Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo06g00713 | ATGGTCGTGAAGCCGTCGGATGGCGATTCAAAGAACGGGACGCAAGTCGACGATCCTAATGTAATCGATTTGGACATTGACAAGAAATTCCTTGGCCTTCCTATCAAGTCAGCCGTCGACAAGTTTCAACTTATTCCTGCATTTTTTAAGTACTTTGCTACAGGTATGAGAATGCTGAAGAGAGCTGGAAAAATTGGCGAGTTTGTCAATGTGTTTGTGAATGAGAAGCAGATTCCTGGTGAACCAGATGGCTATAACGGGACAAAGTCTCTATTCTTTGTCAAACAACGGAAGCTAGTCCATAAAAATAACTTTCTTCCGAGATGCATATATGTTGGTGTCATGATGAGACAAATGATGGATGCAATTTTAAATAAGGATGCTATGGATGACAAGAAGACAATTGATAAGCTTCTTGGAAAGCACATTAGGTCAAGTCAGTTTGACTTCTCTCAGGTTCTTGCTAGGTTATCTTTTATTTCTACTATGGGTCATGTGACTAGAGTCTCTCCCCACAGTTTGAGAAGTCCAGGAAAGTTAGTAGACGAAGACCATTACAACCTAGTCAGTGGGTGGGGTATGCTTTGTCCATGCGATACTCCAGAAGCGGCTGTTCCTACCAAGAAGTCCTACATTGTCTATTTGGGATCACACTCCTTTGGCCCAAATCCAAGTATATACGACGTCCAACTTGCAACCGAATCTCAATATGATATATTAGGATCCGTCAAGGGAAGCAAATTGGCAGCCAAAGAGTCAATTCTGTACTCCTACAATCGGTACATTAATGGCTTTTCTGCCGTTCTTAATCAACAAGAAGCCGCGGCTCTTGCGAAGAATCCAAGCGTGGTGTCGGTTTTTGAAAACAAGGAAAGAAAATTGCATACAACACGATCATGGGGTTTTCTGGGGGTTGATAGTGATCGAGGAATCCCTCAGAACTCCATTTGGAAGGCTGCTCGGTTTGGGAAAGATACCATCATAGGGAACCTCGACACGGGAGACTTCAGCTATCACATATATTGTGAAGGTGTCTGGCCAGAGTCCCCGAGCTTCAACGATGCAGGGTATGGCCCTGTTCCTTCAAGGTGGAGGGGAGCTTGTGAAGGCGGCTCCAAATTTCGATGCAACAGGAAGTTGATTGGAGCACGCTATTTCTACCGAGGATTTCTAACCGCCGAAGGTCCAGGTACAACGCACAACATCAGCTTCGACAGTGCACGAGACCATGAAGGCCATGGATCGCACACTTTGTCCACTGCGGGTGGCAACTTTGTCCATGGAGTCAATGTGTTTGGCAATGGCAATGGGACTGCAAGAGGAGGTTCCCCCAAGGCTCGTGTTGTTGCGTACAAGGTCTGCTGGCCTTCAAAAACTGGCGGCTGTTACGATTCCGACATCTTAGCAGGCATCGAAGCCGCTATCAGCGACGGTGCGGATGTTCTTTCGGCCTCTCTTGGCACGGCAGCTCAAGAGTTTGCTTATGACGCTATTTCGATAGGGGCGTTCCATGCGGTTCAACACGGAATCGTCGTGGTTTGCTCGGCTGGGAATGACGGCCCGTCTCCCGGGAGTGTGAGCAATGTGTCTCCTTGGATGGTCACTGTTGGAGCTAGTACCATCGACCGTGACTTTGTCAGTTATGTGGTCCTGGGGAACAAGAAGCGATTTAGGGGTTCAAGCCTTTCATCCAGTCGATTGCCGGCTGGTAAGTTTTACCCTTTGATAAAGGCTGTGCAAGTGAAAGCTGCCAATGCCACTGATGGGTTTGCCCAACTTTGCATGGATGGAACACTTGATCCCACAAAGGCAAAAGGCAAGATTATAGTTTGCCTTCGAGGAGAAAATGCAAGAGTGAGCAAGGGCTTCGAGGTTGTTCGTGTCGGTGGTGTCGGGATGGTTCTGGTAAATAAGCAGATGGACGGTTCAGCTCTTGTAGCTGATCCACACATACTTCCTGCTTCTCATCTAAGCTATGCGGATGGAGTTTCCATCGCTCAATATTTGAGCTCCACCAAAATACCCGTGGCTTCCATAACCCATGCAAGCACAGAGATGGGAATTAAACCATCGCCTCTCATGGCTTCATTTTCATCAAGAGGCCCTGATTTCATCACACAGGCTGTAATCAAGGTTGCATCAGGCTTGCCATTTGATAAACGTCGAGTGCCTTTTAACATCGAGTCTGGCACTTCCATGTCATGCCCACACATCTCAGGCGTTGCAGGCCTTCTAAAGACTCTGCATCCCACATGGAGTCCTGGCGCTATTAAATCTGCCATCATGACTACAGCCAAAACTAGAGACAACACCAAGAACACAATGTTGGACTTCAACAAAGTGAAGGCTACCCCATTTGATTATGGTGCAGGACATGTCCATCCAAACGATGCCATGGACCCCGGCCTCGTTTACGACACAACGGTTGATGACTATTTGAATTTCTTATGTACACGGGGCTACAACTCCCTCACACTCAAGAAATTCTCTAACAAGCCATTTGTTTGCGCCAAGAACTTTGCAACCACAGACTTCAACTATCCATCCATCTTGGTCCCCAGGTTGCAAATTGGTGAATCGGTGACGGTCAATAGAAGAGTCAAGAATGTGGGAAGCACAGGCACGTATGTGGCGCGGGTGAGGATGCCCAAGGGCATTACAGTTATGGTTGAGCCAAGTAAGTTGCAATTTCACAGCGTTGGAGAAGAGAAGCCTTTCAAACTTGTATTTCATTACGCACATAAATTGCGACGTGAAGGCTATGTTTTTGGGGCATTGGTATGGTCAGATGGGAAGCATTTTGTTAGGAGTTCTATTGCCGTGAATTTGGTTTGA | 2835 | 46.95 | MVVKPSDGDSKNGTQVDDPNVIDLDIDKKFLGLPIKSAVDKFQLIPAFFKYFATGMRMLKRAGKIGEFVNVFVNEKQIPGEPDGYNGTKSLFFVKQRKLVHKNNFLPRCIYVGVMMRQMMDAILNKDAMDDKKTIDKLLGKHIRSSQFDFSQVLARLSFISTMGHVTRVSPHSLRSPGKLVDEDHYNLVSGWGMLCPCDTPEAAVPTKKSYIVYLGSHSFGPNPSIYDVQLATESQYDILGSVKGSKLAAKESILYSYNRYINGFSAVLNQQEAAALAKNPSVVSVFENKERKLHTTRSWGFLGVDSDRGIPQNSIWKAARFGKDTIIGNLDTGDFSYHIYCEGVWPESPSFNDAGYGPVPSRWRGACEGGSKFRCNRKLIGARYFYRGFLTAEGPGTTHNISFDSARDHEGHGSHTLSTAGGNFVHGVNVFGNGNGTARGGSPKARVVAYKVCWPSKTGGCYDSDILAGIEAAISDGADVLSASLGTAAQEFAYDAISIGAFHAVQHGIVVVCSAGNDGPSPGSVSNVSPWMVTVGASTIDRDFVSYVVLGNKKRFRGSSLSSSRLPAGKFYPLIKAVQVKAANATDGFAQLCMDGTLDPTKAKGKIIVCLRGENARVSKGFEVVRVGGVGMVLVNKQMDGSALVADPHILPASHLSYADGVSIAQYLSSTKIPVASITHASTEMGIKPSPLMASFSSRGPDFITQAVIKVASGLPFDKRRVPFNIESGTSMSCPHISGVAGLLKTLHPTWSPGAIKSAIMTTAKTRDNTKNTMLDFNKVKATPFDYGAGHVHPNDAMDPGLVYDTTVDDYLNFLCTRGYNSLTLKKFSNKPFVCAKNFATTDFNYPSILVPRLQIGESVTVNRRVKNVGSTGTYVARVRMPKGITVMVEPSKLQFHSVGEEKPFKLVFHYAHKLRREGYVFGALVWSDGKHFVRSSIAVNLV | 944 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 3620868 | 3636732 | - | CmoCh06G007130.1 | Cmo06g00713 | 384275 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo06g00713 | 944 | Gene3D | - | 97 | 202 | - | - | |
Cmo06g00713 | 944 | Pfam | PA domain | 585 | 664 | IPR003137 | - | |
Cmo06g00713 | 944 | Gene3D | - | 542 | 686 | - | - | |
Cmo06g00713 | 944 | Pfam | Fibronectin type-III domain | 844 | 941 | IPR041469 | - | |
Cmo06g00713 | 944 | SUPERFAMILY | beta and beta-prime subunits of DNA dependent RNA-polymerase | 73 | 202 | - | - | |
