Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo06g00363 ATGGTTAATTTCTCTCCATTTTCCACGTCATTTACCTTTATATTACTTCTATTTTCCTTTTCCAGTGCTGGCATTTTCAATTCCGCCGCCGTAATATCTGCAGCCGCCGCCACAGAGTTCGACTTCGGCACCGTCGCCCTCAGTAGCTTGAAGCTCCTTGGCGATGCTCACTTAAATAACGGGAGCGTTATGCTTACGCGCGACCTTGCCGTCCCCAACTCCGGCGCCGGCAGAGTCCTCTACGCCCAACCTATCAGATTCCGGCAGCCAGGGATTAACTACCTCGCCAGTTTCTCCACATTTTTCTCCTTCTCCATTACGAATCTCAACCCTTCGTCGATCGGCGGCGGGCTGGCGTTTGTAATTTCACCGAACGCCGACACTGTCGGCGGCGCAGGAGGGTTCTTGGGCCTGGCCGACGAGAGGGGATTGGGATTCGTGGCGGTGGAATTTGACACGTTGATGGATGTCGAATTTAAGGATATTAATGGGAACCATGTCGGATTGGATCTAAACGACATGGTTTCGTTGCAGGTTAAAGATCTGGATGGAATTGGAATCGATCTCAAAAGCGGCGATACGGTGAATTCTTGGATCGAATACGATGGGTCGTCTCGGATCTTTGAAATTTTCGTTTCTTATTCGAATTTGAAACCGACAGAACCTTTGTTGTCGTTCAATCTCGATCTCGACCCGTATTTGAACGATTTTATGTATGTCGGATTTTCCGGTTCGACTCAGGGGAGTACGGAAGTTCACAGTGTGGACTGGTGGAGTTTTACGTCGTCGTTTGACTCAAATTACCCACCGGGGGCGGTTCCGCCGCCACCGACGACGACGCTAATGAACCCAGCAGCCAATATCGCCCAGTCACCGCCGCCGACGCAGCCACCGTCAGGGTCAAATTCTGTCACGCAGAAGGACACCAAGTCGCCGTCCTGCCACAACGGACTCTGTAAGCAAAACGCCGGTGCAGTGGTCGGAGTAGTGACGGCGGGGGCGTTTGTTTTAGCATTATTTGCCGGTGGGTTAATCTGGGTATATTCCAAAAAGATCAAACGGGTGAAAAAATCGGACTCCCTCGCTTCTGAAATCATCAAAACGCCGAAGGAATTCACTTACAAAGAGCTCAAAATCGCCACGAAATGCTTCAATTCGAATAGAATCATCGGCCATGGCGCTTTTGGGACTGTTTATAAAGGGATTATGCCGGAGACCGGCGACATTGTGGCGGTGAAACGGTGCAGCCATAGTACACAAGGGAAGACCGAATTTCTCTCTGAACTTTCGATCATCGGAACTCTCCGCCACCGGAATTTGGTCCGTCTTCAAGGATGGTGTCACGAAAAGGGCGAAATTCTACTAGTTTACGATTTAATGCCAAATGGGAGTTTGGATAAAGCTCTATTCGAGGCCAGAACGCCGCTGCCGTGGCCTCACCGGAGAAAAATCCTTCTCGGCGTCGCCTCCGCGTTGGCGTATTTGCATCAAGAATGTGAAAATCAGGTCATTCACAGAGACATTAAAACCAGTAACATAATGTTGGATGAAGGATTCAATGCCCGATTAGGCGATTTCGGGTTGGCCCGACAAGTGGAGCACGATAAATCACCGGACGCCACCGTCGCCGCCGGCACAATGGGGTATTTAGCCCCGGAATATCTCCTCACCGGCCGTGCAACGGAGAAAACCGACGTATTCAGCTTCGGCGCCGTAGTACTCGAAGTCGCCAGCGGTAGACGGCCAATCGAGAAAGAGACGGTTTCCGCCTCCCGCGGCGGAAGATTTGGCGTCAATAGTAATTTGGTCGACTGGGTTTGGAATTTACACCGAGATGGACGGTTATTGACGGCTGCCGACGGGAGACTCAGCGGCGAGTTCGACGAATCGGAGATGAGGAAAGTTTTGTTAGTCGGGTTGGCTTGTTCGCACCCGGATCCAATGACCCGACCCACAATGAGAGGCGTAGTGCAAATGTTAATCGGCGATTCAGAGATTCCGATCGTCCCTCGGTCCAAACCGTCGACTAGTTTCAGCACCGCCCATTTGCTTCTCACTTTACAAGACAGCGTGTCCGATCTCAACGGCATGATCGCCATTTCTACTTCCTCGTCCGAGGTGAGCTTCAAGGGCATGGATCTGATCTCGCTGGATGATCGGACGGTGGAGATCCATCAAACGTCAGAATAA 2190 51.32 