Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo06g00700 ATGTCGGAGAGTTTTGCTTACAAGAGCGTGAAGATTGTAATCTTCTCAAATAAACTCAACTTCCTTATGTCTTTTGGGCCGCTAGCAATTCTTGTGGATAAGTTGACTGGACACAATAGTTGGGTCTTCTTCCTGAGTCTATTGGGTATCATACCGTTCGCTGAGCGGTTAGGTTATGCAACAGAGCAGCTGGCTTTTTACACTGGGCCTACAGTTGGCGGTCTACTAAATGCTACTTTTGGAAATGCAACAGAACTCATCATATCAATTTTTGCACTGAAAAATCAAATGATACGTGTTGTTCAGCTATCCTTGCTAGGCTCAATTCTGTCGAACATGTTGCTGGTGCTTGGTTGTGCATTCTTCTGTGGTGGGCTTGTTTTCAACAAAAAGGAACAGACTTTTAACAAGGCAGCTGCTGGTGTCAACTCAGGATTGTTGTTAATGGCTGTCATGGGCCTTCTTTTTCCTGTTCTTCTCAACTACACCCACAGCGAAGCCCATTTTGGGAAGTCGGAATTGGCACTTTCTAGATTCAGCAGTTGCATTATGCTTCTGGCTTATGCTGCTTATCTTTTCTTTCAGTTAAAAAGTCAGAGGAATAATTATTCTTCCGTTTATGAGGAAGAAACTCGGAGTGAAGAAATCTCAGATGAAGATGAAGCTCCTGAGATCACCAAGTGGGAATCAGTTATCTGGCTATCAATTTTGACTGCCTGTATCTCCGTTCTATCAGAATACTTGGTTGATGCAATCGAAGTTGCATCTGAATCATTGAAAATCCCAGTGTCGTTTATTAGTGTTATACTGCTTCCGATTGTGGGGAATGCTGCTGAGCATGCAAGCGCTGTTATGTTTGCTATGAAAGATAAGCTTGATATTTCTCTGGGTGTAGCCATCGGATCATCAACCCAGATATCTATGTTCGGGGTTCCCTTCTGTGTGGTAATTGGGTGGATTATGGGACAACCAATGGACTTGAACTTTAAACTCTTCGAGACAGCTACACTTTTTATAACTGTAATAGTAGTAGCTTTCTTGCTGCAGGAAGGAACTTCAAATTACTTCAAGGGACTTATGCTTATCCTTTGTTATCTGATAGTGGCAGCTAGTTTTTTCGTGCACGTTGATCCTCCTTTACCCGAGGGCAAACTGGAGAGTTTGAAAGCGTAG 1173 41.86 MSESFAYKSVKIVIFSNKLNFLMSFGPLAILVDKLTGHNSWVFFLSLLGIIPFAERLGYATEQLAFYTGPTVGGLLNATFGNATELIISIFALKNQMIRVVQLSLLGSILSNMLLVLGCAFFCGGLVFNKKEQTFNKAAAGVNSGLLLMAVMGLLFPVLLNYTHSEAHFGKSELALSRFSSCIMLLAYAAYLFFQLKSQRNNYSSVYEEETRSEEISDEDEAPEITKWESVIWLSILTACISVLSEYLVDAIEVASESLKIPVSFISVILLPIVGNAAEHASAVMFAMKDKLDISLGVAIGSSTQISMFGVPFCVVIGWIMGQPMDLNFKLFETATLFITVIVVAFLLQEGTSNYFKGLMLILCYLIVAASFFVHVDPPLPEGKLESLKA 390
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3550261 3553477 + CmoCh06G007000.1 Cmo06g00700 384262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo06g00700 390 Pfam Sodium/calcium exchanger protein 231 370 IPR004837 GO:0016021|GO:0055085
Cmo06g00700 390 Pfam Sodium/calcium exchanger protein 41 196 IPR004837 GO:0016021|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g00312 Cmo-Chr2:1577782 Cmo06g00700 Cmo-Chr6:3550261 0 dispersed
Cmo06g00700 Cmo-Chr6:3550261 Cmo20g00692 Cmo-Chr20:3416859 0 dispersed
Cmo06g00695 Cmo-Chr6:3530060 Cmo06g00700 Cmo-Chr6:3550261 1.11E-147 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo06g00700 K07300 - csv:101205761 625.165