Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo06g00914 ATGGGTCCCATACCCTTGACATTTTCAAACTTGACAGCTATGAATGAGTTGAGAATTGGTGATTTATCAAATGGGAGATCGTCCCTAGAATTTATCAAGAAAATGACATCTTTGAAGACCTTAGTATTGAGAAATAATAAGATATCAGATACAATTCCTACCTACATTGAAGAGTTTAAAGAATTGAGCCTGCTAGACTTAAGCTTTAACGAGTTATGGGGAGAGATTCCAAAGTCACTTTTCAAGTTGAATTCGCTAAGATACTTGTTTCTTGGAAATAACCAGTTAACTGGTACGCTACCTTCAGAAAAGCCTGGTTATCTTCTTAGCATAGACTTATCATACAATGGTTTATCGGGTAGCTTTCCTGACTGGGTCGATGAGGATTCAGCCAAGCATTTAAATTTAGTTGCCAACAACTTCACGTTTGGAACATCACATATTGGCCATTTCCCTACGGGTTTGAACTGTCTTCGACGAGAATTTTCTTGTAATCAAGCTTCTGAACTCCGTCCTAGTTTTGGGATCAACTGTGGGGGTCCAAAATTTGAGAGTTCCTCTCAGGAGTATGAAAGGGAAATTGAGATTGATGGTATGGCTTCATACTATGTTAGTGACTCAGAAACTTGGGCTGTTAGTGATGTTGGATACTTTCCTGAGATCAACAAAAACTCTAGTCAATATAACAGATACAATGACACGGAACATCCAATTGCAAATACAAATGATTCAGACCTTTTTCAGACACAAGAATTATCTACTTCGTCGTTGAGATTTTATGGTCTAGAGCTTAAAAATGGGAACTACACTGTGAAGCTTCACTTTGCAGAACATGCTTTCGCAGATTCATCTACATGGAGCAGCCTTGGGAGGCGTGTCTTTGATATATATATTCAGGGGAACCGGGTTTTCAAAGATTTTAATATTCAAAACGAGGCAGGTGGGTCTTTTCGTGCTGTTACAAAGATATTTAAGGCACAAGTTTCAGCAAACTACATGGAAATTCATCTTTTTTGGGCTGGGAAAGGTACTTGCTGCATACCTGACGAAGGTACTTATGGACCTTCTATTTCAGCAATCAGTGCAAGTCTAGATTCTGAACCTGTAAGTAATGTGAAGAATGGAACCAGTGAAATAAAGGGGACTGGTAGTCACAAGAATGAAGCCAGTCTAATAGTGGGGATTGTTGTTGGTGTAGGATTTGTTTGCTTTCTAGTTGTCACAATTTTCATTCTTTTTCAAAGAAGGAAAGGACGCTCCTTGGAAGATGAAGAGCTCTTTGGAATTGATGAAAGACCGCACACTTTTAGTTATTCTGAACTCAGGAATGCTACAGAGGATTTTAGTTCATCCAACAAACTCGGAGAAGGAGGTTTTGGACCGGTTACCAAGGGAATTCTAAATGATGGAAGAGTAATCGCTGTAAAGCAACTTTCAATAAAATCTGACCAAGGAAGAAACCAGTTTTTGGCTGAGATTTCTACAATATCTGCCGTGCAACATCGCAACCTTGTGAAGTTGTATGGTTGTTGCATTGAGGGTCAAAAACGTCTCCTTGTTTATGAGTACCTGGAGAAAAAGAGTCTCGACCAAGCATTATTTGGAAAACGAACTTTCGTTCTTGATTGGCCAAAACGATTTGCTATATGCATGGGTGTCGCGAGAGGCCTAACATATCTTCATGAGGAATCGAGACTTCGAATTGTTCATAGAGATATTAAAGCCAGTAACATTCTACTTGATGCTGATCTCAACCCCAAAATTTCAGATTTTGGGTTAGCGAAGCTTTATGATGACAAAAAGACTCATATGAGCACCCTTGTTGCTGGAACAATTGGATATCTTGCACCTGAGTATGCCATGCGTGGGCATCTAACTGAGAAGGCTGATGTCTTTAGTTTTGGTGTTGTGGCTCTTGAAATTGTTAGCGGTAGGCCAAATTCGGCCCCAGGCTTGGAGGAGGACAGAGTTTTTCTACTTGAATGGGCTTGGTATCTGTATGAAAACGATCGTGAAATTGAGTTGGTAGATTCTGATTTGTCCACATTCAATGAGGATGAAGTTAAGCGGGTGATCAGAGTAGGTCTTATGTGCACTCAAACGTCCTCAGGTCGTCGGCCATCGATGTCACGAGTGGTGGCAATGCTGTGTGGAGATATTGAAGTGGCAAGTGTTGTGCGCCGAAAGCGGAACAAATGCACATTTACGAATGATACTACAACAACCACAGCCTCCGACACTACCCATCAGGGCAGTTCGAGTATTGGCATCCGTGCTAATAATTGA 2286 40.68 