Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo06g00693 | ATGAATTTAAAGCCCTCGCAGCCAAAGCTGGCTTTAAACACATCAAATTCGTTTGTTTCAACTCGCGATGAATTTAAAGCCCTCGCAGCCAAAGCTGGCTTTAAACACATCAAATTCGTTTGTTTCGAACAGTCAGCCATGGCTTCCTCCAACTCCGACGACAGCCAAGAACAACAACACTACTCTTACGCTGCGCAATTGGTTACCTTATCAGTTCTGCCGATGACACTCCAAGCAGCCTTCGAGCTTGGCTTGTTTGAGATCTTGGCCAAGGCTGGCGATGGGGCCGAGCTGTCTCCGACTGAGATAGCTGCTAAGATAACCACCTCGAACCCGGATGCTGCGTCGATGATCGATCGGATCCTGAGGCTTATGGCGGCCCACTCGGTGGTGGGGTGCTCTGTGATCATTGATGAAAATGGGAATCAGCAGAGATTGTATAGCCTTATGCCGGTGACTAAGTATTTTATTCCGAATGAAGATGGCGTGTCGTTGGGTCCTATTGTATCGATGATCCAAGATAAAGTCTTTCTTCATAGCTGGAGTGAGCTAAAGAATGCCGTGATTGAAGGAGGAGTTCCATTCAATAGGGCTCATGGGGGAGTTCACGCCTTTGAATACCCTCGCTTGGATCAAAGATTTAATCAAATTTTCAACAACGCAATGATAAACTACTCCACTACGGCCATCAAGGCCGTTGTCAAGTGCTACAACGGTTTTGCAAACCTCAAGCAACTAGTTGATGTTGGTGGTGGCCTCGGGGTCACCCTTAAAATCATCACGTCTGCATACCCTTCAATAAAAGGCATCAACTTTGACTTGCCTCATGTTATTCAAGATGCACCTTCCTATCCAGGTGTGGAACATGTAGGAGGAGACATGTTTGAGAAAGTTCCCGAGGGAGATGCTATTTTCATAAAGGTTAGTTTTCTATATATATTTATTTCATAA | 951 | 45.64 | MNLKPSQPKLALNTSNSFVSTRDEFKALAAKAGFKHIKFVCFEQSAMASSNSDDSQEQQHYSYAAQLVTLSVLPMTLQAAFELGLFEILAKAGDGAELSPTEIAAKITTSNPDAASMIDRILRLMAAHSVVGCSVIIDENGNQQRLYSLMPVTKYFIPNEDGVSLGPIVSMIQDKVFLHSWSELKNAVIEGGVPFNRAHGGVHAFEYPRLDQRFNQIFNNAMINYSTTAIKAVVKCYNGFANLKQLVDVGGGLGVTLKIITSAYPSIKGINFDLPHVIQDAPSYPGVEHVGGDMFEKVPEGDAIFIKVSFLYIFIS | 316 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 3523951 | 3527177 | + | CmoCh06G006930.1 | Cmo06g00693 | 384255 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo06g00693 | 316 | Pfam | Dimerisation domain | 75 | 126 | IPR012967 | GO:0046983 | |
Cmo06g00693 | 316 | Pfam | O-methyltransferase domain | 181 | 307 | IPR001077 | GO:0008171 | |
Cmo06g00693 | 316 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 161 | 312 | IPR029063 | - | |
Cmo06g00693 | 316 | SUPERFAMILY | Winged helix DNA-binding domain | 55 | 159 | IPR036390 | - | |
Cmo06g00693 | 316 | PANTHER | O-METHYLTRANSFERASE | 52 | 308 | IPR016461 | GO:0008168 | |
Cmo06g00693 | 316 | PANTHER | CAFFEIC ACID 3-O-METHYLTRANSFERASE 1-LIKE | 52 | 308 | - | - | |
Cmo06g00693 | 316 | Gene3D | Vaccinia Virus protein VP39 | 158 | 312 | IPR029063 | - | |
Cmo06g00693 | 316 | ProSiteProfiles | SAM-dependent O-methyltransferase class II-type profile. | 65 | 316 | IPR016461 | GO:0008168 | |
Cmo06g00693 | 316 | Gene3D | - | 42 | 156 | IPR036388 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo06g00693 | Cmo-Chr6:3523951 | Cmo06g00698 | Cmo-Chr6:3540073 | 9.42E-06 | dispersed | |
Cmo06g00692 | Cmo-Chr6:3523290 | Cmo06g00693 | Cmo-Chr6:3523951 | 1.12E-49 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo06g00693 | K13066 | - | csv:101205290 | 405.986 |