Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo06g00710 ATGGAGAAATGTTATTATATTTCTTATGTTATTTCTCCATTGCTTTTGTTTTTCTTTGTGCTCCAAACAGCGGCTGTTCCTACCCAGAAGTCCTACATTGTCTATTTGGGATCACACTCCTTTGGCCCAAATCCAAGCATATACGACGTCCAACTTGCAACCGAGTCTCAATATGATATATTAGGATCCGTCAAGGGAAGCAAAGTAGCAGCCAAAGACTCGATTCTCTACTCCTACAATCGATACATTAATGGCTTTGCTGCCGTTCTTGATGATCAAGAAGCCACGGCTCTTGCGAGGGTCGATAGTGATCGAGGAATCCCTCGGAACTCCATTTGGAAGGCGGCTCGGTTTGGGGAAGATACTATCATAGGGAACCTCGACACGGGTGTCTGGCCAGAGTCCCCAAGCTTCAACGATGCAGGGTATGGCCCTGTTCCTGCAAGGTGGAGGGGCGCTTGTGACGGTGGCTCCAAATTTCGATGCAACAGGAAGTTGATTGGAGCACGCTATTTCTACCGAGGATTCCAAGCCTCCGAACGTCCATGGACGAAGCAAAACATCAGCTTCGACAGTGCACAAGACCATGAAGGCCATGGATCGCACACTTTGTCCACTGCCGGTGGTAACTTTGTCCATGGAGTCAATGTGTTTGGCAATGGCAATGGGACTGCAAAAGGAGGTTCCCCAAGAGCTCGTGTTGTTGCCTACAAGGTCTGCTGGCCTTCAGAAAATGGCGGCTGTTACGATTCCGACATCTTAGCAGGCATCGAAGCCGCTATCAGCGACGGTGTGGATGTTCTCTCGGCCTCTCTTGGCATGGCAGCTCAAGAGTTTGCTCATGACGCTATTTCGATAGGGGCGTTCCATGCAGTTCAGCATGGAATCGTTGTGGTTTGCTCGGCTGGGAATGACGGCCCGTCTCCCGGGAGCGTGAGCAATGTGTCTCCTTGGATGGTCACTGTTGGAGCTAGTACCATCGACCGTGACTTTGTCAGTTACGTCGCCCTGGGGAACAAGAAGCAATTAAGGGGTTCAAGCCTTTCATCCAGTCGATTGCCGGCTGGTAAGTTCTACCCTTTGATAAAGGCTGTGCAAGTGAAAGCTGCCAATGCCACTGATGGGTTTGCCCAACTTTGCATGGATGGAACACTTGATCCCACAAAGGCAAAAGGGAAGATTATAGTTTGCCTTCGAGGAGAAAATGCAAGAGTGAGCAAGGGCTTCGAGGTTCATCGTGTCGGTGGCATCGGGATGGTTCTAGTAAATAACCAGATAGACGGTTCAGCTATTGTAGCTGATCCACACATACTTCCTGCTTCTCATCTAAGCGATGCGGATGGAGTTTCCATCACTCAATATTTGAGCTCCACCAAAACACCCGTGGCTTCCATAACCCATGCAAGCACAGAGATGGGAATTAAACCATCGCCTCTCATGGCTTCATTTTCATCAAGAGGCCCTGATTTCATCACAGAGGCTGTAATCAAGCCTGATATAACAGCACCGGGTGTAAATATAATCGCATCTGTCACCAACGATATAACAGCATCAGGCTTGCCATTTGATAAACGTCGAGTGCCTTTTAACATCGAGTCCGGCACTTCCATGTCATGCCCACACATCTCAGGTGTTGCAGGCCTTCTAAAGACTCTGCATCCCACATGGAGTCCTGGCGCTATCAAATCTGCCATCATGACTACAGCCAAAACTAGAGACAACACCAAGAACACAATATTGGACTACACCAAAGTTAAGGCTACTCCTTTTGATTATGGTGCAGGACATGTCCATCCAAACAATGCCATGGACCCCGGCCTCGTTTATGACACAACGGTTGATGACTATTTGAACTTCTTATGTACACGGGGCTACAACTCGCGCACACTCAAGAAATTCTCTAACAAGCCATTTGTTTGTGCCAAGAACTTTGCTACCACAGACTTCAACTATCCATCCATCTTGGTCCCCAGGTTGCAAATTGGTGAATCGGTGACGGTGAATAGAAGAGTGAAGAATGTGGGAAGCGCAGGCACATATGTGGCGCGGGTGAAGATGCCCAAGGGCATTACAGTTATGGTGGAGCCAAGTACGTTGCAATTTCACAGCGTTGGAGAAGAGAAGCCCTTCAAACTTGTATTTCATTATGCACATAAACTGCGACGTCAAGGCTATGTTTTTGGGGCATTGGTATGGTCAGATGGGAAACATTTTGTTAGAAGTTCTATTGCCGTGAATTTGGTTTGA 2247 48.06 