Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo06g00738 ATGTGGGTTCTTTTGATAGGAACTATTGTTGTTTTGAGCTTTACACACTGGCTTTACCGTTGGAGAAACCCCAAATGTAATGGGAAACTCCCACCAGGTTCAATGGGGTTCCCTCTGCTTGGTGAAACCTTCCAGTTCTTCGCTCCCAATACCTCCTCTGATGTCCCTCCTTTCATCAGAAACAGAGTGGATAGGTACGGACCAATCTTCAGAACAAGTTTGGTGGGAAGACCGCTGATTGTCTCAACCGACCCCGACTTCAATCACTTCATCTTTCAACAAGAGGGTCACTTGTTCCAGAGCTGGTATCCATCTACCTTCACCGAGATACTTGGAAGGAAAAATGTTGGTTCTTTGCACGGTTTCATGCATAAGTTTGTGAAGAACATGGTTCTTCATCTTGTTGGCCCTGAAAATCTGAGGAAGATGATATCTGAAGTGGAGGCTGTAGCTACCACAAGATTGACACAATGGTCATCTCTTGAATCGGTTGAATTGAAGGATGAGACTGCAAGTATGATTTTTAATCTGACTGCAAAGAAGCTGATTAGTTATGATTCAGAAAATTCTGAAGAGAATTTGAGAGACAACTTTGTTGCCTTCATTCAGGGGTTGATTTCCTTCCCTCTAAATGTTTTTGGAACAGCTTATAACAAATGCTTACAGGGCAGGAAAAGAGCGATGAGGATGCTGAAAAACATGTTGCAAGAAAGGCGTGCAAATCCAAGGAAAGAGCAAACAGATTTTTTTGATTTTGTTCTTGAAGAACTGGCAAAGGATGGAACTCTTCTCACAGAGGAAATTGCTCTGGACCTCATCTTTGTGCTGCTTTTTGCGAGCTTCGAAACAACTTCACTTGCTATTACATTAGCCATTAAATTCCTCCTCAACAATCCTCATGTGCTGGAGGAGCTGACGTGTGAACATGAGGGGATATTGAAGGCAAGGGAGAATCCAGATTGTGGGCTTACATGGGGAGAATACAAATCCATGACATTCACATTTCAGTTCATCAATGAAACTGTGAGACTGGCAAATATAGCTCCGGGAATCTTTCGAAAAGCTCTGAGAGACATCCCGTTTAAGGGATATACCATTCCAGCTGGGTGGTCTGTTATGGTCTGCCCTCCTGCCGTGCACTTGAATCCTGAAATATATGTTGATCCTCTCGCTTTTAATCCATGGCGGTGGAAGAAATCCAAATTGAATGGAGCATCTAAACATTTCATGGCTTTTGGTGGGGGAATGAGGTTCTGTGTTGGTACAGATTTTTCCAAACTTCAAATGGCTGTGTTTCTCCACTGCCTGGTTACAAAGTACACGTTCAAAGCAATCAAGGGAGGCAATATCGTCCGAACGCCCGGTTTACAGTTTCCCGACGGCTTACACGTTCAAATCGTGGAGAAATGA 1410 43.26 MWVLLIGTIVVLSFTHWLYRWRNPKCNGKLPPGSMGFPLLGETFQFFAPNTSSDVPPFIRNRVDRYGPIFRTSLVGRPLIVSTDPDFNHFIFQQEGHLFQSWYPSTFTEILGRKNVGSLHGFMHKFVKNMVLHLVGPENLRKMISEVEAVATTRLTQWSSLESVELKDETASMIFNLTAKKLISYDSENSEENLRDNFVAFIQGLISFPLNVFGTAYNKCLQGRKRAMRMLKNMLQERRANPRKEQTDFFDFVLEELAKDGTLLTEEIALDLIFVLLFASFETTSLAITLAIKFLLNNPHVLEELTCEHEGILKARENPDCGLTWGEYKSMTFTFQFINETVRLANIAPGIFRKALRDIPFKGYTIPAGWSVMVCPPAVHLNPEIYVDPLAFNPWRWKKSKLNGASKHFMAFGGGMRFCVGTDFSKLQMAVFLHCLVTKYTFKAIKGGNIVRTPGLQFPDGLHVQIVEK 469
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3817738 3821441 + CmoCh06G007380.1 Cmo06g00738 384300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo06g00738 469 PRINTS P450 superfamily signature 279 296 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo06g00738 469 PRINTS P450 superfamily signature 336 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo06g00738 469 PRINTS P450 superfamily signature 410 419 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo06g00738 469 PRINTS P450 superfamily signature 419 430 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo06g00738 469 Pfam Cytochrome P450 31 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo06g00738 469 PANTHER CYTOCHROME P450 26 8 466 - -
Cmo06g00738 469 SUPERFAMILY Cytochrome P450 27 466 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo06g00738 469 Gene3D Cytochrome P450 22 468 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo06g00738 469 PRINTS E-class P450 group IV signature 57 80 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo06g00738 469 PRINTS E-class P450 group IV signature 331 347 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo06g00738 469 PRINTS E-class P450 group IV signature 364 378 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo06g00738 469 PRINTS E-class P450 group IV signature 380 398 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo06g00738 469 PRINTS E-class P450 group IV signature 403 419 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo06g00738 469 PRINTS E-class P450 group IV signature 419 437 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo06g00738 469 PANTHER CYTOCHROME P450, FAMILY 87, SUBFAMILY A, POLYPEPTIDE 2 8 466 - -
Cmo06g00738 469 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 412 421 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo06g00738 Cmo-Chr6:3817738 Cmo16g01056 Cmo-Chr16:7421563 0 dispersed
Cmo06g00736 Cmo-Chr6:3799712 Cmo06g00738 Cmo-Chr6:3817738 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo06g00738 - - csv:101209473 847.425