Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo06g00715 AAAATGGCAGCGAAAGAATCGATTCTCTATACGTATAATAGATGTATTAATGGCTTTGCTGCTGTTCTTGATGACAATGAAGTCACAGCTCTTGCAAAGAATCCAAGTGTGGTGTCGGTTTTTGAAAATAGGGAAAGAAAATTGCATACAACACGATCATGGGGTTTTTTGGGGGTTGATAGTGGTCGAGGAATTCCTCAGAACTCCATTTGGAAGGCTTCCAAGTTTGGGGAAGATGTAATTATCGGGAACCTCGACACGGAGTCCGAGAGCTTCCACGATGCAGGCTATGGCCCTGTTCCTTCAAGGTGGATGGGAGCTTGTGAAGGCGGCTCCAAATTTCGATGCAACAGGAAGCTGATCGGAGCAAGATATTTCTACCGAGGATACGAAATGATCAACGGTCCTCTCAACATTAGCTCACTAAACGCACGAGACCATGAAGGCCATGGTACACACACATTGTCCACTGCCGGTGGCAACTTTGTCCAAGGAGCCAACGTGTTTGGCAATGGCAATGGGACAGCAAAAGGAGGCGCCCCCAAAGCTCGTGTTGCTGCCTACAAGGTATGCTGGCCTCAAGGCAAGTGTTCTGATGCCGATCTCTTAGCCGGTATCGAAGCCGCTATCAGCGACGGTGTCGACGTTCTCTCGATCTCTCTCGGTGCAACAGCTCAGGACTTTGCTAATGACCCAATTTCAGTAGGGGCATTCCATGCCATTCAACAAGGAATCATTGTAGTTTGCTCTGCCGGAAACGATGGCCCGCTCCCTGGGACTGTCACCAATGTATCTCCATGGATGTTCACTGTTGGAGCTAGTTCCATCGACCGAGGCTTCTTCAGTTACGTGTACCTCGGAAACAAGAAACAGATCAAGGGTTCGAGTCTTTCATCGGGAGGATTGCCTCGTGGTAAATTGTACCCTTTGATGAATTCTGTTAATGCAAAAGCTTCCAATGCCTCAGATGGACTTGCCCAACTTTGCGAGGAGGGATCACTTGATCCCATGAAGGCAAGAGGGAAGATTATAGTATGTCTTCGAGGAGACAACGGAAGAATGGACAAGAGTTTCGAGGTTCTTCGTGTCGGTGGTGTCGGTATGATTCTGGTTAACGACAAGATCAGCGGTTCGGGCATTGAAACTGATCCACACATGCTTCCTACTTCACATGTAAGCTATATTGATGGCCTCTCCATCGCTCAATATTTGAAATCCACCAAAAGGCCTGTGGCTACCATAACTCCGGTAAGGACAGAGATAGGGATTAAACCATCACCTGTCATGGCTACATTCTCGTCAAGAGGCCCTAATCACATAACAGAGGCCATCATCAAGGTTGGTTTTTTACCTGATATAACAGCACCGGGTGTGAATATAATCGCATCTTTCACGAGAGCGGCAGCAGCAACAGACTTGCCATTTGACAAACGTCGAGTGCCTTTCAACGTTCAATCCGGCACATCCATGTCATGCCCGCACATCTCAGGCGTTGCAGGCCTTCTTAAGAAACTTCATCCTACATGGAGTCCTGCCGCTATCAAATCTGCCATTATGACTACAGCCAAAACGAGAGACAACACCAAGAACACAATGTTGGACTTCAACAAAGTGAAGGCTACCCCATTTGATTATGGTGCAGGACTTGTCCATCCAAACAATGCCATGGACCCCGGCCTTGTTTATGACACGACGATTGATGACTACTTGAACTTCTTATGTACACAGGGCTATAACTCACTCACGCTCAAGAAATTCTCTAATAAGCCATTTGTTTGCTCTAAGAACTTCGCAATCACAGACCTCAACTATCCATCCATCTCGGTCCCCAAGTTGCAAATTGGGGCACCGGTGACGGTAAATAGAAGAGTGAAGAATGTGGGAAGCGCAGGCACGTATGTGGCGCGGGTGAGGATGCCCAAGGGCATTACAGTTATGGTTGAGCCAAGTACGTTGCAATTTCACGGCGTTGGAGAAGAGAAGCCTTTCAAACTTGTATTTCATTACGCACAACAAGTGCGGCGTCCTGGCTATGTTTTTGGGGCATTGGTATGGTCAGATGGGAAGCATTTTGTTAGAAGTCCTATTGCAGTGAATTTGAACCGTACATGA 2112 47.35 