Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo06g00421 ATGGGTACTCATGGCCGAAGCAGTGAGAGAAAGAAAGAGAAGACGTCATCTTCGAGGAGACGAAGCAGAAGAAGGTCTGACGACTCTGAATCTGATTCCGACGACTCAGATAGCCGGGATTCATCTCCAGTGGCGAGCTCCCGGAAGCGCAGGGAAAGACGCGGTGGTAGCAGGAGTAGTCACCGGAGTAGACGAAGGAGCTCCTCTCGTGGGCGGGATTCTGGAGACGATAGTTCGAATGATAGTTATGGCAGCGATGATGGTGGTCGCAAGAAGAGTAAGTCTTCCAGGAAAGTCACTGAAGAGGAAATTAGCGAATACTTGGCCAAGAAAGCGCAGAAAAAGGCCTTGCGAGTTGCCAAGAAATTGAAGTCCCAGACGGTTTCTGGTTATTCCAACGATTCGAATCCATTCGGCGATTCCAATCTCAATGAAAAATTTGTATGGCGAAAGAAAATTGAGCGTGATGTTACTCAAGGCGTGTCGCTTGATGCCTTTTCAATGAAGTCCGAGAAAAAAAGACAGAGAGAAAGAATGGCAGAGATTGAAAAGGTGAAGAAAAGGAGGGAGGAAAGGGCTCTTGAAAAAGCACAACATGAGGAAGAAATGGCATTGCTAGCTAGAGAACGTGCTCGTGCTGAATTTCAGGATTGGGAGAAAAAGGAAGAAGAGGTATTCCATTTTGATCAAAGCAAAATCAGATCAGAGATAAGAGTTCGTGATGGGCGTTCGAAGCCTATTGATATTCTATCCAAGCAACTGAATGGATCGGATGATTTTGATATAGTAATCAATGAGCCATACACTGTATTCAAGGGCTTGACTGTGAAAGAAATGGAAGAGCTTCGTGATGACATCAAAATGCATCTTGATCTGGACAGGGCGACGCCTACACATATCGAGTATTGGGAGGCACTTCTCGTAGTTTGTGATTGGGAACTAGCTGAAGCTCGAAAAAAGGATGCTCTGGATAGAGCCAGAGTTCGTGGTGAGGAGCCTCCTGCTGAGTTGCTTGCAGAAGAAAGGGGTCTGCATTCTAGCATTGAAACAGATGTCAAAAATCTTCTGGAAGGAAAGACTTATGGTGAATTGGAGGCATTACAATCTCAGATTGAGTCACAGATGCGATCTGGAACTGCAAAGGTGGTTGAGTACTGGGAGGCTGTAATAAAGCGCCTTCATATATACAAGGCCAAGGCTTGCTTGAAGGAGATTCATACGAAAAAACTGCATGAGCATCTTGTACGCCTTGAGCAGCCTTTCGAGGATGATGAAGAAAAGGTGGACCAGGAAATCGAGATGGAAACTGAACGCTCTTTACAAGTGAAAGCTGAAGAGGAAGAGCTTGATATTAGAGCGGAAACATATTCGCCTGATCTCCTTGAGGAAGAAGAGAATGAAGAAGCTGGATCATTTTCACCGGAACTTATTCATGGTGATGAAGATGAACAGGCGATTGATCCTGAGGAGGATAGGGCCATACTGGAACGTAAACGAATTGCTGTCTTGGAAGAACAGCAGAGACGGATTCAAGAAGCAATGGCCACAAAACCTGCTCCACCAGAGGATAATTTTGAGCTTAAAGCCTCAAAAGCAATGGGAGTCATGGAGGAAGGCGATGCAGTTTTTGGATCTGGTGCTGAAGTGAACCTGGATTCACAGGTATATTGGTGGCATGACAAATATCGTCCAAGAAAACCGAAATATTTCAATCGGGTTCACACAGGATACGAGTGGAACAAATACAACCAGACTCACTATGATCATGACAATCCACCTCCAAAGATTGTCCAAGGATATAAGTTTAACATCTTCTATCCAGACCTTGTTGACAAGACAAAAGCTCCAACTTACACCATTGAAAAGGATGGAAACAGCAGCGAGACATGTATCATAAGGTTCCACGCGGGGCCACCGTATGAGGATATTGCGTTTCGAATTGTAAACAAAGAATGGGAGTACTCTCATAAGAAGGGGTTTAAGTGCACATTTGAGCGTGGTATTTTGCACGTATACTTCAACTTTAAGCGATATCGTTATCGCAGGTAA 2049 44.66 MGTHGRSSERKKEKTSSSRRRSRRRSDDSESDSDDSDSRDSSPVASSRKRRERRGGSRSSHRSRRRSSSRGRDSGDDSSNDSYGSDDGGRKKSKSSRKVTEEEISEYLAKKAQKKALRVAKKLKSQTVSGYSNDSNPFGDSNLNEKFVWRKKIERDVTQGVSLDAFSMKSEKKRQRERMAEIEKVKKRREERALEKAQHEEEMALLARERARAEFQDWEKKEEEVFHFDQSKIRSEIRVRDGRSKPIDILSKQLNGSDDFDIVINEPYTVFKGLTVKEMEELRDDIKMHLDLDRATPTHIEYWEALLVVCDWELAEARKKDALDRARVRGEEPPAELLAEERGLHSSIETDVKNLLEGKTYGELEALQSQIESQMRSGTAKVVEYWEAVIKRLHIYKAKACLKEIHTKKLHEHLVRLEQPFEDDEEKVDQEIEMETERSLQVKAEEEELDIRAETYSPDLLEEEENEEAGSFSPELIHGDEDEQAIDPEEDRAILERKRIAVLEEQQRRIQEAMATKPAPPEDNFELKASKAMGVMEEGDAVFGSGAEVNLDSQVYWWHDKYRPRKPKYFNRVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKTKAPTYTIEKDGNSSETCIIRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILHVYFNFKRYRYRR 682
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2023919 2030074 + CmoCh06G004210.1 Cmo06g00421 383983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo06g00421 682 MobiDBLite consensus disorder prediction 1 142 - -
Cmo06g00421 682 Pfam Conserved mid region of cactin 208 406 IPR018816 -
Cmo06g00421 682 Pfam Cactus-binding C-terminus of cactin protein 558 682 IPR019134 GO:0005515
Cmo06g00421 682 SMART CactinC_cactus_3 558 682 - -
Cmo06g00421 682 MobiDBLite consensus disorder prediction 125 142 - -
Cmo06g00421 682 MobiDBLite consensus disorder prediction 69 113 - -
Cmo06g00421 682 MobiDBLite consensus disorder prediction 51 68 - -
Cmo06g00421 682 Coils Coil 172 216 - -
Cmo06g00421 682 PANTHER BNAC05G02180D PROTEIN 1 682 - -
Cmo06g00421 682 MobiDBLite consensus disorder prediction 1 50 - -
Cmo06g00421 682 PANTHER POLYGLUTAMINE BINDING PROTEIN 1/MARVEL MEMBRANE-ASSOCIATING DOMAIN CONTAINING 3 1 682 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo06g00421 K25058 - csv:101205416 1107.43