Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo06g00928 ATGGGTTTCTTAGTTTCTCTCTTCAAACAGAAGGGTTTTGTTATTTTCTTGAATCTCTCGATTCTCTCACTGGCCTGTGCTTTTTTAGCGATTCGATTTCACTATCCAGAAGAAACCCAATTCCGTGTTCTTAACAAGAGCTTCAGAAAACTCCATGGCACTGCTCAGGAAGATTGCCGGAATTTTATTGGTCTACCTGACTTTGAAGCTAAGTGCTCTGTTCTTAAATCCAACAACCCTTGTAACACCCAAGGCTATATAGATTATCTTAATGTTTTCTATTGTCAGTATGGAAGTTTTAGCATTCTGGGCTATACTCTGTTGTTTCTGTGGCTTCTTGTGTTGTTCTATCTTTTGGGTAACACTGCTTCTGAATACTTTTGCTCTTCCCTTGAGAGTTTGTCGAAATTGTTGAATCTATCCCCAACAATTGCTGGTGTTACTCTGCTTTCTTTGGGTAATGGCGCACCTGATGTTTTTTCCAGCCTTGTTGCTTTCATGGGAGATGGAACTACTGATATTGGCTTGAATACTGTTCTTGGTGGAGCCTCGTTTGTTACCTGCGTCGTTGTCGGAATCATAAGCATTTTGCTGCGTTTTCGACGGATTAAGGTTAATAGGGTTGCCTTCATTAGAGATGTTTTGTTCTTCCTCTTGGTTCTTTTGTCTGTTTTTTTGATATTGCTTCATGGACATATCAATCTGTGGGGTTCCCTTGCCTTTTCTTCCATGTATCTTGTTTACGTTTTGGTTGTTTATGTCTCCCATGCCCAATGGCTTAGTTTGAGAAGGGATATTTTCCAACCCCTTTTGAAAGAGCCACCAAAGGATGAGTCTGAGGGCCAAAATGACGATGACGACAACGACGACGGTGTTAGAATCGACATATACGATGTCTGTTTTTGTCCTAGTTTTTCGCCTTCTTGTGTTTTTTTCCTTCGCCTTCTTGAGATTCCTCTTTACTTGCCTAGAAGGCTGACAATTCCCACTATTGCTGAAGAAAACTGGTGTAGACTGTACGCAGTTGCTTCAGTGACATTAGCTCCCATTCTCTTAGCTTTTCTATGGGCATTTCACCACCAGATCGATATGTCTCAGTCGAACGTTATCATCTGCATCGTCGCCTTGCTGGTCGGAGTTAGTTTTGGAATTGTTGCATTTGTGACAACTGAGAATTCAAGCCCACCAAAGAAGTGGCTGTTCCCATGGCTTGCAGCTGGGTTCACCATGAGTTTAACATGGAGTTATATTATAGCTCAGGAACTGGTAGGGCTATTGGTTTCACTTGGCTACATAATGGGCATAAGCCCTTCAATTCTAGGACTGACCTTCCTGGCTTGGGGAAACTCTCTTGGGGATTTAGTTTCCAATGTGACCATGGCCATGAACGGCGGGCAGCGAGGCTCCCAAATAGCCATCTCCGGCTGCTACGCCGGCCCCATCTTCAGCACGCTGTTCGGCCTTGGGATGTCCCTTGTCAGCGCTTCATGGAAGAAGTATCCGGAGCCGGTGGCCATCCCGGCTGACCCTTACGTGATGGAGACATTGGGGCTGTTGGTAGGAGGGCTGCTATGGGCGCTTGTAAGTTTGCCAAGGAGAGAGATGAGGGTTGATGCAGTGTTGGGAGGAGGCCTTCTGGCTATCTATTTGACCTCTTTGCTCTTAAGAGTGTTGCAAGCTCTTGGGTCTTCCCATTAG 1698 44.88 MGFLVSLFKQKGFVIFLNLSILSLACAFLAIRFHYPEETQFRVLNKSFRKLHGTAQEDCRNFIGLPDFEAKCSVLKSNNPCNTQGYIDYLNVFYCQYGSFSILGYTLLFLWLLVLFYLLGNTASEYFCSSLESLSKLLNLSPTIAGVTLLSLGNGAPDVFSSLVAFMGDGTTDIGLNTVLGGASFVTCVVVGIISILLRFRRIKVNRVAFIRDVLFFLLVLLSVFLILLHGHINLWGSLAFSSMYLVYVLVVYVSHAQWLSLRRDIFQPLLKEPPKDESEGQNDDDDNDDGVRIDIYDVCFCPSFSPSCVFFLRLLEIPLYLPRRLTIPTIAEENWCRLYAVASVTLAPILLAFLWAFHHQIDMSQSNVIICIVALLVGVSFGIVAFVTTENSSPPKKWLFPWLAAGFTMSLTWSYIIAQELVGLLVSLGYIMGISPSILGLTFLAWGNSLGDLVSNVTMAMNGGQRGSQIAISGCYAGPIFSTLFGLGMSLVSASWKKYPEPVAIPADPYVMETLGLLVGGLLWALVSLPRREMRVDAVLGGGLLAIYLTSLLLRVLQALGSSH 565
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6744900 6746597 - CmoCh06G009280.1 Cmo06g00928 384490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo06g00928 565 PANTHER CATION/CALCIUM EXCHANGER 2 8 563 - -
Cmo06g00928 565 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 8 563 - -
Cmo06g00928 565 Gene3D - 140 265 IPR044880 -
Cmo06g00928 565 Gene3D - 339 557 IPR044880 -
Cmo06g00928 565 Pfam Sodium/calcium exchanger protein 109 253 IPR004837 GO:0016021|GO:0055085
Cmo06g00928 565 Pfam Sodium/calcium exchanger protein 404 555 IPR004837 GO:0016021|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo06g00928 Cmo-Chr6:6744900 Cmo11g00751 Cmo-Chr11:3657769 8.84E-114 dispersed
Cmo14g00537 Cmo-Chr14:2725485 Cmo06g00928 Cmo-Chr6:6744900 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo06g00928 K13754 - csv:101204766 877.47