MEKCYYISYVISPLLLFFFVLQTAAVPTQKSYIVYLGSHSFGPNPSIYDVQLATESQYDILGSVKGSKVAAKDSILYSYNRYINGFAAVLDDQEATALARVDSDRGIPRNSIWKAARFGEDTIIGNLDTGVWPESPSFNDAGYGPVPARWRGACDGGSKFRCNRKLIGARYFYRGFQASERPWTKQNISFDSAQDHEGHGSHTLSTAGGNFVHGVNVFGNGNGTAKGGSPRARVVAYKVCWPSENGGCYDSDILAGIEAAISDGVDVLSASLGMAAQEFAHDAISIGAFHAVQHGIVVVCSAGNDGPSPGSVSNVSPWMVTVGASTIDRDFVSYVALGNKKQLRGSSLSSSRLPAGKFYPLIKAVQVKAANATDGFAQLCMDGTLDPTKAKGKIIVCLRGENARVSKGFEVHRVGGIGMVLVNNQIDGSAIVADPHILPASHLSDADGVSITQYLSSTKTPVASITHASTEMGIKPSPLMASFSSRGPDFITEAVIKPDITAPGVNIIASVTNDITASGLPFDKRRVPFNIESGTSMSCPHISGVAGLLKTLHPTWSPGAIKSAIMTTAKTRDNTKNTILDYTKVKATPFDYGAGHVHPNNAMDPGLVYDTTVDDYLNFLCTRGYNSRTLKKFSNKPFVCAKNFATTDFNYPSILVPRLQIGESVTVNRRVKNVGSAGTYVARVKMPKGITVMVEPSTLQFHSVGEEKPFKLVFHYAHKLRRQGYVFGALVWSDGKHFVRSSIAVNLV 748
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3612674 3615642 + CmoCh06G007100.1 Cmo06g00710 384272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo06g00710 748 ProSitePatterns Serine proteases, subtilase family, serine active site. 534 544 IPR023828 -
Cmo06g00710 748 Pfam Fibronectin type-III domain 648 745 IPR041469 -
Cmo06g00710 748 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 109 IPR037045 -
Cmo06g00710 748 Gene3D Peptidase S8/S53 domain 121 616 IPR036852 GO:0004252|GO:0006508
Cmo06g00710 748 CDD PA_subtilisin_like 357 465 - -
Cmo06g00710 748 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 30 747 - -
Cmo06g00710 748 Gene3D - 620 748 - -
Cmo06g00710 748 Pfam PA domain 371 450 IPR003137 -
Cmo06g00710 748 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 30 747 IPR045051 -
Cmo06g00710 748 Pfam Subtilase family 119 581 IPR000209 GO:0006508|GO:0008236
Cmo06g00710 748 Pfam Peptidase inhibitor I9 31 102 IPR010259 -
Cmo06g00710 748 Gene3D - 328 472 - -
Cmo06g00710 748 CDD Peptidases_S8_3 110 569 IPR034197 -
Cmo06g00710 748 PRINTS Subtilisin serine protease family (S8) signature 533 549 IPR015500 -
Cmo06g00710 748 PRINTS Subtilisin serine protease family (S8) signature 195 208 IPR015500 -
Cmo06g00710 748 PRINTS Subtilisin serine protease family (S8) signature 119 138 IPR015500 -
Cmo06g00710 748 ProSiteProfiles Serine proteases, subtilase domain profile. 95 603 - -
Cmo06g00710 748 SUPERFAMILY Subtilisin-like 111 607 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo06g00710 Cmo-Chr6:3612674 Cmo06g00714 Cmo-Chr6:3638578 0 dispersed
Cmo06g00710 Cmo-Chr6:3612674 Cmo06g00713 Cmo-Chr6:3620868 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo06g00710 - - cmax:111498820 1353.58