Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo06g00338 ATGGCTGCCTTCGTGGAAGAGGTTTTACCACCGTCGTTGGATGCCACCGCCGAACAACCTCCATTGTTCGATGGAACTACAAGGTTGTATACTGCTTACATTTGTCCATATGCTCAACGTGTGTGGATCACAAGGAATTACAAGGGATTACAAGATAAAATTAAGCTAGTTCCTCTCAACCTTTTTAATAGGCCTGACTGGTATAAGGAAAAAGTATACCCTACAAACAAGGTGCCAGCTCTGGAACATAATGGGAAAATTATTGGAGAAAGTATTGATCTGATCAAATATGTTGATAGCAACTTTGAAGGACCTTCTCTTCTCCCTGATGATCCTGCTAAAAAGGAGTATGCTGAAGAGTTGATATCCTACAGTGATACGTTTAATGGTGCAATAATCTCTTCGTTTAAAGGCGATACTGCAAAGGAAGCAGGTGCTCAATTTGATTATTTGGAAAATGCTTTGCAAAAATTCGATGGTCCCTTCTTCCTTGGAGAAATCAGTCAGGTGGATATAGTATACATTCCATTTGTTGAAAGATTCCAAGTTTTCTTATTGGAAGTTTTCAAGATTGACATCACAGAAGGAAGGCCTAAACTAGCTGCATGGATTGAGGAGTTCAACAAGAGTGATGCTTACAAACAAACAAAAGCCGATCCCAAGTTGGTCGTTGAAGTTTATAGGAAGCGATTCTTGGTAACATTTGCTTTGCTACACATCTTGCATATAAATGCAATTTTCCTCAAGAATCTATCTATCTATGCTGCTTTGTTAACATCTTTTTTTGTATACAAATTGTCTAAGCAGGGTTAA 813 38.5 MAAFVEEVLPPSLDATAEQPPLFDGTTRLYTAYICPYAQRVWITRNYKGLQDKIKLVPLNLFNRPDWYKEKVYPTNKVPALEHNGKIIGESIDLIKYVDSNFEGPSLLPDDPAKKEYAEELISYSDTFNGAIISSFKGDTAKEAGAQFDYLENALQKFDGPFFLGEISQVDIVYIPFVERFQVFLLEVFKIDITEGRPKLAAWIEEFNKSDAYKQTKADPKLVVEVYRKRFLVTFALLHILHINAIFLKNLSIYAALLTSFFVYKLSKQG 270
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1635847 1638886 - CmoCh06G003380.1 Cmo06g00338 383900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo06g00338 270 PANTHER GLUTATHIONE S-TRANSFERASE L2, CHLOROPLASTIC 3 232 - -
Cmo06g00338 270 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 25 106 IPR004045 -
Cmo06g00338 270 SFLD Glutathione Transferase (cytosolic) 28 208 IPR040079 -
Cmo06g00338 270 PANTHER GLUTATHIONE S-TRANSFERASE L1 3 232 IPR044629 GO:0004364
Cmo06g00338 270 SUPERFAMILY GST C-terminal domain-like 102 231 IPR036282 -
Cmo06g00338 270 Pfam Glutathione S-transferase, N-terminal domain 29 105 IPR004045 -
Cmo06g00338 270 SFLD Main (cytGST) 28 208 - -
Cmo06g00338 270 Gene3D Glutaredoxin 1 103 - -
Cmo06g00338 270 Gene3D - 104 235 - -
Cmo06g00338 270 Pfam Glutathione S-transferase, C-terminal domain 143 205 - -
Cmo06g00338 270 SUPERFAMILY Thioredoxin-like 20 107 IPR036249 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g01285 Cmo-Chr4:6518889 Cmo06g00338 Cmo-Chr6:1635847 1.99E-09 dispersed
Cmo04g01303 Cmo-Chr4:6614561 Cmo06g00338 Cmo-Chr6:1635847 1.27E-111 dispersed
Cmo06g00338 Cmo-Chr6:1635847 Cmo14g01905 Cmo-Chr14:14199702 2.33E-11 dispersed
Cmo06g00337 Cmo-Chr6:1631372 Cmo06g00338 Cmo-Chr6:1635847 4.04E-130 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo06g00338 K00799 - csv:101211241 439.499