Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo06g00592 ATGGGAAGGATGGGAGGTCGGCAAAGGACTTACAGCGCCAATTCCACCGATTATAAGCTTCTTGAAGAGATTGGTTATGGTGCTAGTGCCACGGTTTTTCGAGCGATCTATACTCCGTCCAATGAAGTTGTTGCCATTAAGTGTTTGGATCTTGATCGCTGTAATAGTAATCTAGATGATATACGTAGGGAGGCTCAAACAATGAGTTTGATAGATCATCCAAACCTCGTAAGGGCTTATTGTTCATTTGTTGTTGACCGAAACCTTTGGGTTGTCATGCCATTCATGGCAGAGGGTTCTTGTTTGCACCTAATTAAGACAGCATACTCAGATGGCTTTGAAGAGGTTGCTATTGGTTCTGTCCTGAAAGAAACTCTTAAAGCCTTGGAGTACCTTCATCGACAAGGACACATACATCGGGATGTGAAGGCTGGAAATATACTACTCGATGGTAATGGGGCTGTGAAGCTTGCTGATTTTGGTGTTTCAGCTTGCATGTTTGATACAGGTGATAGACAGCGCTCCAGAAATACCTTTGTGGGAACCCCATGCTGGATGGCGCCCGAGGTATTGCAACCAGGAACGGGATATAATTCCAAGGCCGATATTTGGTCTTTTGGTATTACAGCATTGGAGTTGGCTCATGGTCATGCACCATTTTCAAAATATCCTCCAATGAAGGTGCTTCTTATGACCATACAAAATGCTCCTCCTGGGCTGGATTATGATAGGGATAAAAAGTTCTCTAAGTCTTTTAAAGAAATGGTTGCAATGTGCCTGGTGAAAGATCAATCCAAGAGGCCAACAGCTGAGAAACTTTTAAAGCACTCCTTTTTCAAGAATGCTAAGCCTCCAGAGCTTTCTTTGAAGAAATTATTTGCTGACTTGCCTCCTCTTTCACTTCGTGTGAAGGACCTGCTGCTTAAAGATGCTGCCCAGCTAGCCTTAAAGAAAATGCCTTCAGCAGAGCAAGAAGCATTATCACAGAGTGAGTACCAGCGAGGAGTTAGCGCATGGAAATTTGATGTTGAGGATTTGAAAGCCCAAGCTTCCCTGGTGAATGATGATATGGAAGAGATGATGGACGAGGAGGAGAATATAAATACTTGTCGTGTTAAGGATGCCTTTTGTTCTCAATCTAGTTTGAGGAATTTCAGTTCATGTAATGAATCATCTCAGGATGAACATGGAGTAGGGGCAAGTGGTCAGGGGTTGCCAAAAGCGGAGTGCTTGAACAAAAAGGGAAACTTTATGGAAGGTGATATGCTGAAAGCTGGGTTCCAAGAAACAACTGGATGGAAGAGAAATGGAACTAGCACTGAAACAGAAGCTTCTACATCTGGCCAAGACAGTGTACAAGGCAAAACCAAAACCCAAATGCCAAAAGGTCGTCAAACTCAAAGTGGTCCACTTCTACCTGGTACTGTGCTTAGTCATTCTTTATCAGAAAGAGTGCGAGGATCTGATAGGTTTGAATCTGAAATTCAACCATCTACTGAAAAAAATCGTCGAGAATCACGGCAAGCTCCAAGCTTCAGTGGTCCACTAATGCTGCCAAACCGTGCCTCAGCAAACAGCCTATCAGCTCCCATAAAACCTTCTGGAGGGTATAGAGATTCAATGGATGACAAATCAAAAGCTAATCTTGTGCAAATTAAGGGGCGTTTTTCAGTGACGTCAGAGAACCTAGATCTCGTAAAGGATATTCCATTGAGCATGGTTTCACGACGGTCTGCACAGAACTCACCTCTACGAAAGTCGGCTAGTGTTGGTGATTGGATATTTGATTCCAAGCAGTCTGTCAGCCAACCCCCCAAGGAGGCTTGCAACATCAACATGCCCACATCAATTCTTATGCCTCATCTTCAGAATCTTTTCCATCAGACCTCAATTCAACAGGATCTTATAGTGAACTTATTGAATAGCTTACAAACAGCAGACGTGGTTGATGCTACTCAAAATGGAAAGTTGCCTCCATTGCCTCGAAGTTTGGAGAATAATGGAAGTGCCGAAACAGCAGCGGTTGAGAGAGAGCGTTTACTGATGCGTAAAGTCTCTGAACTTCAAGCTAGAATGACGCATTTGACTTATGAGTTGACTTCTGAAAAGTTGAAATACATACAATTACAAGAGCAGTTCAACTCAGCATCTGGCCAGGAAGAAAACGAGATCAAGAGGGAAGAGAACCAATCAATTTTCTCCATCTGGTTCTTCAAGAGTTGGCATAATTCAAGATCAGTTGAGATCCCTGATCCAGAGTGGCCATCATTGCCAAAAAAACTCTCATATATTGCTCAGTGTGGCTTCTTCGTACATTTATCATTGTAG 2328 43.04 