Cmo06g00713 | 944 | PANTHER | SUBTILISIN-LIKE PROTEASE SBT5.4 | 209 | 943 | - | - | |
Cmo06g00713 | 944 | SUPERFAMILY | Subtilisin-like | 294 | 803 | IPR036852 | GO:0004252|GO:0006508 | |
Cmo06g00713 | 944 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 203 | 295 | IPR037045 | - | |
Cmo06g00713 | 944 | CDD | PA_subtilisin_like | 548 | 679 | - | - | |
Cmo06g00713 | 944 | Gene3D | - | 816 | 944 | - | - | |
Cmo06g00713 | 944 | Pfam | Peptidase inhibitor I9 | 210 | 295 | IPR010259 | - | |
Cmo06g00713 | 944 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 730 | 740 | IPR023828 | - | |
Cmo06g00713 | 944 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 209 | 943 | IPR045051 | - | |
Cmo06g00713 | 944 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 299 | 799 | - | - | |
Cmo06g00713 | 944 | Gene3D | Peptidase S8/S53 domain | 343 | 812 | IPR036852 | GO:0004252|GO:0006508 | |
Cmo06g00713 | 944 | Pfam | Subtilase family | 397 | 772 | IPR000209 | GO:0006508|GO:0008236 | |
Cmo06g00713 | 944 | Pfam | RNA polymerase Rpb2, domain 3 | 152 | 202 | IPR007645 | GO:0003677|GO:0003899|GO:0006351 | |
Cmo06g00713 | 944 | PRINTS | Subtilisin serine protease family (S8) signature | 409 | 422 | IPR015500 | - | |
Cmo06g00713 | 944 | PRINTS | Subtilisin serine protease family (S8) signature | 323 | 342 | IPR015500 | - | |
Cmo06g00713 | 944 | PRINTS | Subtilisin serine protease family (S8) signature | 729 | 745 | IPR015500 | - | |
Cmo06g00713 | 944 | CDD | Peptidases_S8_3 | 293 | 765 | IPR034197 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo04g01385 | Cmo-Chr4:7050794 | Cmo06g00713 | Cmo-Chr6:3620868 | 4.78E-15 | dispersed | |
Cmo06g00713 | Cmo-Chr6:3620868 | Cmo06g00715 | Cmo-Chr6:3644559 | 0 | dispersed | |
Cmo18g00826 | Cmo-Chr18:9647578 | Cmo06g00713 | Cmo-Chr6:3620868 | 4.92E-08 | dispersed | |
Cmo06g00709 | Cmo-Chr6:3607104 | Cmo06g00713 | Cmo-Chr6:3620868 | 0 | proximal | |
Cmo06g00710 | Cmo-Chr6:3612674 | Cmo06g00713 | Cmo-Chr6:3620868 | 0 | proximal | |
Cmo06g00712 | Cmo-Chr6:3617334 | Cmo06g00713 | Cmo-Chr6:3620868 | 6.66E-09 | tandem | |
Cmo06g00713 | Cmo-Chr6:3620868 | Cmo06g00714 | Cmo-Chr6:3638578 | 0 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo06g00713 | - | - | cmax:111498820 | 1354.73 |