Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo06g00709 ATGCTGATTCAAAACATTGTTCTATTCAACAAGCACAAGTATTCCACTACAATCTATTGGGATCTTTGTTGGGAAGCAAAGGAATCAATTTTGTACTCCTATACCAGATCTTTCAACGGTTTTGCAGCCATACTCAACGAGAAAGAAGCAGCAGATTTAGCGAGAAGCCCACAAGTGATATCAGTGTTGGAAAACAGAGGGAGAAAATTGCATACAACAAACTCATGGCGTTTTCTTGGGGTGGAAGATGATGATGAAGGAATCCCTTCCAATTCCATTTGGAATGCTGCACAGTTTGGTCGAGATATGATCATAGCCAACATTGACACAGGTGTTTGGCCAGAATCAAAGAGTTTTAGCGACAAAGGGTATGGACCTGTCCCGTCAAAGTGGCAAGGCACGTGTCCAGATGACCCCGGCTTCCGTTGCAATAGGAAGCTGATTGGAGGAAGGTATTTCTACAAAGGATATAAATTCGCCGGAGGCGTTCTCAACGCCACTTTTGATTCCATACGCGACCACAATGGACATGGGACACACACACTCTCCACAGCCGCCGGCAACTTCGTCCCCGGAGCCAACATTTTCGGCCATGGTAAAGGCACGGCCAAAGGCGGCGCTCCAAAAGCCCGCGTCGCCGCCTACAAGGCCTGCTGGCCTCTCATACCCGAAGGAGAGTGCTTCGATGCCGATGTCCTCGCCGCCTTCGAAGCTGCCATCAACGACGGAGTCGACGTCATATCCGCTTCCCTCGGTGGAGGCGACCAAGAATTCTTCAGAGATCCTGTTGCTATCGCTGCGTTCCACGCCGCTCAACAAGGCATCATCGTCGTCTTCTCCGCTGGTAATGAAGGTCCTCAACCGGAAACCGTCGGCAACGTCGCGCCCTGGGAGATCACTGTCGCTGCGAGCACCACCGGGAGGAATTTCGTCAGTAACGTCGTCCTTGGAAATAACAAAATCCTAAAGGGCTCGAGCCTTTCGTCAGTTTCCGCATTACCACAGTTCTATCCATTAATCGATTCTGTGGATGCGAAATTCAGCAACGTCAACGAGTTCCAAGCGAAATTTTGCGGCAAGGGAACGCTTAATCCGAAGAAAGTACAGGGGAAGATCTTGATTTGCACTGCAGGGAAGATTACAGGAGTTGAGAAGGGTTACAATGCTGCGGAAGCAGGTGCTGTGGGGATGATTTTGGCTACCAATATTGACAATCTGGACGAAATCAAACCTGACTTGTATTTCCTTCCAGCTTCGGGTATAACCTATTCCGATGGCGAATTGCTTGACGATTACATCAACTCCACCAGACTAGTTCCCTTGTTTCTTGATTCATTCAACCTTCAAATGTTTCCAATCCAGTACACCAGTGGCTCAGATAATGAATGTAAGAACAGAGGTGGAACTAAATCCATCTCCAGTCGTTGCTGCATTCTCATCCAGAGGCCTTTCAAACATGAACTCCGTTTCCTCTGTCCTTTGCAGCCCGACATAACAGCTCCGGGTTTTACCATATTAGCGTCTTACCCCACCACAATAGCCCCAACCCGTTCAGGCTTCGACCAACGGCGCACCCCCTTCAATGTCTTCTCCGGTACCTCCATGGCCTGCCCTCACATCTCTGCCATCGCCGCCCTTCTCAAGTCCATTCATCCCGAATGGAGCCCTGCTGCAATTAAGTCTGCCCTTATGACCACGGCCAAAACAAGCGACAACGACAACGACAACTTGCTGCTCAATGCCACCCCATTTGCTCTTGGTGCAGGACATGTTCGTCCAAATGATGCAATGGATCCTGGCCTTGTATATGATATTACTGCCGATGAGTACTTGAATTTCTTGTGTGCTCGAGGCTACACTGAAATTCAACTTAGGAGATTCAGTAAGCAGCCATTTGTTTGTGAGAAATCATTCAAAGCCATAGATCTCAACTACCCATCCATCTCAATTCCAAATCTAAATGTGAATGCTCCGGTGACAATCAATAGAAGAGTTAAGAATGTGGGATATCCAGGGACATACGTGGCCCGAGTCGAGGTACCAGAGGGGGTTGCAGCATCGGTTGAGCCAAGTACGTTGCAGTTTAGCAGTGTGGGTGAAGAGAAAGCATTCAGGGTTGTAATGCAAAACACGGGAGAATTGAAACATGAAGGTTATGTGTTTGGGAAATTGATATGGTCCGATGGAAAGCATTCTGTAGGAAGTCCCATCTCAATGAATCTACGATCCGATTGA 2235 48.28 