MGRMGGRQRTYSANSTDYKLLEEIGYGASATVFRAIYTPSNEVVAIKCLDLDRCNSNLDDIRREAQTMSLIDHPNLVRAYCSFVVDRNLWVVMPFMAEGSCLHLIKTAYSDGFEEVAIGSVLKETLKALEYLHRQGHIHRDVKAGNILLDGNGAVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGTGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQSKRPTAEKLLKHSFFKNAKPPELSLKKLFADLPPLSLRVKDLLLKDAAQLALKKMPSAEQEALSQSEYQRGVSAWKFDVEDLKAQASLVNDDMEEMMDEEENINTCRVKDAFCSQSSLRNFSSCNESSQDEHGVGASGQGLPKAECLNKKGNFMEGDMLKAGFQETTGWKRNGTSTETEASTSGQDSVQGKTKTQMPKGRQTQSGPLLPGTVLSHSLSERVRGSDRFESEIQPSTEKNRRESRQAPSFSGPLMLPNRASANSLSAPIKPSGGYRDSMDDKSKANLVQIKGRFSVTSENLDLVKDIPLSMVSRRSAQNSPLRKSASVGDWIFDSKQSVSQPPKEACNINMPTSILMPHLQNLFHQTSIQQDLIVNLLNSLQTADVVDATQNGKLPPLPRSLENNGSAETAAVERERLLMRKVSELQARMTHLTYELTSEKLKYIQLQEQFNSASGQEENEIKREENQSIFSIWFFKSWHNSRSVEIPDPEWPSLPKKLSYIAQCGFFVHLSL 775
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2913131 2927250 + CmoCh06G005920.1 Cmo06g00592 384154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo06g00592 775 CDD STKc_OSR1_SPAK 17 279 - -
Cmo06g00592 775 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 3 722 - -
Cmo06g00592 775 Pfam Protein kinase domain 18 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo06g00592 775 SUPERFAMILY Protein kinase-like (PK-like) 17 333 IPR011009 -
Cmo06g00592 775 Gene3D Phosphorylase Kinase; domain 1 7 95 - -
Cmo06g00592 775 Coils Coil 343 363 - -
Cmo06g00592 775 MobiDBLite consensus disorder prediction 428 542 - -
Cmo06g00592 775 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524
Cmo06g00592 775 MobiDBLite consensus disorder prediction 431 475 - -
Cmo06g00592 775 ProSiteProfiles Protein kinase domain profile. 18 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo06g00592 775 MobiDBLite consensus disorder prediction 483 507 - -
Cmo06g00592 775 Gene3D Transferase(Phosphotransferase) domain 1 99 307 - -
Cmo06g00592 775 SMART serkin_6 18 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo06g00592 775 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 3 722 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo06g00592 Cmo16g01271 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g02836 Cmo-Chr4:20276632 Cmo06g00592 Cmo-Chr6:2913131 2.06E-180 dispersed
Cmo06g00592 Cmo-Chr6:2913131 Cmo15g00350 Cmo-Chr15:1636510 2.27E-175 dispersed
Cmo16g01274 Cmo-Chr16:9085081 Cmo06g00592 Cmo-Chr6:2913131 4.34E-88 transposed
Cmo16g01271 Cmo-Chr16:9072710 Cmo06g00592 Cmo-Chr6:2913131 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74410 PF00069 Pkinase 7.80E-61 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo06g00592 - - csv:101213683 1319.68