KMAAKESILYTYNRCINGFAAVLDDNEVTALAKNPSVVSVFENRERKLHTTRSWGFLGVDSGRGIPQNSIWKASKFGEDVIIGNLDTESESFHDAGYGPVPSRWMGACEGGSKFRCNRKLIGARYFYRGYEMINGPLNISSLNARDHEGHGTHTLSTAGGNFVQGANVFGNGNGTAKGGAPKARVAAYKVCWPQGKCSDADLLAGIEAAISDGVDVLSISLGATAQDFANDPISVGAFHAIQQGIIVVCSAGNDGPLPGTVTNVSPWMFTVGASSIDRGFFSYVYLGNKKQIKGSSLSSGGLPRGKLYPLMNSVNAKASNASDGLAQLCEEGSLDPMKARGKIIVCLRGDNGRMDKSFEVLRVGGVGMILVNDKISGSGIETDPHMLPTSHVSYIDGLSIAQYLKSTKRPVATITPVRTEIGIKPSPVMATFSSRGPNHITEAIIKVGFLPDITAPGVNIIASFTRAAAATDLPFDKRRVPFNVQSGTSMSCPHISGVAGLLKKLHPTWSPAAIKSAIMTTAKTRDNTKNTMLDFNKVKATPFDYGAGLVHPNNAMDPGLVYDTTIDDYLNFLCTQGYNSLTLKKFSNKPFVCSKNFAITDLNYPSISVPKLQIGAPVTVNRRVKNVGSAGTYVARVRMPKGITVMVEPSTLQFHGVGEEKPFKLVFHYAQQVRRPGYVFGALVWSDGKHFVRSPIAVNLNRT 703
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3644559 3648203 - CmoCh06G007150.1 Cmo06g00715 384277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo06g00715 703 PRINTS Subtilisin serine protease family (S8) signature 486 502 IPR015500 -
Cmo06g00715 703 PRINTS Subtilisin serine protease family (S8) signature 77 96 IPR015500 -
Cmo06g00715 703 PRINTS Subtilisin serine protease family (S8) signature 146 159 IPR015500 -
Cmo06g00715 703 ProSiteProfiles Serine proteases, subtilase domain profile. 53 556 - -
Cmo06g00715 703 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 701 IPR045051 -
Cmo06g00715 703 Pfam PA domain 329 399 IPR003137 -
Cmo06g00715 703 SUPERFAMILY Subtilisin-like 48 560 IPR036852 GO:0004252|GO:0006508
Cmo06g00715 703 Pfam Peptidase inhibitor I9 4 49 IPR010259 -
Cmo06g00715 703 Pfam Subtilase family 125 529 IPR000209 GO:0006508|GO:0008236
Cmo06g00715 703 Pfam Fibronectin type-III domain 601 698 IPR041469 -
Cmo06g00715 703 Gene3D - 573 700 - -
Cmo06g00715 703 ProSitePatterns Serine proteases, subtilase family, serine active site. 487 497 IPR023828 -
Cmo06g00715 703 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 2 701 - -
Cmo06g00715 703 CDD PA_subtilisin_like 283 414 - -
Cmo06g00715 703 Gene3D - 277 421 - -
Cmo06g00715 703 CDD Peptidases_S8_3 47 522 IPR034197 -
Cmo06g00715 703 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 49 IPR037045 -
Cmo06g00715 703 Gene3D Peptidase S8/S53 domain 79 569 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo06g00713 Cmo-Chr6:3620868 Cmo06g00715 Cmo-Chr6:3644559 0 dispersed
Cmo06g00715 Cmo-Chr6:3644559 Cmo16g01018 Cmo-Chr16:7032614 0 dispersed
Cmo06g00714 Cmo-Chr6:3638578 Cmo06g00715 Cmo-Chr6:3644559 0 tandem
Cmo16g01027 Cmo-Chr16:7156450 Cmo06g00715 Cmo-Chr6:3644559 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo06g00715 - - cmax:111498820 1317.37