Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo06g00951 | ATGGAAGAAGAGTTTTCAAAACAAAAGCTAGAACTCGACGGTTACAATGATAACGGAGATTCTAAGTTATCTTGGTGGAAAAGGAAACTAACACTACTCAGTCTCGATTCATCAACTAGAAATGGTGAGAGATCGAGAGATGCAGAGAAGAACAATAGCGCAAACTTCAGATCTCTAAGTCAAATTGTCATTCATCCTCACGACTGGCGATACGTTCTTTGGACGCATTTCATTTTGGTATGGGCTGTGTACTCTTCCTTCTTTACGCCATTGGAATTCGGATTCTTCAGGGGTCTCCCCAAGAATCTCTTCCTCCTCGACGTTGCCGGCCAGATCGCCTTTCTCATCGATATCGCTGTTCACTTTTGTGTTGCCTATCGCGATTCCCATTCTTACCGCTTTGTCTACGACCGTAATCTCATCGCTATCAGATATTTGAAGTCTCGATTTGTGGTTGACTTAATGGGTTGTATGCCCTGGGACGCCATCTACAAGGCTTCTGGTAAGAAGGAGCTTGTGAGATATTTACTATGGATTCGGCTAAGTCGAGCCTTAAGAGTTACTGAATTCTTTGAGAAATTGGAGAAGGATATACGAATAAATTACCTTGGTACAAGAATTGCGAAGCTTTTTGTTGTGGAGCTTTATTGTACTCATACAGCTGCCTGTATTTTCTACTATCTTGCTACTACTCTACCTCCGTCAAAAGAAGGGTACACCTGGATAGGAAGCCTAAAGTTGGGGGACTATAGCTATTCAAACTTTAGAGAAATTGATCTTTGGAAGCGTTACATCACATCATTATATTTTGCTGTTGTAACTATGGCAACTGTTGGTTATGGTGACATGCATGCCGTCAATGTCAGGGAAATGATTTTTATCATGATTTTTATCTCCTTTGATATGATTCTTGGTTCTTATTTGCTTGGTAACATGGCAGCATTGATAGTAAAAGGATCAAAAACAGAAAAGTTTAGAGATAAAATGAAGGACGTTATTAAATACGTGAATAAAAATAAGCTCAATAGGAAATTAAGTAAAGACATCAAAGATCATCTTCAATTACAGTACTGCCACTCCTCTGAGTTTGGTGTTCTTCAAGATATTCCAGCTTCAATTCGTGCCAAGATATCACAGAAATTGTACGAGCCATACATTAAGGAAGTCTCTCTTTTCAAAGGTTGCTCTCAGGGATTCATAAAACGAATTGCAACCAAAGTTCGTGAAGAGGCTTTTTTCCCTGGACAAATGATTATTGAACGTGAAAACTTAGTTGACCAACTCTATGTTGTATGTCATGGTGAATTGGAGGAAGTTGAAAACTGGGATACTGAAGATGAAGAGTTAATTAGGTGTCTTGGAACATATAGCTCATTTGGCGAAATTTCTTTCCTTTGCAATTCTCCTCATCCTTACCATGTTCGGGTTCGTGAGTTTTCCAAGATCTTGCAACTCGATAAACTATCATTTAAAGAAACCTTGGAATTACACTTTTTAGATGGACAGATCATCTTAGACAATGCCCTTGAGGGAAAGGATTCCAACCAACAAGATCAAATTTTGGAATCTGACATAATTCTTTACATTCAAAAGCGTGAACTTGAGTTAGCCATTAAGGTCAACTGTGCTGCTCATGATGGGGATCTAAATCAACTCAAACGGTTGATTAAAGCAGGAGCAGATCCCAATAAAACAGATTATGATGGAAGATCGCCTCTGCATTTTGCTGCATCGAAAGGATATGAAGCTATTGCTTGTTTTCTTATTGAACAAGGAGCACAAGTTAATGTTCCAGATAAGTTTGGGAACATGCCTTTACTTGAAGCCATTCAGAATGGACATGAGCAAGTAGCTTCTTTACTTGCCAAAGCTGGAGCAACCATTGTTGCTAATGATGCTGGTGGACTTCTTTGTTCTACTGTCGCAAGAAGGGATTTGGGCTTTCTGAAAGGGCTTCTGGCTAATGGCATTGATCCAAATGCTAGAAACTATGATCAACGGACTCCACTTCACATAGCTGTCTCAGAAGGTTTGTATCCTTTTGCAGAGGTCCTATTAAATGCTGGAGCCAGTGTTTTTGCAACGGACAGATGGGGAAATACTCCGCTTGATGAAGCTCGTACCAGAGGAAATAAGAATTTGATCAGGCTACTTGAAGTTGCAAAAATTTTTCAGTCATCTGGAAACAACTCTGATATATCCGAAGAGATTGAAGGTACTAGTTGA | 2226 | 39.53 | MEEEFSKQKLELDGYNDNGDSKLSWWKRKLTLLSLDSSTRNGERSRDAEKNNSANFRSLSQIVIHPHDWRYVLWTHFILVWAVYSSFFTPLEFGFFRGLPKNLFLLDVAGQIAFLIDIAVHFCVAYRDSHSYRFVYDRNLIAIRYLKSRFVVDLMGCMPWDAIYKASGKKELVRYLLWIRLSRALRVTEFFEKLEKDIRINYLGTRIAKLFVVELYCTHTAACIFYYLATTLPPSKEGYTWIGSLKLGDYSYSNFREIDLWKRYITSLYFAVVTMATVGYGDMHAVNVREMIFIMIFISFDMILGSYLLGNMAALIVKGSKTEKFRDKMKDVIKYVNKNKLNRKLSKDIKDHLQLQYCHSSEFGVLQDIPASIRAKISQKLYEPYIKEVSLFKGCSQGFIKRIATKVREEAFFPGQMIIERENLVDQLYVVCHGELEEVENWDTEDEELIRCLGTYSSFGEISFLCNSPHPYHVRVREFSKILQLDKLSFKETLELHFLDGQIILDNALEGKDSNQQDQILESDIILYIQKRELELAIKVNCAAHDGDLNQLKRLIKAGADPNKTDYDGRSPLHFAASKGYEAIACFLIEQGAQVNVPDKFGNMPLLEAIQNGHEQVASLLAKAGATIVANDAGGLLCSTVARRDLGFLKGLLANGIDPNARNYDQRTPLHIAVSEGLYPFAEVLLNAGASVFATDRWGNTPLDEARTRGNKNLIRLLEVAKIFQSSGNNSDISEEIEGTS | 741 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 7368874 | 7394618 | + | CmoCh06G009510.1 | Cmo06g00951 | 384513 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo06g00951 | 741 | PANTHER | POTASSIUM CHANNEL AKT1 | 68 | 727 | IPR045319 | GO:0005249|GO:0006813 | |
