Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo06g00432 ATGGTGACGATGATGGTGAAGGAGAAGATGGAGGTGAAGATTTTCAGTTCCGCCATAGCTTTTCTTCTCTGCATTACCCTTTTGATTTCACCTTCTCTCTGTTTAGATGATACTTCTGCTCTGATTCGCTTTCGTCTTCAAGCTGATTCCCATGGCGGCCTCCTCGGAAACTGGACTGGTTCTGATGCTTGTGGTTCTTCATGGCGGGGAGTTCAGTGCTCTGTTAATGGCCGCGTTATCGCTCTTTCTCTTCCTTCTATGAACTTGCGTGGCCCCATTGAGTCTTTAGCGCCGCTCGATCAGCTCCGTGTACTCGACCTCCATGACAACCGTTTGAACGGAACCATTTCGCCGATTGTGAACTGTACGAATCTCAAGCTGTTGTATCTCTCTGGCAATGACTTCTCCGGCGAGATTCCGCCGGGATTCTCGTCTCTTAGACGACTTCTCCGACTGGATTTGTCTGATAACAACATTCGCGGCGGAATTCCTGAGGATCTCTCGAAATTGTCTCGACTTCTTACTCTCCGTTTGCAGAATAATGTCCTCTCCGGTACGGTTCCCGATCTCTCTGTTTCGCTTGTGAATCTTACTGAAGTTAATTTAACCAACAATGAACTGTACGGACGGTTACCTGACGGGATGGTGAAGAAATTCGGCGAGGAGAGTTTCGCTGGTAACGAAGGGGTCTGTGGATCGAGTCCTTTACCGATCTGTTCAGTTACTAGTTCACCGCCGGCGTCGGATTCCGGCAGAACGGTACCATCAAATCCAATCTCAATACCGAAAAACCCTAATATCAGTCCGAACATTAAGGAATCGCGAAAAGGGCTCAGCCCTGGCGCGATTGTTGCGATTGTGATCGCAAACTGCGTTGCGTTGCTCGTGATTATCTCCTTCGTCGTCGCGTATTACTGCGCTCGTGACCGGAGCTCGAGTTCCATGGCGGGAAGCGACAATGGGAAGAGAAGAAAGAGCGGAAGTAGCTACGGAAGCGAGAAAAGAGTCTACGCCAATGGCGGTGGCGACAGTGACAGTACTAACGCTACAGATAGAAGCAAACTGGTGTTCTTCGATTGGAAGAAGCAATTCGAGCTTGAAGATTTGCTGAGAGCTTCGGCGGAGATGCTCGGAAAAGGAAGCTTGGGGACGGTATACAGGGCGGTACTCGACGACGGTTGTACAGTGGCGGTGAAGAGATTGAAGGATGCAAATCCATGTCCGAGGAAGGATTTTGAACAGTACATGGATGTGATTGGAAAGCTGAAACATCAAAATATCGTTAGATTGAGAGCTTTTTACTATGCTAAAGAAGAAAAGCTTCTGGTTTACGATTATCTTCCTAATGGAAGCTTGCATTCTCTTCTCCATGGTAATCGAGGTCCAGGAAGGATTCCATTGGATTGGACGACGAGAATCAGTTTGCTTTTGGGTGCTGCTCGTGGTCTAGCAAGAATCCATGGAGAATACAGTGCTTCAAAGATCCCCCATGGCAATGTCAAGTCTTCTAACGTTCTTCTTGACAAAAATGGAGTTGCTTGCATTTCTGATTTTGGGTTGTCTCTCCTCCTCAATCCTGTCCACGCCATTGCTAGGTTGGGAGGCTACAAGGCCCCGGAACAGGACGAGACAAAACGACTCTCTCAAAAGGCAGATGTCTATAGCTTTGGTGTCTTGATGCTAGAAGTCTTGACCGGACGTGCACCATCGCTTTACCCATCGCCTTTGAACTCACGAAACGACGAGCAAGAGCAAGCAGTAGATCTCCCGAATTGGGTTCGATCCGTGGTGAAAGAAGAGTGGACGGCTGAGGTGTTTGATCCCGAGCTATTACGGTACAAGAACATTGAGGAGGAGCTTGTGTCAATGCTTCATGTTGGGTTGGCTTGCGTTCTTCCTCAGCCTGAGAAGAGACCGACGATGGTAGAAGTGGCAAAGATGATCGAAGATATCAGGGTCGAGCAATCCCCGCTCGGAGAAGATTACGACGAATCACGTAATTCGCTTTCGCCTTCCCTTGGAACCACAGAAGATGGTATGGTGTAG 2046 48.58 