Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo06g00697 ATGGCTTCCACGGCGGGGGAACAGTCAACCATGGCTTCCTCCAACTCCGACGACGGCCAAGAACAACAACACTACGCTTACGCTGCGCAATTGGTTACCTCAACAGTTCTGCCGATGACACTTCAAGCAGCCTTCGAGCTCGGCTTGTTTGAGATCTTGGCCAAGGCTGGCGATGGGGCCGAGCTGTCTCCGACTGAGATAGCCGCTAAGATAACCACCTCGAACCCGGATGCTGCGTCGATGATCGATCGGATCCTGAGGCTTCTAGCGGCCCACACGGTGGTGGGGTGCTCGGTGATCATTGATGAAAATGGGAATCAGCAGAGATTGTATAGCATTACGCCGGTCGCTAAGTATTTTGTTCTTAACGAAGATGGTGTGTCGTTGGGTCCTATTTTATCGATGATTCAAGATAAAGTCATTCTCCATAGCTGGAGTGAGCTGAAGAATGTTGTGATTGAAGGAGGAGTTCCATTCAATAGGGCTCATGAGGGACTTCATTTCTTTGAATACAATTGTTTGGATCAAAGATTTAATCAAGTTTTCAACAACGCGATGATAAATCACACCACCACGGTCATCAAGATAGTTGTCGAGTCCTACAACGGCTTTGCAAGCCTCAAGCAACTAGTTGATGTTGGTGGTGGTCTCGGGATCACCCTAAAAATCATCACGTCTGCATACCCTTCAATCAAAGGCATCAACTTTGACTTGGCTCATGTCATTCAAGATGCACCATCCTATCCACGTGTAGAACATGTAGCAGGAGACATGTTCGAGAAAATTCCAAACGGAGATGCTATTTTCATGAAGTGGATACTTCACGATTGGAGTGACGACCATTGCGTGAAGCTGTTGAAAAATTGCTATGTCGCCATCCCGGACGACGGGAAGGTCATTGTGATGGAGGGAGTGGCTCCAACGGTGCCAGAGACCACAGCCGCAGCGAAAGTCATCATCCAAGGCGATGTGCTTATGATGACTCAAAGCATAGAAGGAAAGGAGCGAACTCGCGATGAATTTAAAGCCCTCGCAGCCAAAGCTGGCTTTAAACACATCAAATTCGTTTGTTTCGTAAGTAATTATTGGATCATAGAGTTCTCGAAATGA 1110 47.39 MASTAGEQSTMASSNSDDGQEQQHYAYAAQLVTSTVLPMTLQAAFELGLFEILAKAGDGAELSPTEIAAKITTSNPDAASMIDRILRLLAAHTVVGCSVIIDENGNQQRLYSITPVAKYFVLNEDGVSLGPILSMIQDKVILHSWSELKNVVIEGGVPFNRAHEGLHFFEYNCLDQRFNQVFNNAMINHTTTVIKIVVESYNGFASLKQLVDVGGGLGITLKIITSAYPSIKGINFDLAHVIQDAPSYPRVEHVAGDMFEKIPNGDAIFMKWILHDWSDDHCVKLLKNCYVAIPDDGKVIVMEGVAPTVPETTAAAKVIIQGDVLMMTQSIEGKERTRDEFKALAAKAGFKHIKFVCFVSNYWIIEFSK 369
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3536849 3538292 + CmoCh06G006970.1 Cmo06g00697 384259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo06g00697 369 Pfam O-methyltransferase domain 145 351 IPR001077 GO:0008171
Cmo06g00697 369 PANTHER O-METHYLTRANSFERASE 20 368 IPR016461 GO:0008168
Cmo06g00697 369 Gene3D - 4 120 IPR036388 -
Cmo06g00697 369 PANTHER CAFFEIC ACID 3-O-METHYLTRANSFERASE 1-LIKE 20 368 - -
Cmo06g00697 369 Gene3D Vaccinia Virus protein VP39 122 369 IPR029063 -
Cmo06g00697 369 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 29 369 IPR016461 GO:0008168
Cmo06g00697 369 SUPERFAMILY Winged helix DNA-binding domain 20 122 IPR036390 -
Cmo06g00697 369 PIRSF O-mtase 6 369 IPR016461 GO:0008168
Cmo06g00697 369 Pfam Dimerisation domain 39 90 IPR012967 GO:0046983
Cmo06g00697 369 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 125 367 IPR029063 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo06g00691 Cmo-Chr6:3510263 Cmo06g00697 Cmo-Chr6:3536849 0 dispersed
Cmo06g00692 Cmo-Chr6:3523290 Cmo06g00697 Cmo-Chr6:3536849 9.45E-57 dispersed
Cmo06g00697 Cmo-Chr6:3536849 Cmo06g00699 Cmo-Chr6:3544733 5.26E-148 dispersed
Cmo06g00696 Cmo-Chr6:3533343 Cmo06g00697 Cmo-Chr6:3536849 0 tandem
Cmo06g00697 Cmo-Chr6:3536849 Cmo06g00698 Cmo-Chr6:3540073 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo06g00697 K13066 - csv:101214916 530.791