Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo06g00452 | ATGGATGATCAATATTCCCTTTCCGATCTCCGCCACCTCATCACTGCCCCGCCTCGCTCTCATTTCCCTTCTTCCTCAATTCCCCACCACGATCTTGCTTCTACCGCCTTTCGCCACCACCATACCCCCTATGATCTCATTCGCTCTCAACCCACCACCGTCCTTGGTTCCGCTTCCCCTACTAGCTTCGATGCTCAAACCACCACCGCTCGGTGGCCTCGCCAAGAGACTCTCACTCTCTTGGATGTCAGATCCCGCCTCGATTCTAAGTTTAAAGAAGCTAACCAAAAAGGACCCCTTTGGGATGAAGTTTCTAGAATTATGGCTGAGGAACACAATTATCAAAGAAGTGGAAAGAAATGCAGAGAGAAGTTTGAGAATTTATATAAATATTACAAAAAAACAAAGGATGGCAAAGCTGGAAGACAAGATGGCAAAAACTACAGATTCTTCAGGCAGCTTGAAGCTCTCTATGGTGAAACCAGCAATGCCACTTCACTTCCAGACTCCCATTTTGTTGGAGATGGCAACCTTATATTCCAACAAGATGGGACTAGTAATCCAACCTCCGGTCACATGAGCTATGATGCTCAGCTGAAGCACTACTGCGACAGTCTCAGCCTCTCGAACACGTCCGAGTTTGAAACCTCTGTGTCGTCCGATGGTAATGACGAGTTTGGTTCGGTCAATGATTCGGTGGAGAAGAGGAAGAGGCGAGCTGGGAAATGCTGGAAGGTGAAGATCAAGCAGTTCATTGGCTTGCAAATGAGGAAGCTAATTGATAAGCAAGAGGCTGGGTTGGAGAAGCTCATGAAGACTCTTGAACAAAAGGAGAAGGCAAGAATGGTATGGGAAGAGGAATGGAGGAAACAAGAAGTGTCAAGAATTGAGAGAGAAAGAAGCTTTTGGGCAAAGGAGAGAGCATGGATAGAAGCTAGAGATGCAGCGTTAATGGAGGCATTACAAAAGCTAACAGGCAAAGAGTTAATCACCGCCGAGCCTCATCAAAATGAAGATGGTAGTGAGATACTCAACAATTACCAAACAAAAACAATGGATCAAACCAACAAGAAACGCAAGGACAATTCAAGATCACCCACCACAACCTACAATCTTTACTTCCAAACTGATTCCTCCGTCTACGGCGGCGGTGGTCGTGGCGCCGAGATGAAAGAACAAAGTCCGAACAGCTCGAACGCCGGGGGCAGTGGCGGTGGCAGCCAAGTGGTGCAAGATAGCTGCTTTTTCTTGATGGGTGAAGGAGATCAATCTCAATCTGCTCCCAACAGCTTTCTTTAG | 1299 | 46.96 | MDDQYSLSDLRHLITAPPRSHFPSSSIPHHDLASTAFRHHHTPYDLIRSQPTTVLGSASPTSFDAQTTTARWPRQETLTLLDVRSRLDSKFKEANQKGPLWDEVSRIMAEEHNYQRSGKKCREKFENLYKYYKKTKDGKAGRQDGKNYRFFRQLEALYGETSNATSLPDSHFVGDGNLIFQQDGTSNPTSGHMSYDAQLKHYCDSLSLSNTSEFETSVSSDGNDEFGSVNDSVEKRKRRAGKCWKVKIKQFIGLQMRKLIDKQEAGLEKLMKTLEQKEKARMVWEEEWRKQEVSRIERERSFWAKERAWIEARDAALMEALQKLTGKELITAEPHQNEDGSEILNNYQTKTMDQTNKKRKDNSRSPTTTYNLYFQTDSSVYGGGGRGAEMKEQSPNSSNAGGSGGGSQVVQDSCFFLMGEGDQSQSAPNSFL | 432 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 2157372 | 2161559 | - | CmoCh06G004520.1 | Cmo06g00452 | 384014 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo06g00452 | 432 | ProSiteProfiles | Myb-like domain profile. | 64 | 129 | IPR001005 | - | |
Cmo06g00452 | 432 | MobiDBLite | consensus disorder prediction | 381 | 407 | - | - | |
Cmo06g00452 | 432 | MobiDBLite | consensus disorder prediction | 418 | 432 | - | - | |
Cmo06g00452 | 432 | PANTHER | TRIHELIX TRANSCRIPTION FACTOR PTL | 342 | 426 | - | - | |
Cmo06g00452 | 432 | Gene3D | - | 72 | 134 | - | - | |
Cmo06g00452 | 432 | PANTHER | - | 60 | 337 | - | - | |
Cmo06g00452 | 432 | MobiDBLite | consensus disorder prediction | 413 | 432 | - | - | |
Cmo06g00452 | 432 | PANTHER | - | 342 | 426 | - | - | |
Cmo06g00452 | 432 | CDD | GT1 | 71 | 136 | - | - | |
Cmo06g00452 | 432 | PANTHER | TRIHELIX TRANSCRIPTION FACTOR PTL | 60 | 337 | - | - | |
Cmo06g00452 | 432 | MobiDBLite | consensus disorder prediction | 391 | 407 | - | - | |
Cmo06g00452 | 432 | Coils | Coil | 260 | 287 | - | - | |
Cmo06g00452 | 432 | MobiDBLite | consensus disorder prediction | 348 | 369 | - | - | |
Cmo06g00452 | 432 | Pfam | Myb/SANT-like DNA-binding domain | 71 | 157 | IPR044822 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo06g00452 | Cmo14g00274 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo06g00452 | Cmo-Chr6:2157372 | Cmo18g00936 | Cmo-Chr18:10531114 | 4.34E-74 | dispersed | |
Cmo14g00274 | Cmo-Chr14:1239386 | Cmo06g00452 | Cmo-Chr6:2157372 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
9929 | PF13837 | Myb_DNA-bind_4 | 3.30E-19 | CL0123 | Cmo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo06g00452 | - | - | cmax:111498734 | 807.364 |