MVNFSPFSTSFTFILLLFSFSSAGIFNSAAVISAAAATEFDFGTVALSSLKLLGDAHLNNGSVMLTRDLAVPNSGAGRVLYAQPIRFRQPGINYLASFSTFFSFSITNLNPSSIGGGLAFVISPNADTVGGAGGFLGLADERGLGFVAVEFDTLMDVEFKDINGNHVGLDLNDMVSLQVKDLDGIGIDLKSGDTVNSWIEYDGSSRIFEIFVSYSNLKPTEPLLSFNLDLDPYLNDFMYVGFSGSTQGSTEVHSVDWWSFTSSFDSNYPPGAVPPPPTTTLMNPAANIAQSPPPTQPPSGSNSVTQKDTKSPSCHNGLCKQNAGAVVGVVTAGAFVLALFAGGLIWVYSKKIKRVKKSDSLASEIIKTPKEFTYKELKIATKCFNSNRIIGHGAFGTVYKGIMPETGDIVAVKRCSHSTQGKTEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARTPLPWPHRRKILLGVASALAYLHQECENQVIHRDIKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSFGAVVLEVASGRRPIEKETVSASRGGRFGVNSNLVDWVWNLHRDGRLLTAADGRLSGEFDESEMRKVLLVGLACSHPDPMTRPTMRGVVQMLIGDSEIPIVPRSKPSTSFSTAHLLLTLQDSVSDLNGMIAISTSSSEVSFKGMDLISLDDRTVEIHQTSE 729
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1755274 1757463 - CmoCh06G003630.1 Cmo06g00363 383925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo06g00363 729 Gene3D - 35 270 - -
Cmo06g00363 729 Gene3D Phosphorylase Kinase; domain 1 346 459 - -
Cmo06g00363 729 MobiDBLite consensus disorder prediction 269 313 - -
Cmo06g00363 729 ProSitePatterns Serine/Threonine protein kinases active-site signature. 503 515 IPR008271 GO:0004672|GO:0006468
Cmo06g00363 729 Pfam Protein kinase domain 385 658 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo06g00363 729 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.2 22 708 - -
Cmo06g00363 729 ProSitePatterns Protein kinases ATP-binding region signature. 390 413 IPR017441 GO:0005524
Cmo06g00363 729 SMART serkin_6 384 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo06g00363 729 PANTHER - 22 708 - -
Cmo06g00363 729 CDD STKc_IRAK 390 660 - -
Cmo06g00363 729 CDD lectin_legume_LecRK_Arcelin_ConA 38 264 IPR001220 GO:0030246
Cmo06g00363 729 SUPERFAMILY Concanavalin A-like lectins/glucanases 36 267 IPR013320 -
Cmo06g00363 729 Pfam Legume lectin domain 39 265 IPR001220 GO:0030246
Cmo06g00363 729 ProSitePatterns Legume lectins beta-chain signature. 147 153 IPR019825 -
Cmo06g00363 729 ProSiteProfiles Protein kinase domain profile. 384 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo06g00363 729 SUPERFAMILY Protein kinase-like (PK-like) 366 689 IPR011009 -
Cmo06g00363 729 Gene3D Transferase(Phosphotransferase) domain 1 460 666 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo06g00363 Cmo14g00192 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo06g00363 Cmo-Chr6:1755274 Cmo16g01000 Cmo-Chr16:6893728 0 dispersed
Cmo14g00192 Cmo-Chr14:869864 Cmo06g00363 Cmo-Chr6:1755274 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74403 PF00069 Pkinase 1.20E-50 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo06g00363 - - cpep:111800252 1350.88