Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo06g00695 ATGTCGGAGAGTTTTGCTTACAAGAGCGTGAAGATTGTAATCTTCTCAAATAAACTCAACTTCCTTATGTCTTTTGGGCCGCTAGCAATTCTTGTGGATAAGTTGACTGGACACAATAGTTGGGTCTTCTTCCTGAGTCTATTGGGTATCATACCGTTCGCTGAGCGGTTAGGTTATGCGACAGAGCAGCTGGCTTTTTACACTGGGCCTACAGTTGGCGGTCTACTAAATGCTACTTTTGGAAATGCAACAGAACTCATCATATCAATTTTTGCACTGAAAAATCAAATGATACGTGTTGTTCAGCTATCCTTGCTAGGCTCAATTCTGTCGAACATGTTGCTGGTGCTTGGTTGTGCATTCTTCTGTGGTGGGCTTGTTTTCAACAAAAAGGAACAGACTTTTAACAAGGCAGCTGCTGGTGTCAACTCAGGATTGTTGTTAATGGCTGTCATGGGCCTTCTTTTTCCTGTTCTTCTCAACTACACCCACAGCGAAGCCCATTTTGGGAAGTCGGAATTGGCACTTTCTAGATTCAGCAGTTGCATTATGCTTCTGGCTTATGCTGCTTATCTTTTCTTTCAGTTAAAAAGTCAGAGGAATAATTATTCTTCCGTTTATGAGGTTAATTATGTTATTTTGGTCTTTCTTTTGAAGTTATGCATCATCATGGAAGATAATTTGTGCTGTCTTCTGCATAATACTATACCAATGTAG 717 40.45 MSESFAYKSVKIVIFSNKLNFLMSFGPLAILVDKLTGHNSWVFFLSLLGIIPFAERLGYATEQLAFYTGPTVGGLLNATFGNATELIISIFALKNQMIRVVQLSLLGSILSNMLLVLGCAFFCGGLVFNKKEQTFNKAAAGVNSGLLLMAVMGLLFPVLLNYTHSEAHFGKSELALSRFSSCIMLLAYAAYLFFQLKSQRNNYSSVYEVNYVILVFLLKLCIIMEDNLCCLLHNTIPM 238
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3530060 3532875 + CmoCh06G006950.1 Cmo06g00695 384257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo06g00695 238 PANTHER VACUOLAR CATION/PROTON EXCHANGER 2 6 208 - -
Cmo06g00695 238 Gene3D - 70 223 IPR044880 -
Cmo06g00695 238 Pfam Sodium/calcium exchanger protein 41 196 IPR004837 GO:0016021|GO:0055085
Cmo06g00695 238 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 6 208 IPR004713 GO:0006812|GO:0008324|GO:0016021
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo06g00695 Cmo-Chr6:3530060 Cmo20g00692 Cmo-Chr20:3416859 1.38E-99 dispersed
Cmo16g01015 Cmo-Chr16:7001561 Cmo06g00695 Cmo-Chr6:3530060 2.16E-10 dispersed
Cmo06g00691 Cmo-Chr6:3510263 Cmo06g00695 Cmo-Chr6:3530060 1.93E-77 proximal
Cmo06g00695 Cmo-Chr6:3530060 Cmo06g00700 Cmo-Chr6:3550261 1.11E-147 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo06g00695 K07300 - jre:108985860 330.872