Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo06g00693 ATGAATTTAAAGCCCTCGCAGCCAAAGCTGGCTTTAAACACATCAAATTCGTTTGTTTCAACTCGCGATGAATTTAAAGCCCTCGCAGCCAAAGCTGGCTTTAAACACATCAAATTCGTTTGTTTCGAACAGTCAGCCATGGCTTCCTCCAACTCCGACGACAGCCAAGAACAACAACACTACTCTTACGCTGCGCAATTGGTTACCTTATCAGTTCTGCCGATGACACTCCAAGCAGCCTTCGAGCTTGGCTTGTTTGAGATCTTGGCCAAGGCTGGCGATGGGGCCGAGCTGTCTCCGACTGAGATAGCTGCTAAGATAACCACCTCGAACCCGGATGCTGCGTCGATGATCGATCGGATCCTGAGGCTTATGGCGGCCCACTCGGTGGTGGGGTGCTCTGTGATCATTGATGAAAATGGGAATCAGCAGAGATTGTATAGCCTTATGCCGGTGACTAAGTATTTTATTCCGAATGAAGATGGCGTGTCGTTGGGTCCTATTGTATCGATGATCCAAGATAAAGTCTTTCTTCATAGCTGGAGTGAGCTAAAGAATGCCGTGATTGAAGGAGGAGTTCCATTCAATAGGGCTCATGGGGGAGTTCACGCCTTTGAATACCCTCGCTTGGATCAAAGATTTAATCAAATTTTCAACAACGCAATGATAAACTACTCCACTACGGCCATCAAGGCCGTTGTCAAGTGCTACAACGGTTTTGCAAACCTCAAGCAACTAGTTGATGTTGGTGGTGGCCTCGGGGTCACCCTTAAAATCATCACGTCTGCATACCCTTCAATAAAAGGCATCAACTTTGACTTGCCTCATGTTATTCAAGATGCACCTTCCTATCCAGGTGTGGAACATGTAGGAGGAGACATGTTTGAGAAAGTTCCCGAGGGAGATGCTATTTTCATAAAGGTTAGTTTTCTATATATATTTATTTCATAA 951 45.64 MNLKPSQPKLALNTSNSFVSTRDEFKALAAKAGFKHIKFVCFEQSAMASSNSDDSQEQQHYSYAAQLVTLSVLPMTLQAAFELGLFEILAKAGDGAELSPTEIAAKITTSNPDAASMIDRILRLMAAHSVVGCSVIIDENGNQQRLYSLMPVTKYFIPNEDGVSLGPIVSMIQDKVFLHSWSELKNAVIEGGVPFNRAHGGVHAFEYPRLDQRFNQIFNNAMINYSTTAIKAVVKCYNGFANLKQLVDVGGGLGVTLKIITSAYPSIKGINFDLPHVIQDAPSYPGVEHVGGDMFEKVPEGDAIFIKVSFLYIFIS 316
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3523951 3527177 + CmoCh06G006930.1 Cmo06g00693 384255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo06g00693 316 Pfam Dimerisation domain 75 126 IPR012967 GO:0046983
Cmo06g00693 316 Pfam O-methyltransferase domain 181 307 IPR001077 GO:0008171
Cmo06g00693 316 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 161 312 IPR029063 -
Cmo06g00693 316 SUPERFAMILY Winged helix DNA-binding domain 55 159 IPR036390 -
Cmo06g00693 316 PANTHER O-METHYLTRANSFERASE 52 308 IPR016461 GO:0008168
Cmo06g00693 316 PANTHER CAFFEIC ACID 3-O-METHYLTRANSFERASE 1-LIKE 52 308 - -
Cmo06g00693 316 Gene3D Vaccinia Virus protein VP39 158 312 IPR029063 -
Cmo06g00693 316 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 65 316 IPR016461 GO:0008168
Cmo06g00693 316 Gene3D - 42 156 IPR036388 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo06g00693 Cmo-Chr6:3523951 Cmo06g00698 Cmo-Chr6:3540073 9.42E-06 dispersed
Cmo06g00692 Cmo-Chr6:3523290 Cmo06g00693 Cmo-Chr6:3523951 1.12E-49 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo06g00693 K13066 - csv:101205290 405.986