MGPIPLTFSNLTAMNELRIGDLSNGRSSLEFIKKMTSLKTLVLRNNKISDTIPTYIEEFKELSLLDLSFNELWGEIPKSLFKLNSLRYLFLGNNQLTGTLPSEKPGYLLSIDLSYNGLSGSFPDWVDEDSAKHLNLVANNFTFGTSHIGHFPTGLNCLRREFSCNQASELRPSFGINCGGPKFESSSQEYEREIEIDGMASYYVSDSETWAVSDVGYFPEINKNSSQYNRYNDTEHPIANTNDSDLFQTQELSTSSLRFYGLELKNGNYTVKLHFAEHAFADSSTWSSLGRRVFDIYIQGNRVFKDFNIQNEAGGSFRAVTKIFKAQVSANYMEIHLFWAGKGTCCIPDEGTYGPSISAISASLDSEPVSNVKNGTSEIKGTGSHKNEASLIVGIVVGVGFVCFLVVTIFILFQRRKGRSLEDEELFGIDERPHTFSYSELRNATEDFSSSNKLGEGGFGPVTKGILNDGRVIAVKQLSIKSDQGRNQFLAEISTISAVQHRNLVKLYGCCIEGQKRLLVYEYLEKKSLDQALFGKRTFVLDWPKRFAICMGVARGLTYLHEESRLRIVHRDIKASNILLDADLNPKISDFGLAKLYDDKKTHMSTLVAGTIGYLAPEYAMRGHLTEKADVFSFGVVALEIVSGRPNSAPGLEEDRVFLLEWAWYLYENDREIELVDSDLSTFNEDEVKRVIRVGLMCTQTSSGRRPSMSRVVAMLCGDIEVASVVRRKRNKCTFTNDTTTTTASDTTHQGSSSIGIRANN 761
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6442327 6452534 - CmoCh06G009140.1 Cmo06g00914 384476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo06g00914 761 MobiDBLite consensus disorder prediction 737 761 - -
Cmo06g00914 761 Pfam Malectin domain 175 360 IPR021720 -
Cmo06g00914 761 Gene3D - 178 363 - -
Cmo06g00914 761 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 14 723 - -
Cmo06g00914 761 CDD STKc_IRAK 454 718 - -
Cmo06g00914 761 Pfam Protein tyrosine and serine/threonine kinase 451 715 IPR001245 GO:0004672|GO:0006468
Cmo06g00914 761 SUPERFAMILY Protein kinase-like (PK-like) 430 716 IPR011009 -
Cmo06g00914 761 Gene3D Phosphorylase Kinase; domain 1 412 523 - -
Cmo06g00914 761 Gene3D Ribonuclease Inhibitor 1 177 IPR032675 -
Cmo06g00914 761 Gene3D Transferase(Phosphotransferase) domain 1 524 739 - -
Cmo06g00914 761 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 14 723 - -
Cmo06g00914 761 ProSitePatterns Serine/Threonine protein kinases active-site signature. 568 580 IPR008271 GO:0004672|GO:0006468
Cmo06g00914 761 SUPERFAMILY L domain-like 3 157 - -
Cmo06g00914 761 SMART serkin_6 448 716 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo06g00914 761 Pfam Leucine rich repeat 37 96 IPR001611 GO:0005515
Cmo06g00914 761 ProSiteProfiles Protein kinase domain profile. 448 722 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo06g00914 Cmo-Chr6:6442327 Cmo19g01123 Cmo-Chr19:9513633 0 dispersed
Cmo06g00914 Cmo-Chr6:6442327 Cmo09g00654 Cmo-Chr9:3265759 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74418 PF07714 PK_Tyr_Ser-Thr 5.40E-46 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo06g00914 - - cpep:111786384 1149.04