Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo06g00612 ATGTTTACATGCATAGCATGTACGAAACAGACAGACGACGAGGGTGAGGATGGGGCTGCGCGTGGGAGTGGCACGCCTAGTACAAAGGAAGCCGTCAAAAGCCTGACAACGCAGATTAAGGACATGGCGTTGAAATTCTCTGGTGCTTATAGGCAGTGCAAACCCTGCACAGGCTCCAGTAGCTATAAGAAAGGACAGAGACCTTACCCAGATTTTGACACTGCTTCAGAAGGGGTTCCATACCCCTACATAGGAGGGGCAAGTGCAAGTTCAACACCTGCCTGGGACTTCCCTCCTGTCAATCGCCACCCACATACGAGATCTGACTCGAGATTTAAAGGGGTGTTCAGAGGAGACCAGACCCCTGGAGCCGATTCCACCATATCAGCATGTGATGTGGTGCTTGAGGATGAGGATGAGCCGAAAGAGTGGATGGCACAGGTGGAGCCTGGTGTTCACATTACTTTTGTGTCCCTACCCAATGGAGGCAATGATTTAAAACGAATTCGTTTCGATCGAGAAATGTTTAACAAATGGCAAGCTCAGCGATGGTGGGGCGAAAACTATGACAGAATAACGGAGCTCTATAATGTCCAGAGATTCAACCAACAAGCTCTTCATACGCCACCAAGAACTGAGGATGAGAGGGATTCTTCTTACTCAAAGATGGAAAGGGATAGCCCAATGACTGCAGCGAACAAAGATTGGGCACTGAAAAACCACAAACCTTCAGGAAGTAAAGGTTATTTTCCATCTGACCAGCATTTTGATCATGGAAGCAGCCACCACTATGCAGGGTCAAGTGCCTATCCAACCGGGGGCGCCAAAGGCGACATGTCATCTATGGAAGTCTCACGCACAACTACCTCTTCTAGAGACGAACCTTCAATTTCCGTTAGCAATGCAAGTGACATCGAGGCCGAATGGGTCGAGGAAGACGAACCAGGAGTCTACATAACAATCAGACAGCTTGTTGATGGCTCTAGAGAGCTTCGTCGTGTCAGATTCAGCCGTGAAAGGTTCGGGGAGGTGAACGCAAAGCAATGGTGGGAACAGAACAGGGAGAGAATCCAAGCTCAATACCTATAA 1089 48.85 MFTCIACTKQTDDEGEDGAARGSGTPSTKEAVKSLTTQIKDMALKFSGAYRQCKPCTGSSSYKKGQRPYPDFDTASEGVPYPYIGGASASSTPAWDFPPVNRHPHTRSDSRFKGVFRGDQTPGADSTISACDVVLEDEDEPKEWMAQVEPGVHITFVSLPNGGNDLKRIRFDREMFNKWQAQRWWGENYDRITELYNVQRFNQQALHTPPRTEDERDSSYSKMERDSPMTAANKDWALKNHKPSGSKGYFPSDQHFDHGSSHHYAGSSAYPTGGAKGDMSSMEVSRTTTSSRDEPSISVSNASDIEAEWVEEDEPGVYITIRQLVDGSRELRRVRFSRERFGEVNAKQWWEQNRERIQAQYL 362
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3019440 3025456 - CmoCh06G006120.1 Cmo06g00612 384174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo06g00612 362 MobiDBLite consensus disorder prediction 96 124 - -
Cmo06g00612 362 ProSiteProfiles BRX domain profile. 307 362 IPR013591 -
Cmo06g00612 362 Pfam Transcription factor BRX N-terminal domain 23 56 IPR027988 -
Cmo06g00612 362 MobiDBLite consensus disorder prediction 203 300 - -
Cmo06g00612 362 MobiDBLite consensus disorder prediction 281 300 - -
Cmo06g00612 362 Pfam Transcription factor regulating root and shoot growth via Pin3 306 361 IPR013591 -
Cmo06g00612 362 Pfam Transcription factor regulating root and shoot growth via Pin3 142 196 IPR013591 -
Cmo06g00612 362 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 362 IPR044532 -
Cmo06g00612 362 MobiDBLite consensus disorder prediction 209 223 - -
Cmo06g00612 362 MobiDBLite consensus disorder prediction 12 31 - -
Cmo06g00612 362 ProSiteProfiles BRX domain profile. 142 197 IPR013591 -
Cmo06g00612 362 PANTHER BREVIS RADIX-LIKE PROTEIN-RELATED 1 362 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo06g00612 Cmo16g01257 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo06g00612 Cmo-Chr6:3019440 Cmo12g01347 Cmo-Chr12:11645944 1.02E-98 dispersed
Cmo16g01257 Cmo-Chr16:8964554 Cmo06g00612 Cmo-Chr6:3019440 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo06g00612 - - mcha:111014865 699.508