MLIQNIVLFNKHKYSTTIYWDLCWEAKESILYSYTRSFNGFAAILNEKEAADLARSPQVISVLENRGRKLHTTNSWRFLGVEDDDEGIPSNSIWNAAQFGRDMIIANIDTGVWPESKSFSDKGYGPVPSKWQGTCPDDPGFRCNRKLIGGRYFYKGYKFAGGVLNATFDSIRDHNGHGTHTLSTAAGNFVPGANIFGHGKGTAKGGAPKARVAAYKACWPLIPEGECFDADVLAAFEAAINDGVDVISASLGGGDQEFFRDPVAIAAFHAAQQGIIVVFSAGNEGPQPETVGNVAPWEITVAASTTGRNFVSNVVLGNNKILKGSSLSSVSALPQFYPLIDSVDAKFSNVNEFQAKFCGKGTLNPKKVQGKILICTAGKITGVEKGYNAAEAGAVGMILATNIDNLDEIKPDLYFLPASGITYSDGELLDDYINSTRLVPLFLDSFNLQMFPIQYTSGSDNECKNRGGTKSISSRCCILIQRPFKHELRFLCPLQPDITAPGFTILASYPTTIAPTRSGFDQRRTPFNVFSGTSMACPHISAIAALLKSIHPEWSPAAIKSALMTTAKTSDNDNDNLLLNATPFALGAGHVRPNDAMDPGLVYDITADEYLNFLCARGYTEIQLRRFSKQPFVCEKSFKAIDLNYPSISIPNLNVNAPVTINRRVKNVGYPGTYVARVEVPEGVAASVEPSTLQFSSVGEEKAFRVVMQNTGELKHEGYVFGKLIWSDGKHSVGSPISMNLRSD 744
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3607104 3612120 - CmoCh06G007090.1 Cmo06g00709 384271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo06g00709 744 Pfam Subtilase family 100 575 IPR000209 GO:0006508|GO:0008236
Cmo06g00709 744 Pfam Fibronectin type-III domain 642 738 IPR041469 -
Cmo06g00709 744 ProSitePatterns Serine proteases, subtilase family, serine active site. 532 542 IPR023828 -
Cmo06g00709 744 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 12 71 IPR037045 -
Cmo06g00709 744 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 19 741 - -
Cmo06g00709 744 ProSiteProfiles Serine proteases, subtilase domain profile. 75 597 - -
Cmo06g00709 744 SUPERFAMILY Subtilisin-like 70 601 IPR036852 GO:0004252|GO:0006508
Cmo06g00709 744 Gene3D - 614 741 - -
Cmo06g00709 744 Pfam Peptidase inhibitor I9 25 71 IPR010259 -
Cmo06g00709 744 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 19 741 IPR045051 -
Cmo06g00709 744 Pfam PA domain 354 429 IPR003137 -
Cmo06g00709 744 SUPERFAMILY PA domain 358 441 IPR046450 -
Cmo06g00709 744 CDD PA_subtilisin_like 313 437 - -
Cmo06g00709 744 PRINTS Subtilisin serine protease family (S8) signature 100 119 IPR015500 -
Cmo06g00709 744 PRINTS Subtilisin serine protease family (S8) signature 531 547 IPR015500 -
Cmo06g00709 744 PRINTS Subtilisin serine protease family (S8) signature 173 186 IPR015500 -
Cmo06g00709 744 Gene3D Peptidase S8/S53 domain 102 610 IPR036852 GO:0004252|GO:0006508
Cmo06g00709 744 Gene3D - 307 457 - -
Cmo06g00709 744 CDD Peptidases_S8_3 69 567 IPR034197 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo06g00709 Cmo-Chr6:3607104 Cmo16g01017 Cmo-Chr16:7020890 0 dispersed
Cmo06g00705 Cmo-Chr6:3575305 Cmo06g00709 Cmo-Chr6:3607104 0 proximal
Cmo06g00709 Cmo-Chr6:3607104 Cmo06g00713 Cmo-Chr6:3620868 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo06g00709 - - cmo:103491001 895.575