Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo06g00914 | ATGGGTCCCATACCCTTGACATTTTCAAACTTGACAGCTATGAATGAGTTGAGAATTGGTGATTTATCAAATGGGAGATCGTCCCTAGAATTTATCAAGAAAATGACATCTTTGAAGACCTTAGTATTGAGAAATAATAAGATATCAGATACAATTCCTACCTACATTGAAGAGTTTAAAGAATTGAGCCTGCTAGACTTAAGCTTTAACGAGTTATGGGGAGAGATTCCAAAGTCACTTTTCAAGTTGAATTCGCTAAGATACTTGTTTCTTGGAAATAACCAGTTAACTGGTACGCTACCTTCAGAAAAGCCTGGTTATCTTCTTAGCATAGACTTATCATACAATGGTTTATCGGGTAGCTTTCCTGACTGGGTCGATGAGGATTCAGCCAAGCATTTAAATTTAGTTGCCAACAACTTCACGTTTGGAACATCACATATTGGCCATTTCCCTACGGGTTTGAACTGTCTTCGACGAGAATTTTCTTGTAATCAAGCTTCTGAACTCCGTCCTAGTTTTGGGATCAACTGTGGGGGTCCAAAATTTGAGAGTTCCTCTCAGGAGTATGAAAGGGAAATTGAGATTGATGGTATGGCTTCATACTATGTTAGTGACTCAGAAACTTGGGCTGTTAGTGATGTTGGATACTTTCCTGAGATCAACAAAAACTCTAGTCAATATAACAGATACAATGACACGGAACATCCAATTGCAAATACAAATGATTCAGACCTTTTTCAGACACAAGAATTATCTACTTCGTCGTTGAGATTTTATGGTCTAGAGCTTAAAAATGGGAACTACACTGTGAAGCTTCACTTTGCAGAACATGCTTTCGCAGATTCATCTACATGGAGCAGCCTTGGGAGGCGTGTCTTTGATATATATATTCAGGGGAACCGGGTTTTCAAAGATTTTAATATTCAAAACGAGGCAGGTGGGTCTTTTCGTGCTGTTACAAAGATATTTAAGGCACAAGTTTCAGCAAACTACATGGAAATTCATCTTTTTTGGGCTGGGAAAGGTACTTGCTGCATACCTGACGAAGGTACTTATGGACCTTCTATTTCAGCAATCAGTGCAAGTCTAGATTCTGAACCTGTAAGTAATGTGAAGAATGGAACCAGTGAAATAAAGGGGACTGGTAGTCACAAGAATGAAGCCAGTCTAATAGTGGGGATTGTTGTTGGTGTAGGATTTGTTTGCTTTCTAGTTGTCACAATTTTCATTCTTTTTCAAAGAAGGAAAGGACGCTCCTTGGAAGATGAAGAGCTCTTTGGAATTGATGAAAGACCGCACACTTTTAGTTATTCTGAACTCAGGAATGCTACAGAGGATTTTAGTTCATCCAACAAACTCGGAGAAGGAGGTTTTGGACCGGTTACCAAGGGAATTCTAAATGATGGAAGAGTAATCGCTGTAAAGCAACTTTCAATAAAATCTGACCAAGGAAGAAACCAGTTTTTGGCTGAGATTTCTACAATATCTGCCGTGCAACATCGCAACCTTGTGAAGTTGTATGGTTGTTGCATTGAGGGTCAAAAACGTCTCCTTGTTTATGAGTACCTGGAGAAAAAGAGTCTCGACCAAGCATTATTTGGAAAACGAACTTTCGTTCTTGATTGGCCAAAACGATTTGCTATATGCATGGGTGTCGCGAGAGGCCTAACATATCTTCATGAGGAATCGAGACTTCGAATTGTTCATAGAGATATTAAAGCCAGTAACATTCTACTTGATGCTGATCTCAACCCCAAAATTTCAGATTTTGGGTTAGCGAAGCTTTATGATGACAAAAAGACTCATATGAGCACCCTTGTTGCTGGAACAATTGGATATCTTGCACCTGAGTATGCCATGCGTGGGCATCTAACTGAGAAGGCTGATGTCTTTAGTTTTGGTGTTGTGGCTCTTGAAATTGTTAGCGGTAGGCCAAATTCGGCCCCAGGCTTGGAGGAGGACAGAGTTTTTCTACTTGAATGGGCTTGGTATCTGTATGAAAACGATCGTGAAATTGAGTTGGTAGATTCTGATTTGTCCACATTCAATGAGGATGAAGTTAAGCGGGTGATCAGAGTAGGTCTTATGTGCACTCAAACGTCCTCAGGTCGTCGGCCATCGATGTCACGAGTGGTGGCAATGCTGTGTGGAGATATTGAAGTGGCAAGTGTTGTGCGCCGAAAGCGGAACAAATGCACATTTACGAATGATACTACAACAACCACAGCCTCCGACACTACCCATCAGGGCAGTTCGAGTATTGGCATCCGTGCTAATAATTGA | 2286 | 40.68 | MGPIPLTFSNLTAMNELRIGDLSNGRSSLEFIKKMTSLKTLVLRNNKISDTIPTYIEEFKELSLLDLSFNELWGEIPKSLFKLNSLRYLFLGNNQLTGTLPSEKPGYLLSIDLSYNGLSGSFPDWVDEDSAKHLNLVANNFTFGTSHIGHFPTGLNCLRREFSCNQASELRPSFGINCGGPKFESSSQEYEREIEIDGMASYYVSDSETWAVSDVGYFPEINKNSSQYNRYNDTEHPIANTNDSDLFQTQELSTSSLRFYGLELKNGNYTVKLHFAEHAFADSSTWSSLGRRVFDIYIQGNRVFKDFNIQNEAGGSFRAVTKIFKAQVSANYMEIHLFWAGKGTCCIPDEGTYGPSISAISASLDSEPVSNVKNGTSEIKGTGSHKNEASLIVGIVVGVGFVCFLVVTIFILFQRRKGRSLEDEELFGIDERPHTFSYSELRNATEDFSSSNKLGEGGFGPVTKGILNDGRVIAVKQLSIKSDQGRNQFLAEISTISAVQHRNLVKLYGCCIEGQKRLLVYEYLEKKSLDQALFGKRTFVLDWPKRFAICMGVARGLTYLHEESRLRIVHRDIKASNILLDADLNPKISDFGLAKLYDDKKTHMSTLVAGTIGYLAPEYAMRGHLTEKADVFSFGVVALEIVSGRPNSAPGLEEDRVFLLEWAWYLYENDREIELVDSDLSTFNEDEVKRVIRVGLMCTQTSSGRRPSMSRVVAMLCGDIEVASVVRRKRNKCTFTNDTTTTTASDTTHQGSSSIGIRANN | 761 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 6442327 | 6452534 | - | CmoCh06G009140.1 | Cmo06g00914 | 384476 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo06g00914 | 761 | MobiDBLite | consensus disorder prediction | 737 | 761 | - | - | |
Cmo06g00914 | 761 | Pfam | Malectin domain | 175 | 360 | IPR021720 | - | |
Cmo06g00914 | 761 | Gene3D | - | 178 | 363 | - | - | |
Cmo06g00914 | 761 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 14 | 723 | - | - | |
Cmo06g00914 | 761 | CDD | STKc_IRAK | 454 | 718 | - | - | |
Cmo06g00914 | 761 | Pfam | Protein tyrosine and serine/threonine kinase | 451 | 715 | IPR001245 | GO:0004672|GO:0006468 | |
Cmo06g00914 | 761 | SUPERFAMILY | Protein kinase-like (PK-like) | 430 | 716 | IPR011009 | - | |
Cmo06g00914 | 761 | Gene3D | Phosphorylase Kinase; domain 1 | 412 | 523 | - | - | |
Cmo06g00914 | 761 | Gene3D | Ribonuclease Inhibitor | 1 | 177 | IPR032675 | - | |
Cmo06g00914 | 761 | Gene3D | Transferase(Phosphotransferase) domain 1 | 524 | 739 | - | - | |
Cmo06g00914 | 761 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED | 14 | 723 | - | - | |
Cmo06g00914 | 761 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 568 | 580 | IPR008271 | GO:0004672|GO:0006468 | |
Cmo06g00914 | 761 | SUPERFAMILY | L domain-like | 3 | 157 | - | - | |
Cmo06g00914 | 761 | SMART | serkin_6 | 448 | 716 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo06g00914 | 761 | Pfam | Leucine rich repeat | 37 | 96 | IPR001611 | GO:0005515 | |
Cmo06g00914 | 761 | ProSiteProfiles | Protein kinase domain profile. | 448 | 722 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo06g00914 | Cmo-Chr6:6442327 | Cmo19g01123 | Cmo-Chr19:9513633 | 0 | dispersed | |
Cmo06g00914 | Cmo-Chr6:6442327 | Cmo09g00654 | Cmo-Chr9:3265759 | 0 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
74418 | PF07714 | PK_Tyr_Ser-Thr | 5.40E-46 | CL0016 | Cmo | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo06g00914 | - | - | cpep:111786384 | 1149.04 |