Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo06g00370 ATGGCAACTAGGGGTCAAGGTGGTATCCAACAATTGCTTGCAGCAGAGCAAGAAGCTCAACACATTGTCAATGCTGCCAGAAATGCAAAATTGGCTAGACTGAAACAAGCCAAAGAAGAGGCTGAAAAGGAAATTGCTGCTTACCGTGCCCAAGTGGAGGCTGAGTTCCAAAGAAAACTCTCTGAGAGTAGCGGGGATTCAGGAGCTAATGTTAAGCGGCTTGAAGTCGAGACAGATGCAAAGATTGCGCACCTGAAAGAAGAGTCTGCTAGAATTTCGTACGATGTCGTGGACATGCTCTTGAAGCATGTGACAACCGTGAAAAATTGA 330 46.06 MATRGQGGIQQLLAAEQEAQHIVNAARNAKLARLKQAKEEAEKEIAAYRAQVEAEFQRKLSESSGDSGANVKRLEVETDAKIAHLKEESARISYDVVDMLLKHVTTVKN 109
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1788887 1791642 - CmoCh06G003700.1 Cmo06g00370 383932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo06g00370 109 TIGRFAM V_ATP_synt_G: V-type ATPase, G subunit 1 108 IPR005124 GO:0016471|GO:0046961|GO:1902600
Cmo06g00370 109 Coils Coil 24 58 - -
Cmo06g00370 109 Pfam Vacuolar (H+)-ATPase G subunit 6 108 IPR005124 GO:0016471|GO:0046961|GO:1902600
Cmo06g00370 109 PANTHER V-TYPE PROTON ATPASE SUBUNIT G1 2 109 - -
Cmo06g00370 109 Gene3D - 1 109 - -
Cmo06g00370 109 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 2 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo06g00370 Cmo14g00199 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo06g00370 Cmo-Chr6:1788887 Cmo05g00134 Cmo-Chr5:584134 2.50E-09 dispersed
Cmo14g00199 Cmo-Chr14:901066 Cmo06g00370 Cmo-Chr6:1788887 3.76E-69 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo06g00370 K02152 - cmos:111461062 182.57