MVTMMVKEKMEVKIFSSAIAFLLCITLLISPSLCLDDTSALIRFRLQADSHGGLLGNWTGSDACGSSWRGVQCSVNGRVIALSLPSMNLRGPIESLAPLDQLRVLDLHDNRLNGTISPIVNCTNLKLLYLSGNDFSGEIPPGFSSLRRLLRLDLSDNNIRGGIPEDLSKLSRLLTLRLQNNVLSGTVPDLSVSLVNLTEVNLTNNELYGRLPDGMVKKFGEESFAGNEGVCGSSPLPICSVTSSPPASDSGRTVPSNPISIPKNPNISPNIKESRKGLSPGAIVAIVIANCVALLVIISFVVAYYCARDRSSSSMAGSDNGKRRKSGSSYGSEKRVYANGGGDSDSTNATDRSKLVFFDWKKQFELEDLLRASAEMLGKGSLGTVYRAVLDDGCTVAVKRLKDANPCPRKDFEQYMDVIGKLKHQNIVRLRAFYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLLLGAARGLARIHGEYSASKIPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVHAIARLGGYKAPEQDETKRLSQKADVYSFGVLMLEVLTGRAPSLYPSPLNSRNDEQEQAVDLPNWVRSVVKEEWTAEVFDPELLRYKNIEEELVSMLHVGLACVLPQPEKRPTMVEVAKMIEDIRVEQSPLGEDYDESRNSLSPSLGTTEDGMV 681
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2078694 2081607 - CmoCh06G004320.1 Cmo06g00432 383994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo06g00432 681 Pfam Leucine Rich repeats (2 copies) 101 136 IPR025875 -
Cmo06g00432 681 Gene3D Phosphorylase Kinase; domain 1 342 446 - -
Cmo06g00432 681 Gene3D Ribonuclease Inhibitor 145 244 IPR032675 -
Cmo06g00432 681 MobiDBLite consensus disorder prediction 311 325 - -
Cmo06g00432 681 MobiDBLite consensus disorder prediction 311 345 - -
Cmo06g00432 681 CDD STKc_IRAK 377 651 - -
Cmo06g00432 681 Pfam Protein kinase domain 375 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo06g00432 681 PANTHER LRR RECEPTOR-LIKE KINASE 17 672 - -
Cmo06g00432 681 MobiDBLite consensus disorder prediction 656 681 - -
Cmo06g00432 681 Pfam Leucine rich repeat N-terminal domain 36 74 IPR013210 -
Cmo06g00432 681 SUPERFAMILY L domain-like 35 215 - -
Cmo06g00432 681 MobiDBLite consensus disorder prediction 242 272 - -
Cmo06g00432 681 Gene3D Ribonuclease Inhibitor 36 144 IPR032675 -
Cmo06g00432 681 SUPERFAMILY Protein kinase-like (PK-like) 375 648 IPR011009 -
Cmo06g00432 681 ProSiteProfiles Protein kinase domain profile. 371 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo06g00432 681 Gene3D Transferase(Phosphotransferase) domain 1 447 669 - -
Cmo06g00432 681 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 17 672 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo06g00432 Cmo14g00252 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g01567 Cmo-Chr4:8011158 Cmo06g00432 Cmo-Chr6:2078694 4.89E-177 dispersed
Cmo06g00432 Cmo-Chr6:2078694 Cmo18g01016 Cmo-Chr18:10990716 9.17E-177 dispersed
Cmo14g00252 Cmo-Chr14:1156523 Cmo06g00432 Cmo-Chr6:2078694 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74405 PF00069 Pkinase 8.60E-33 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo06g00432 - - csv:101206843 1158.28