Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo06g00705 AAGAACATAGCCGAAGAAGCAATTTCCCACTCGTACAATAGACACATCAATGGCTTTGCAGCCATGCTTGATGAAAACCAAGCATCGGAACTTGCAAAATTTCCAAATGTAGTTTCAGTTTTTGAATGTCAAGCAAGAACATTGCACACGACAAGATCATGGAACTTTCTCGGAATGGAAAAACATGAAGGAATTCCTTTGAACTCCATTTGGAACGCCGCGCGATTTGGTGATGATACAATCATAGCTAACTTTGACTCAGAAGCGAAGAGCTTTAGTGACGAAGGGTATGGTCCTATCCCCTCGAGGTGGAAGGGAACTTGTCAAAGTGATTTAGACCCCAACTTCCATTGCAACAAGAAGTTGATTGGAGCAAGATTCTTCAACAAAGGCTATGGTATCCTCAATGCTACCTTCAATTCTCCCAGAGACCAAGAAGGCCATGGAACACACACTTTATCCATAGCTGGAGGCAATTTTGTATCTGGAGCTAATGTCTTTGCCATGGCCAATGGCACTGCCAAAGGCGGTTCACCTCGAGCCCGCATCGCTTCCTACAAGGTATGTTGGCCAGTAGAAGGTCGTCAGTGTTTGGATCCAAATGCCTTAGCTGCCTATGACGCTGCAATCAGTGATGGTGTCGACGTTATCTCGGTTTCCATCGGTGGAGAACCAAAAGAGTTTCTTAGAGATGCACTCTCTGTAGGAGCCTTCCATGCAGTTCAACATGGCATTGTTGTTGTTTGCTCCGCTGGGAACTTCGGACCGACTCCGGCGACCGTATCAAATGTATCGCCATGGGTTCTAACCGTTGGAGCTAGTACGATCGATCGTGATTTCACAAACTTCGTCGTCCTCGGAAACAAGAAGAAACTCAAGGGAACAAGCTTTTCTTCTAAAGCATTGGCATTCAACAAGTTCTATCCTTTAATCAATGCTGTGGATGCCAAAGCCAACAATGCCTCTAGCAGTGATGCGGAGGTTTGTAATGAGAGATCGCTTGATCCCACAAAGCTGGCAGGGAAAATTGTGGTTTGCCTTCGAGGGGTCATTTCAAGAGTGTCAAAGGGCTATGTAGTGGCCCAAGCAGGGGCTGCTGGCATGATTTTGGTTAACGATAAGGACAATGGGGATGCCATTGCCACTGATCTGCACCTCCTCCCAGCTTCCCATGTAACCTTCAACGACGGCATATCCATCTTCCAATACATCAAATCTACGAAGACACCAATGGCTTGCATCAGTTCTGTGAAGACAGAATTAGATGTCAATCCATCGCCAGTAATGGCAGATTTCTCATCAAGAGGCCCCAGTACAATCGAGGGATCAATCCTTAAGCCTGATATAACAGCACCAGGTGTGAATATAATAGCGGCTTACCCTGATGAAATACCACTGATAGAGTTACAGGTTGATGATCGTCGAGCTCCTTTTAAGGTAGATTCTGGCACATCCATGGCTTGCCCCCATGTTGCTGGCATTGTAGGGCTTCTCAAATCTCGATATCCTAAATGGAGTCCAGCCGCCATTAAATCTGCAATCATGACCACAGCCAAAACAAACGCCAACAACTTCAATCCAATCTTAGACTTTACCGGACTCGAAGCGACTCCGTTGGCATACGGCAACGGACATGTTGACCCAAACAGTGTGATGGATCCTGGCCTCGTTTACGACATTTCAATAGATGATTACCTCAATTTCTTGTGTGCTCGAGGCGAGAATGCAACACAAATCAACAAATTATCCCACAAGTTATTTGTTTGCGATCCATCATTCAAAGTGACGGATTTGAATTACCCTTCGATCTCAGTCACAAATCTGAAAACGGGCCCTGTGACGATCAATCGAAAGTTGAAGAACGTAGGAAGTCCAGGGACGTATATTGCTCAAGTGAAGGCGCCTTTGGAAGTCTCTATCGCGGTTGAGCCAAGTACATTGCAATTTACAGCCATGGATGAAGAGAAGAGCTTCAAGATGGTGTTGCAGAGAAGTGGAAAGGGAAGTCAAGAGGGCTATGCGTTTGGGGAATTAGCATGGTCTGATGGCAAACACAATGTTAGGAGCTCCATAGCTGTTAATTTAGGGAAATAG 2094 45.65 