Cmo06g00951 | 741 | Gene3D | - | 512 | 638 | IPR036770 | - | |
Cmo06g00951 | 741 | ProSiteProfiles | cAMP/cGMP binding motif profile. | 391 | 494 | IPR000595 | - | |
Cmo06g00951 | 741 | CDD | CAP_ED | 391 | 505 | IPR000595 | - | |
Cmo06g00951 | 741 | ProSiteProfiles | Ankyrin repeat profile. | 601 | 633 | IPR002110 | GO:0005515 | |
Cmo06g00951 | 741 | Pfam | Cyclic nucleotide-binding domain | 412 | 495 | IPR000595 | - | |
Cmo06g00951 | 741 | Gene3D | Jelly Rolls | 378 | 503 | IPR014710 | - | |
Cmo06g00951 | 741 | SUPERFAMILY | Voltage-gated potassium channels | 65 | 317 | - | - | |
Cmo06g00951 | 741 | ProSiteProfiles | Ankyrin repeat region circular profile. | 568 | 600 | - | - | |
Cmo06g00951 | 741 | ProSiteProfiles | Ankyrin repeat profile. | 665 | 697 | IPR002110 | GO:0005515 | |
Cmo06g00951 | 741 | Gene3D | Helix hairpin bin | 319 | 377 | - | - | |
Cmo06g00951 | 741 | SMART | ANK_2a | 601 | 630 | IPR002110 | GO:0005515 | |
Cmo06g00951 | 741 | SMART | ANK_2a | 533 | 564 | IPR002110 | GO:0005515 | |
Cmo06g00951 | 741 | SMART | ANK_2a | 665 | 694 | IPR002110 | GO:0005515 | |
Cmo06g00951 | 741 | SMART | ANK_2a | 568 | 597 | IPR002110 | GO:0005515 | |
Cmo06g00951 | 741 | SMART | ANK_2a | 698 | 733 | IPR002110 | GO:0005515 | |
Cmo06g00951 | 741 | PRINTS | EAG/ELK/ERG potassium channel family signature | 107 | 117 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Cmo06g00951 | 741 | PRINTS | EAG/ELK/ERG potassium channel family signature | 216 | 226 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Cmo06g00951 | 741 | PRINTS | EAG/ELK/ERG potassium channel family signature | 264 | 281 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Cmo06g00951 | 741 | PRINTS | EAG/ELK/ERG potassium channel family signature | 308 | 317 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Cmo06g00951 | 741 | Pfam | Ankyrin repeats (many copies) | 652 | 706 | IPR002110 | GO:0005515 | |
Cmo06g00951 | 741 | ProSiteProfiles | Ankyrin repeat profile. | 568 | 600 | IPR002110 | GO:0005515 | |
Cmo06g00951 | 741 | ProSiteProfiles | Ankyrin repeat region circular profile. | 665 | 697 | - | - | |
Cmo06g00951 | 741 | PANTHER | CHANNEL AKT1 PROTEIN, PUTATIVE-RELATED | 68 | 727 | - | - | |
Cmo06g00951 | 741 | SMART | cnmp_10 | 391 | 512 | IPR000595 | - | |
Cmo06g00951 | 741 | Gene3D | - | 639 | 721 | IPR036770 | - | |
Cmo06g00951 | 741 | SUPERFAMILY | Ankyrin repeat | 540 | 718 | IPR036770 | - | |
Cmo06g00951 | 741 | Pfam | Ion transport protein | 73 | 316 | IPR005821 | GO:0005216|GO:0006811|GO:0016020|GO:0055085 | |
Cmo06g00951 | 741 | SUPERFAMILY | cAMP-binding domain-like | 320 | 507 | IPR018490 | - | |
Cmo06g00951 | 741 | Pfam | Ankyrin repeats (3 copies) | 543 | 632 | IPR002110 | GO:0005515 | |
Cmo06g00951 | 741 | Gene3D | - | 72 | 318 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo06g00951 | Cmo-Chr6:7368874 | Cmo15g00753 | Cmo-Chr15:3699749 | 2.66E-11 | dispersed | |
Cmo06g00951 | Cmo-Chr6:7368874 | Cmo04g02411 | Cmo-Chr4:17941080 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo06g00951 | K21867 | - | jre:108993203 | 984.556 |