Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo06g00691 | ATGGCTTCCACGGCGGGGGAACAGTCAACCATGGCTTCCTCCAACTCCGACGACGGCCAAGAACAACAACACTACGCTTACGCTGCGCAATTGGTTACCTCAACAGTTCTGCCGATGACACTTCAAGCAGCCTTCGAGCTCGGCTTGTTTGAGATCTTGGCCAAGGCTGGCGATGGGGCCGAGCTGTCTCCGACTGAGATAGCCGCTAAGATAACCACCTCGAACCCGGATGCTGCGTCGATGATCGATCGGATCCTGAGGCTTCTAGCGGCCCACACGGTGGTGGGGTGCTCGGTGATCATTGATGAAAATGGGAATCAGCAGAGATTGTATAGCATTACGCCGGTCGCTAAGTATTTTGTTCTTAACGAAGATGGTGTGTCGTTGGGTCCTATTTTATCGATGATTCAAGATAAAGTCATTCTCCATAGCTGGAGTGAGCTGAAGAATGTTGTGATTGAAGGAGGAGTTCCATTCAATAGGGCTCATGAGGGACTTCATTTCTTTGAATACAATTGTTTGGATCAAAGATTTAATCAAGTTTTCAACAACGCGATGATAAATCACACCACCACGGTCATCAAGATAGTTGTCGAGTCCTACAACGGCTTTGCAAGCCTCAAGCAACTAGTTGATGTTGGTGGTGGTCTCGGGATCACCCTAAAAATCATCACGTCTGCATACCCTTCAATCAAAGGCATCAACTTTGACTTGGCTCATGTCATTCAAGATGCACCATCCTATCCACGTGTAGAACATGTAGCAGGAGACATGTTCGAGAAAATTCCAAACGGAGATGCTATTTTCATGAAGTGGATACTTCACGATTGGAGTGACGACCATTGCGTGAAGCTGTTGAAAAATTGCTATGTCGCCATCCCGGACGACGGGAAGGTCATTGTGATGGAGGGAGTGGCTCCAACGGTGCCAGAGACCACAACCGCAGCGAAAGTCATCATCCAAGGCGATGTGCTTATGATGACTCAAAGCATAGAAGGAAAGGAGCGAACTCGCGATGAATTTAAAGCCCTCGCAGCCAAAGCTGGCTTTAAACACATCAAATTCGTTTGTTTCGTAATTGGCGGTCTACTAAATGCTACTTTTGGAAATGCAACAGAACTCATCATATCAATTTTTGCACTGAAAAATCAAATGATACGTGTTGTTCAGCTATCCTTGCTAGGCTCAATTCTGTCGAACATGTTGCTGGTGCTTGGTTGTGCATTCTTCTGTGGTGGGCTTGTTTTCAACAAAAAGGAACAGACTTTTAACAAGGCAGCTGCTGGTGTCAACTCAGGATTGTTGTTAATGGCTGTCATGGGCCTTCTTTTTCCTGTTCTTCTCAACTACACCCACAGCGAAGCCCATTTTGGGAAGTCGGAATTGGCACTTTCTAGATTCAGCAGTTGCATTATGCTTCTGGCTTATGCTGCTTATCTTTTCTTTCAGTTAAAAACCTTCGAGCTCGGCTTGTTTGAGATCTTGGCCAAGGCCGGCGATGGGGCCGAGCTGTCTCCGATCGAGATAGCCGCTAAGATAACCACGTCGAACCCGGATGCAGCGTCGATGATCGATCGGATCCTGAGGCTTCTGGCGGCCCACTCCGTGGTTGGGTGCTCGGTGATCATCGATGAAAATGGGAATCAGCAAAGATTGTATAGCCTTAAGCCAGTGGCTAAGTATTTCGTTCTTAACGAAGATGGCGTGTCGTTGGGTGCTTTTTTATCGTTGATCCAAGACAAAGTCTCGCTCCAAAGCTGGAGTGAGCTCAAGAATGCTGTCATCGAAGGAGGAGTTCCATTCAATAGGGCTCATGGGGGACTTCATGCCTTCGAATACCCTTGCTTGGATCAAAGATTTAATCAAGTTTTCAACAACGCAATGATAAATAACACTGCCACGGCCATCAAGACAGCTGTCAAATATTACAACGGTTTTGCAAACCTCAAGCAACTAGTTGATGTTGGTGGTGGTCTCGGAGTGACCCTTAAAATCATCGCATCTGCATATCCTTCAATCAAAGGCATCAACTTTGACTTGCCTCATGTCATTCAAGATGCACCGTCCTATCCAGGAGGAGACATGTTTGAGAAAGTTCCGAATGGAGATGCTATTTTTATGAAGTGTGTAATTCATGATTGGAGTGACGAGCAATGCGTGAAGCTATTGAAAAATTGCTACGCTGCGATCCCAGACGATGGGAAGGTAATCGTGATGGAAGGAGTGGTTCCGACGGTGCCGGAGACCACGGACGCAGCCAAAGCCGTCATCCAATGCGATATTCTTATGATGACTCAAAGCATAGGAGGAAGGGAGCGAACTCGCGATGAATTTAAAGCCCTTGCAACCAAAGCTGGCTTTAAATTCATCAAATTCGTCTGTTTCGTTAGGCTGTTACATGGTTGGGCCTAA | 2412 | 46.68 | MASTAGEQSTMASSNSDDGQEQQHYAYAAQLVTSTVLPMTLQAAFELGLFEILAKAGDGAELSPTEIAAKITTSNPDAASMIDRILRLLAAHTVVGCSVIIDENGNQQRLYSITPVAKYFVLNEDGVSLGPILSMIQDKVILHSWSELKNVVIEGGVPFNRAHEGLHFFEYNCLDQRFNQVFNNAMINHTTTVIKIVVESYNGFASLKQLVDVGGGLGITLKIITSAYPSIKGINFDLAHVIQDAPSYPRVEHVAGDMFEKIPNGDAIFMKWILHDWSDDHCVKLLKNCYVAIPDDGKVIVMEGVAPTVPETTTAAKVIIQGDVLMMTQSIEGKERTRDEFKALAAKAGFKHIKFVCFVIGGLLNATFGNATELIISIFALKNQMIRVVQLSLLGSILSNMLLVLGCAFFCGGLVFNKKEQTFNKAAAGVNSGLLLMAVMGLLFPVLLNYTHSEAHFGKSELALSRFSSCIMLLAYAAYLFFQLKTFELGLFEILAKAGDGAELSPIEIAAKITTSNPDAASMIDRILRLLAAHSVVGCSVIIDENGNQQRLYSLKPVAKYFVLNEDGVSLGAFLSLIQDKVSLQSWSELKNAVIEGGVPFNRAHGGLHAFEYPCLDQRFNQVFNNAMINNTATAIKTAVKYYNGFANLKQLVDVGGGLGVTLKIIASAYPSIKGINFDLPHVIQDAPSYPGGDMFEKVPNGDAIFMKCVIHDWSDEQCVKLLKNCYAAIPDDGKVIVMEGVVPTVPETTDAAKAVIQCDILMMTQSIGGRERTRDEFKALATKAGFKFIKFVCFVRLLHGWA | 803 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 3510263 | 3522175 | + | CmoCh06G006910.1 | Cmo06g00691 | 384253 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo06g00691 | 803 | SUPERFAMILY | Winged helix DNA-binding domain | 20 | 122 | IPR036390 | - | |
Cmo06g00691 | 803 | ProSiteProfiles | SAM-dependent O-methyltransferase class II-type profile. | 471 | 803 | IPR016461 | GO:0008168 | |
Cmo06g00691 | 803 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 125 | 357 | IPR029063 | - | |
Cmo06g00691 | 803 | SUPERFAMILY | Winged helix DNA-binding domain | 470 | 564 | IPR036390 | - | |
Cmo06g00691 | 803 | Pfam | Sodium/calcium exchanger protein | 358 | 484 | IPR004837 | GO:0016021|GO:0055085 | |
Cmo06g00691 | 803 | Gene3D | - | 5 | 120 | IPR036388 | - | |
Cmo06g00691 | 803 | PANTHER | CAFFEIC ACID 3-O-METHYLTRANSFERASE 1-LIKE | 486 | 794 | - | - | |
Cmo06g00691 | 803 | Gene3D | Vaccinia Virus protein VP39 | 621 | 795 | IPR029063 | - | |
Cmo06g00691 | 803 | PANTHER | O-METHYLTRANSFERASE | 20 | 359 | IPR016461 | GO:0008168 | |
Cmo06g00691 | 803 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 568 | 795 | IPR029063 | - | |
Cmo06g00691 | 803 | PANTHER | CAFFEIC ACID 3-O-METHYLTRANSFERASE 1-LIKE | 20 | 359 | - | - | |
Cmo06g00691 | 803 | Gene3D | - | 487 | 639 | IPR036388 | - | |
Cmo06g00691 | 803 | ProSiteProfiles | SAM-dependent O-methyltransferase class II-type profile. | 29 | 369 | IPR016461 | GO:0008168 | |
Cmo06g00691 | 803 | PANTHER | O-METHYLTRANSFERASE | 486 | 794 | IPR016461 | GO:0008168 | |
Cmo06g00691 | 803 | Pfam | O-methyltransferase domain | 145 | 351 | IPR001077 | GO:0008171 | |
Cmo06g00691 | 803 | Pfam | O-methyltransferase domain | 587 | 788 | IPR001077 | GO:0008171 | |
Cmo06g00691 | 803 | Gene3D | Vaccinia Virus protein VP39 | 122 | 361 | IPR029063 | - | |
Cmo06g00691 | 803 | Pfam | Dimerisation domain | 39 | 90 | IPR012967 | GO:0046983 | |
Cmo06g00691 | 803 | Pfam | Dimerisation domain | 487 | 532 | IPR012967 | GO:0046983 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo06g00691 | Cmo-Chr6:3510263 | Cmo06g00697 | Cmo-Chr6:3536849 | 0 | dispersed | |
Cmo20g00692 | Cmo-Chr20:3416859 | Cmo06g00691 | Cmo-Chr6:3510263 | 1.73E-55 | dispersed | |
Cmo06g00691 | Cmo-Chr6:3510263 | Cmo06g00695 | Cmo-Chr6:3530060 | 1.93E-77 | proximal | |
Cmo06g00690 | Cmo-Chr6:3506678 | Cmo06g00691 | Cmo-Chr6:3510263 | 0 | tandem | |
Cmo06g00691 | Cmo-Chr6:3510263 | Cmo06g00692 | Cmo-Chr6:3523290 | 4.16E-40 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo06g00691 | K13066 | - | dcr:108215819 | 616.305 |