Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo06g00393 ATGGCCGCCTCTAATCCCTCCACCGTCCACCCCATCTGGTACCAGTTCCTTCTCGGCCGGTGGTTCTCCGTTTTCGCTTCCATTCTCATCATGTCAGTCTCCGGCGCTACCTACATGTTCGGTCTCTACTCCTCCGATATCAAATCCTCCTTAGGCTACGACCAAACCACCCTTAATTTGCTTAGTTTCTTCAAGGATTTAGGCGGCAACGTCGGCGTTATCGGCGGTCTAATCAACGAGGTCGCGCCGCCTTGGGTCGTTCTCCTGATCGGCGCCGTCATGAATCTCTTCGGCTACACCATGATTTGGATGGCTGTAACTAGCCGGATCCCAAAGCCCCAAATCTGGCATATGTGTCTCTACATTTGTATCGGAGCTAATTCTCAGACATTCGCTAACACAGGGGCTCTCGTTACTAGCGTCAAGAACTTCCCGGAAAGTCGCGGCAGCGTTTTGGGCCTTTTGAAGGGCTTTGTCGGGTTGAGCGGCGCCATTTTGACCCAGCTTTACCATGCCTTTTATGGCAACAATTCCAAATCTCTCATCCTTTTAATCGCTTGGCTTCCGGCCGCCGTCTCTGTTACTTTCCTCCGTTTCGTTCGACTCATTAAGGATCTCCGGCAGCCGAATGAGCTCAGAGTCTTCTTCCATATCCTTTATATTTCTCTTGGCCTTGCTGGGTCGTTAATGGTTTTGATTATTCTGCAAAATCGCCTGAAATTTCATCAAATGGAATACGCCGGAAGTGCCATTGTTGTCATTGCTCTGCTTTTACTTCCTCTGGCCATCGTTTACAGAGAGGAATTGAGTGTTTGGAAGACTAAAATCGAAAGCCCACTTTCGCAATTAGAGTTAGCATCTCAACAACAGCCGCCGCCACTGACCTCGGCGGCGCCAGTGGCGCCGCCGAGTCCTCCGTCGGGTTCCTGCTTTGAAAATACATTCAAACCCCCAAACAGAGGAGAGGACTACACAATTCCGCAAGCTGTTTTCAGTATAGATATGATAATCCTCTTCATCGCCACCATCTGCGGCGTCGGTGGAACATTGACAGCGATCGACAATTTGGGTCAAATCGGAGAGTCTTTGAGATACCCATCTCAGAGCACCACCACATTCATCTCTCTCGTCAGCATATGGAATTACCTTGGCCGTGTAGTCGCCGGATTCTTGTCGGAATTTCTCTGGAAAAAATACAAAGTCCCGCGTCCGTTAATTTTCTTCGTAACAATGATTCTATCCTGCGTCGGTCATCTTCTAATCGCATTCGGAGTTCCAAATTCGCTCTATTTTTCTTCAATTATCATCGGATTCTGCTTCGGCGCACAGTGGCCGTTGATTTTCGCAATCATATCGGAAATTTTCGGGCTGAAGTACTACGCAACTCTGTACAACTTGGGGGGAGTGGCGAGCCCGATTGGAGCTTATATACTGAACGTGAGAGTGGCCGGACATTTGTACGACAGAGAGGCAACGCGGCAGATGGAGGCGGCGGGGCGGCGGCGAAATATTGGGGAGGATTTGAATTGCTTGGGAGTGGAATGTTACAGAAAGGCGTTTCTTATAATCACGGCGGCTACTGTTTTAGGGGCGTTTGTTTCGTTGATCTTGGTGGTTCGGACATGGAAGTTTTATAAGGGCGATATTTACCGGAAGTTCAGGGAGGAAGCAGGTGAGGAGGTGGAGGTGCAAATGGCGGCTCCGACGAACAGTGCGGTGGCGAAAAGTCAAACTGCTTAG 1740 49.66 MAASNPSTVHPIWYQFLLGRWFSVFASILIMSVSGATYMFGLYSSDIKSSLGYDQTTLNLLSFFKDLGGNVGVIGGLINEVAPPWVVLLIGAVMNLFGYTMIWMAVTSRIPKPQIWHMCLYICIGANSQTFANTGALVTSVKNFPESRGSVLGLLKGFVGLSGAILTQLYHAFYGNNSKSLILLIAWLPAAVSVTFLRFVRLIKDLRQPNELRVFFHILYISLGLAGSLMVLIILQNRLKFHQMEYAGSAIVVIALLLLPLAIVYREELSVWKTKIESPLSQLELASQQQPPPLTSAAPVAPPSPPSGSCFENTFKPPNRGEDYTIPQAVFSIDMIILFIATICGVGGTLTAIDNLGQIGESLRYPSQSTTTFISLVSIWNYLGRVVAGFLSEFLWKKYKVPRPLIFFVTMILSCVGHLLIAFGVPNSLYFSSIIIGFCFGAQWPLIFAIISEIFGLKYYATLYNLGGVASPIGAYILNVRVAGHLYDREATRQMEAAGRRRNIGEDLNCLGVECYRKAFLIITAATVLGAFVSLILVVRTWKFYKGDIYRKFREEAGEEVEVQMAAPTNSAVAKSQTA 579
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1920809 1922548 + CmoCh06G003930.1 Cmo06g00393 383955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo06g00393 579 MobiDBLite consensus disorder prediction 290 309 - -
Cmo06g00393 579 CDD MFS_Mch1p_like 19 531 - -
Cmo06g00393 579 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 9 572 - -
Cmo06g00393 579 PANTHER MFS TRANSPORTER 9 572 - -
Cmo06g00393 579 SUPERFAMILY MFS general substrate transporter 24 546 IPR036259 -
Cmo06g00393 579 Gene3D MFS general substrate transporter like domains 308 544 IPR036259 -
Cmo06g00393 579 Pfam Nodulin-like 20 264 IPR010658 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo06g00393 Cmo-Chr6:1920809 Cmo18g00914 Cmo-Chr18:10319980 0 dispersed
Cmo11g00140 Cmo-Chr11:705347 Cmo06g00393 Cmo-Chr6:1920809 8.59E-106 dispersed
Cmo03g01199 Cmo-Chr3:9357600 Cmo06g00393 Cmo-Chr6:1920809 0 wgd
Cmo04g01463 Cmo-Chr4:7484058 Cmo06g00393 Cmo-Chr6:1920809 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo06g00393 - - csv:101216551 947.192