Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo06g00690 ATGACACTCCAGGCAGCCTTCGAGCTCGGCTTGTTTGAGATCTTGGCCAAGGCCGGCGATGGGGCCGAGCTGTCTCCGATCGAGATAGCCGCTAAGATAACCACGTCGAACCCGGATGCAGCGTCGATGATCGATCGGATCCTGAGGCTTCTGGCGGCCCACTCCGTGGTTGGGTGCTCGGTGATCATCGATGAAAATGGGAATCAGCAAAGATTGTATAGCCTTAAGCCAGTGGCTAAGTATTTCGTTCTTAACGAAGATGGCGTGTCGTTGGGTGCTTTTTTATCGAGTGAGCTCAAGAATGCTGTCATCGAAGGAGGAGTTCCATTCAATAGGGCTCATGGGGGACTTCATGCCTTCGAATACCCTTGCTTGGATCAAAGATTTAATCAAGTTTTCAACAACGCAATGATAAATAACACTGCCACGGCCATCAAGACAGCTGTCAAATATTACAACGGTTTTGCAAACCTCAAGCAACTAGTTGATGTTGGTGGTGGTCTCGGAGTGACCCTTAAAATCATCGCATCTGCATATCCTTCAATCAAAGGCATCAACTTTGACTTGCCTCATGTCATTCAAGATGCACCGTCCTATCCAGGAGGAGACATGTTTGAGAAAGTTCCGAATGGAGATGCTATTTTTATGAAGTGTGTAATTCATGATTGGAGTGACGAGCAATGCGTGAAGCTATTGAAAAATTGCTACGCTGCGATCCCAGACGATGGGAAGGTAATCGTGATGGAAGGAGTGGTTCCGACGGTGCCGGAGACCACGGACGCAGCCAAAGCCGTCATCCAATGCGATATTCTTATGATGACTCAAAGCATAGGAGGAAGGGAGCGAACTCGCGATGAATTTAAAGCCCTTGCAACCAAAGCTGGCTTTAAATTCATCAAATTCGTCTGTTTCGTGTGGGATACAAAGATGGCCAACGACCTGAGACTATGTATCAAGAGACAGTATGCAATTTAA 975 47.28 MTLQAAFELGLFEILAKAGDGAELSPIEIAAKITTSNPDAASMIDRILRLLAAHSVVGCSVIIDENGNQQRLYSLKPVAKYFVLNEDGVSLGAFLSSELKNAVIEGGVPFNRAHGGLHAFEYPCLDQRFNQVFNNAMINNTATAIKTAVKYYNGFANLKQLVDVGGGLGVTLKIIASAYPSIKGINFDLPHVIQDAPSYPGGDMFEKVPNGDAIFMKCVIHDWSDEQCVKLLKNCYAAIPDDGKVIVMEGVVPTVPETTDAAKAVIQCDILMMTQSIGGRERTRDEFKALATKAGFKFIKFVCFVWDTKMANDLRLCIKRQYAI 324
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3506678 3509628 + CmoCh06G006900.1 Cmo06g00690 384252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo06g00690 324 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 97 304 IPR029063 -
Cmo06g00690 324 Pfam O-methyltransferase domain 98 297 IPR001077 GO:0008171
Cmo06g00690 324 Gene3D Vaccinia Virus protein VP39 130 304 IPR029063 -
Cmo06g00690 324 PANTHER CAFFEIC ACID 3-O-METHYLTRANSFERASE 1-LIKE 1 305 - -
Cmo06g00690 324 SUPERFAMILY Winged helix DNA-binding domain 1 84 IPR036390 -
Cmo06g00690 324 PIRSF O-mtase 1 309 IPR016461 GO:0008168
Cmo06g00690 324 Gene3D - 1 148 IPR036388 -
Cmo06g00690 324 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 315 IPR016461 GO:0008168
Cmo06g00690 324 Pfam Dimerisation domain 1 52 IPR012967 GO:0046983
Cmo06g00690 324 PANTHER O-METHYLTRANSFERASE 1 305 IPR016461 GO:0008168
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo06g00690 Cmo-Chr6:3506678 Cmo06g00696 Cmo-Chr6:3533343 0 dispersed
Cmo06g00690 Cmo-Chr6:3506678 Cmo06g00691 Cmo-Chr6:3510263 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo06g00690 K13066 - csv:101214916 436.417