Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo06g00371 | ATGGCTAATAACGACATCGAAGTCGGATCTCGGGGGTCCCTGCCGAGGAAGGACTATTTCGAGCCGCTTCCGGCGCCAATGATCGATATGGAGGAGTTGGCCAAATGGTCCTTTTACAGAGCCATAATCGCCGAGTTCGTCGCCACTCTTTTGTTTCTCTACGTCGCCGTTTTGACGGTCATCGGTAATAAAACCCAGACCGATCCCCTCAACGGCGGTAACCTCTGCGGCGGAGTTGGCACCCTCGGAATCGCCTGGGTCTTCGGCGGTATGATCTTCGTTCTCGTTTACTGCACCGCCGGCATCTCTGGTAATTCCCTTATCTTCATTTTTCCCCAATTTTCAAAACCCGGAAAATTAACCGGAGGACACATAAACCCGGCGGTGACATTCGGAATGTTTCTGGGGAGAAAGATATCGTTGATTCGCGCCTTGCTCTACATTATAGCTCAGTGCTTGGGGGCGTTATGCGGCTGCGCCTTAGTCAAGTCACTACAGAGAGATCGCTACAACCACTATGGCGGTGCTGCCAACCAGCTCGTTGACGGCTACAGCAAAGGCACCGGTCTCGCCGTCGAGATCATCGGCACCTTCGTCCTTCTCTACACCGTCTTCTCCGCCACTGATCCCAAACGCAATGCCCGAGATTCCTACGTTCCTGTGCTGGCTCCACTCCCCATTGGGTTCACTGTTTTCATGGTTCATCTCGCTACAATTCCGATCACTGGCACTGGCATCAATCCAGCTCGAAGCTTCGGCGCCGCCGTGATCATCAACGATAAACAAATCTGGAAAGATCATTGGATCTTCTGGGTCGGACCGCTGATCGGAGCAACCATTGCTACGATGTATTACCAGTATGTTCTTCGAGCCTCCGCCGTGAAAGCAATTGGATCCTTCAGAAGCACACCACCAACGCGTTACTAA | 927 | 52.64 | MANNDIEVGSRGSLPRKDYFEPLPAPMIDMEELAKWSFYRAIIAEFVATLLFLYVAVLTVIGNKTQTDPLNGGNLCGGVGTLGIAWVFGGMIFVLVYCTAGISGNSLIFIFPQFSKPGKLTGGHINPAVTFGMFLGRKISLIRALLYIIAQCLGALCGCALVKSLQRDRYNHYGGAANQLVDGYSKGTGLAVEIIGTFVLLYTVFSATDPKRNARDSYVPVLAPLPIGFTVFMVHLATIPITGTGINPARSFGAAVIINDKQIWKDHWIFWVGPLIGATIATMYYQYVLRASAVKAIGSFRSTPPTRY | 308 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 1792397 | 1793423 | - | CmoCh06G003710.1 | Cmo06g00371 | 383933 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo06g00371 | 308 | PANTHER | AQUAPORIN OR AQUAGLYCEROPORIN RELATED | 119 | 303 | IPR034294 | - | |
Cmo06g00371 | 308 | PANTHER | AQUAPORIN OR AQUAGLYCEROPORIN RELATED | 6 | 105 | IPR034294 | - | |
Cmo06g00371 | 308 | PANTHER | AQUAPORIN PIP2-4-RELATED | 119 | 303 | - | - | |
Cmo06g00371 | 308 | PANTHER | AQUAPORIN PIP2-4-RELATED | 6 | 105 | - | - | |
Cmo06g00371 | 308 | SUPERFAMILY | Aquaporin-like | 31 | 290 | IPR023271 | - | |
Cmo06g00371 | 308 | TIGRFAM | MIP: MIP family channel proteins | 117 | 285 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo06g00371 | 308 | PRINTS | Major intrinsic protein family signature | 40 | 59 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo06g00371 | 308 | PRINTS | Major intrinsic protein family signature | 106 | 130 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo06g00371 | 308 | PRINTS | Major intrinsic protein family signature | 228 | 250 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo06g00371 | 308 | PRINTS | Major intrinsic protein family signature | 268 | 288 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo06g00371 | 308 | PRINTS | Major intrinsic protein family signature | 143 | 162 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo06g00371 | 308 | PRINTS | Major intrinsic protein family signature | 192 | 210 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo06g00371 | 308 | Gene3D | Glycerol uptake facilitator protein. | 25 | 306 | IPR023271 | - | |
Cmo06g00371 | 308 | CDD | MIP | 40 | 288 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo06g00371 | 308 | ProSitePatterns | MIP family signature. | 124 | 132 | IPR022357 | - | |
Cmo06g00371 | 308 | Pfam | Major intrinsic protein | 33 | 285 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo06g00371 | Cmo-Chr6:1792397 | Cmo07g00973 | Cmo-Chr7:4770232 | 6.83E-154 | dispersed | |
Cmo02g00893 | Cmo-Chr2:5507658 | Cmo06g00371 | Cmo-Chr6:1792397 | 1.04E-145 | wgd | |
Cmo03g01239 | Cmo-Chr3:9556212 | Cmo06g00371 | Cmo-Chr6:1792397 | 4.19E-154 | wgd | |
Cmo04g01442 | Cmo-Chr4:7380649 | Cmo06g00371 | Cmo-Chr6:1792397 | 5.38E-145 | wgd | |
Cmo06g00371 | Cmo-Chr6:1792397 | Cmo07g00971 | Cmo-Chr7:4762813 | 1.53E-140 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo06g00371 | K09872 | - | csv:101214142 | 509.99 |