Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo06g00338 | ATGGCTGCCTTCGTGGAAGAGGTTTTACCACCGTCGTTGGATGCCACCGCCGAACAACCTCCATTGTTCGATGGAACTACAAGGTTGTATACTGCTTACATTTGTCCATATGCTCAACGTGTGTGGATCACAAGGAATTACAAGGGATTACAAGATAAAATTAAGCTAGTTCCTCTCAACCTTTTTAATAGGCCTGACTGGTATAAGGAAAAAGTATACCCTACAAACAAGGTGCCAGCTCTGGAACATAATGGGAAAATTATTGGAGAAAGTATTGATCTGATCAAATATGTTGATAGCAACTTTGAAGGACCTTCTCTTCTCCCTGATGATCCTGCTAAAAAGGAGTATGCTGAAGAGTTGATATCCTACAGTGATACGTTTAATGGTGCAATAATCTCTTCGTTTAAAGGCGATACTGCAAAGGAAGCAGGTGCTCAATTTGATTATTTGGAAAATGCTTTGCAAAAATTCGATGGTCCCTTCTTCCTTGGAGAAATCAGTCAGGTGGATATAGTATACATTCCATTTGTTGAAAGATTCCAAGTTTTCTTATTGGAAGTTTTCAAGATTGACATCACAGAAGGAAGGCCTAAACTAGCTGCATGGATTGAGGAGTTCAACAAGAGTGATGCTTACAAACAAACAAAAGCCGATCCCAAGTTGGTCGTTGAAGTTTATAGGAAGCGATTCTTGGTAACATTTGCTTTGCTACACATCTTGCATATAAATGCAATTTTCCTCAAGAATCTATCTATCTATGCTGCTTTGTTAACATCTTTTTTTGTATACAAATTGTCTAAGCAGGGTTAA | 813 | 38.5 | MAAFVEEVLPPSLDATAEQPPLFDGTTRLYTAYICPYAQRVWITRNYKGLQDKIKLVPLNLFNRPDWYKEKVYPTNKVPALEHNGKIIGESIDLIKYVDSNFEGPSLLPDDPAKKEYAEELISYSDTFNGAIISSFKGDTAKEAGAQFDYLENALQKFDGPFFLGEISQVDIVYIPFVERFQVFLLEVFKIDITEGRPKLAAWIEEFNKSDAYKQTKADPKLVVEVYRKRFLVTFALLHILHINAIFLKNLSIYAALLTSFFVYKLSKQG | 270 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 1635847 | 1638886 | - | CmoCh06G003380.1 | Cmo06g00338 | 383900 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo06g00338 | 270 | PANTHER | GLUTATHIONE S-TRANSFERASE L2, CHLOROPLASTIC | 3 | 232 | - | - | |
Cmo06g00338 | 270 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 25 | 106 | IPR004045 | - | |
Cmo06g00338 | 270 | SFLD | Glutathione Transferase (cytosolic) | 28 | 208 | IPR040079 | - | |
Cmo06g00338 | 270 | PANTHER | GLUTATHIONE S-TRANSFERASE L1 | 3 | 232 | IPR044629 | GO:0004364 | |
Cmo06g00338 | 270 | SUPERFAMILY | GST C-terminal domain-like | 102 | 231 | IPR036282 | - | |
Cmo06g00338 | 270 | Pfam | Glutathione S-transferase, N-terminal domain | 29 | 105 | IPR004045 | - | |
Cmo06g00338 | 270 | SFLD | Main (cytGST) | 28 | 208 | - | - | |
Cmo06g00338 | 270 | Gene3D | Glutaredoxin | 1 | 103 | - | - | |
Cmo06g00338 | 270 | Gene3D | - | 104 | 235 | - | - | |
Cmo06g00338 | 270 | Pfam | Glutathione S-transferase, C-terminal domain | 143 | 205 | - | - | |
Cmo06g00338 | 270 | SUPERFAMILY | Thioredoxin-like | 20 | 107 | IPR036249 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo04g01285 | Cmo-Chr4:6518889 | Cmo06g00338 | Cmo-Chr6:1635847 | 1.99E-09 | dispersed | |
Cmo04g01303 | Cmo-Chr4:6614561 | Cmo06g00338 | Cmo-Chr6:1635847 | 1.27E-111 | dispersed | |
Cmo06g00338 | Cmo-Chr6:1635847 | Cmo14g01905 | Cmo-Chr14:14199702 | 2.33E-11 | dispersed | |
Cmo06g00337 | Cmo-Chr6:1631372 | Cmo06g00338 | Cmo-Chr6:1635847 | 4.04E-130 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo06g00338 | K00799 | - | csv:101211241 | 439.499 |