KNIAEEAISHSYNRHINGFAAMLDENQASELAKFPNVVSVFECQARTLHTTRSWNFLGMEKHEGIPLNSIWNAARFGDDTIIANFDSEAKSFSDEGYGPIPSRWKGTCQSDLDPNFHCNKKLIGARFFNKGYGILNATFNSPRDQEGHGTHTLSIAGGNFVSGANVFAMANGTAKGGSPRARIASYKVCWPVEGRQCLDPNALAAYDAAISDGVDVISVSIGGEPKEFLRDALSVGAFHAVQHGIVVVCSAGNFGPTPATVSNVSPWVLTVGASTIDRDFTNFVVLGNKKKLKGTSFSSKALAFNKFYPLINAVDAKANNASSSDAEVCNERSLDPTKLAGKIVVCLRGVISRVSKGYVVAQAGAAGMILVNDKDNGDAIATDLHLLPASHVTFNDGISIFQYIKSTKTPMACISSVKTELDVNPSPVMADFSSRGPSTIEGSILKPDITAPGVNIIAAYPDEIPLIELQVDDRRAPFKVDSGTSMACPHVAGIVGLLKSRYPKWSPAAIKSAIMTTAKTNANNFNPILDFTGLEATPLAYGNGHVDPNSVMDPGLVYDISIDDYLNFLCARGENATQINKLSHKLFVCDPSFKVTDLNYPSISVTNLKTGPVTINRKLKNVGSPGTYIAQVKAPLEVSIAVEPSTLQFTAMDEEKSFKMVLQRSGKGSQEGYAFGELAWSDGKHNVRSSIAVNLGK 697
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3575305 3578419 + CmoCh06G007050.1 Cmo06g00705 384267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo06g00705 697 ProSitePatterns Serine proteases, subtilase family, serine active site. 483 493 IPR023828 -
Cmo06g00705 697 CDD PA_subtilisin_like 284 412 - -
Cmo06g00705 697 Pfam Peptidase inhibitor I9 5 48 IPR010259 -
Cmo06g00705 697 CDD Peptidases_S8_3 47 518 IPR034197 -
Cmo06g00705 697 ProSiteProfiles Serine proteases, subtilase domain profile. 1 552 - -
Cmo06g00705 697 SUPERFAMILY Subtilisin-like 48 556 IPR036852 GO:0004252|GO:0006508
Cmo06g00705 697 Pfam PA domain 319 397 IPR003137 -
Cmo06g00705 697 Pfam Subtilase family 138 522 IPR000209 GO:0006508|GO:0008236
Cmo06g00705 697 Gene3D Peptidase S8/S53 domain 86 565 IPR036852 GO:0004252|GO:0006508
Cmo06g00705 697 Gene3D - 277 421 - -
Cmo06g00705 697 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 3 696 IPR045051 -
Cmo06g00705 697 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 3 696 - -
Cmo06g00705 697 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 49 IPR037045 -
Cmo06g00705 697 Gene3D - 569 695 - -
Cmo06g00705 697 SUPERFAMILY PA domain 334 411 IPR046450 -
Cmo06g00705 697 PRINTS Subtilisin serine protease family (S8) signature 144 157 IPR015500 -
Cmo06g00705 697 PRINTS Subtilisin serine protease family (S8) signature 482 498 IPR015500 -
Cmo06g00705 697 Pfam Fibronectin type-III domain 597 693 IPR041469 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo06g00705 Cmo-Chr6:3575305 Cmo16g01018 Cmo-Chr16:7032614 0 dispersed
Cmo06g00705 Cmo-Chr6:3575305 Cmo06g00709 Cmo-Chr6:3607104 0 proximal
Cmo16g01017 Cmo-Chr16:7020890 Cmo06g00705 Cmo-Chr6:3575305 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo06g00705 - - cmo:103491006 1039.25