTGCATACATCACATTTATTGAACGGTTCCATGTTTTCTTAGCCAAGGTTTTCAACTATGATATCACAGAAGGAAGACCTAATCTAGCTGCATGGATTGAGGAGTTAAACAAGATTGATGCTTACAAGCAAACAAAATATGATCCTAAAGCCATTGTTGAACTTTACAAGACTCGCTTCATGGCTTAA 714 41.88 MATTLNVVPEVRPPSLEADAEQPPLFDGTTRLYIAYYCPFAQRAWITRNYKGLQDQIKLVPLNLQNRPAWYKEKVYPSNKVPALEHNGKVTGESLDLIKYIDSNFEGPSLFPDDPVKKQFGEELLAYTDTFLGAVYPSFKGDPVKEAGPQFDYLETALQKFDDGPFFLGQFSGVDIAYITFIERFHVFLAKVFNYDITEGRPNLAAWIEELNKIDAYKQTKYDPKAIVELYKTRFMA 237
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1631372 1635248 + CmoCh06G003370.1 Cmo06g00337 383899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo06g00337 237 SUPERFAMILY Thioredoxin-like 22 110 IPR036249 -
Cmo06g00337 237 CDD GST_C_Lambda 114 232 - -
Cmo06g00337 237 Gene3D Glutaredoxin 3 106 - -
Cmo06g00337 237 SUPERFAMILY GST C-terminal domain-like 105 235 IPR036282 -
Cmo06g00337 237 Pfam Glutathione S-transferase, N-terminal domain 32 108 IPR004045 -
Cmo06g00337 237 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 28 109 IPR004045 -
Cmo06g00337 237 SFLD Glutathione Transferase (cytosolic) 31 212 IPR040079 -
Cmo06g00337 237 PANTHER GLUTATHIONE S-TRANSFERASE L1 4 236 IPR044629 GO:0004364
Cmo06g00337 237 Gene3D - 107 237 - -
Cmo06g00337 237 Pfam Glutathione S-transferase, C-terminal domain 150 209 - -
Cmo06g00337 237 PANTHER GLUTATHIONE S-TRANSFERASE L2, CHLOROPLASTIC 4 236 - -
Cmo06g00337 237 SFLD Main (cytGST) 31 212 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo06g00337 Cmo-Chr6:1631372 Cmo04g00338 Cmo-Chr4:1659484 8.19E-08 dispersed
Cmo06g00337 Cmo-Chr6:1631372 Cmo06g00338 Cmo-Chr6:1635847 4.04E-130 tandem
Cmo04g01303 Cmo-Chr4:6614561 Cmo06g00337 Cmo-Chr6:1631372 3.08E-110 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo06g00337 K00799 - csv:101210004 431.024