Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo06g00413 ATGGTGGTCGGAAAGGAAAATCCGCCGATGGAGAAAGAATCCGCCAACACCGTTGCCGGAAGCGAGAGTCATAAAAGAGCGAGGCTAGCCATACTAGAGCTCGCGAACATGATCAGCGTTCCGATGTCCCTCAATGCCGTCGTCCGTCTCAACATCGCCGACGCTATCTGGCAAGGAGGTTCCAATTTTCCGCTCTCCGCTTCTGAGATCCTCGCACGCGTGGTTCCATCCGGTGGCGACGCCGATAATCTCGAGCGAATCCTCCGTATGCTCACTAGCTACGGCGTTTTCGAAGAGCATCTCAACCCTAACTCGTCGGACCGCCGTTATTCCCTCACCGACGTAGGAAAAACTCTGGTCACCGATTCCGATGGCCTCTCTTACGCGTCGTACGTGCTTCAGCATCATCAGGACGCGCTTATGAGAGCGTGGCCAAGAGTGCACGAGGCTGCGATTGACGCTAGTACGGAGCCGTTTGTCAGAGCTAATGGCGAAGCAGCGTACAGTTACTACGGGAAGAATGAGGAAATGAACTTGTTAATGCAGAGAGCGATGGCCGGCGTATCAGTGCCGTTCATGAAGGCTGTATTGGACGGCTACGATGGCTTCGGAGGCGTGGAGAAATTGGTCGACGTCGGCGGCAGCGCCGGTGATTGCTTGAGGATGATCTTACAGAAATATCCTCACATTAAGGAAGGAATCAATTTCGATCTGCCGGAAGTGGTGGCTAGGGCTCCCAGCATCCCCGGGGTGACTCACGTTGGAGGCGACATGTTCAAGTCCGTCCCCACCGGTGACGCTATTTTCATGAAGTGGGTTCTGTCAACATGGACGGATGATGAATGCAAGATGATATTGGAGAACTGCTGCAAGTCTCTCCCGGCGGGAGGGAAACTGATCGCCTGCGAGCCGACGGTGCCTGAGAAGACGGACGACAGCCACCGGACACGTGCCCTCTTGGCCAACGACGTATTCATCATGACCATTTACAGTGCCAAAAGCAAGCAGAGGACTGAGGATCAGTTCCGGCAGCTGGGCCTCTCCGTCGGCTTCTCCGCCCTGCGCTCATTCCACGTGGATTACTTCTATTGTGTGTTGGAATTCGAGAAGTGA 1113 54.81 MVVGKENPPMEKESANTVAGSESHKRARLAILELANMISVPMSLNAVVRLNIADAIWQGGSNFPLSASEILARVVPSGGDADNLERILRMLTSYGVFEEHLNPNSSDRRYSLTDVGKTLVTDSDGLSYASYVLQHHQDALMRAWPRVHEAAIDASTEPFVRANGEAAYSYYGKNEEMNLLMQRAMAGVSVPFMKAVLDGYDGFGGVEKLVDVGGSAGDCLRMILQKYPHIKEGINFDLPEVVARAPSIPGVTHVGGDMFKSVPTGDAIFMKWVLSTWTDDECKMILENCCKSLPAGGKLIACEPTVPEKTDDSHRTRALLANDVFIMTIYSAKSKQRTEDQFRQLGLSVGFSALRSFHVDYFYCVLEFEK 370
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1987121 1989776 - CmoCh06G004130.1 Cmo06g00413 383975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo06g00413 370 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 124 368 IPR029063 -
Cmo06g00413 370 Gene3D - 13 124 IPR036388 -
Cmo06g00413 370 PIRSF O-mtase 9 370 IPR016461 GO:0008168
Cmo06g00413 370 MobiDBLite consensus disorder prediction 1 21 - -
Cmo06g00413 370 SUPERFAMILY Winged helix DNA-binding domain 23 122 IPR036390 -
Cmo06g00413 370 Gene3D Vaccinia Virus protein VP39 125 370 IPR029063 -
Cmo06g00413 370 PANTHER OS02G0823400 PROTEIN 19 369 - -
Cmo06g00413 370 Pfam O-methyltransferase domain 150 352 IPR001077 GO:0008171
Cmo06g00413 370 PANTHER O-METHYLTRANSFERASE 19 369 IPR016461 GO:0008168
Cmo06g00413 370 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 32 370 IPR016461 GO:0008168
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo06g00413 Cmo-Chr6:1987121 Cmo18g01376 Cmo-Chr18:12845400 1.40E-81 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo06g00413 - - csv:101205175 664.07