Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo06g00995 | ATGGAACCATTTTTCAATTACATTCAAGCATCTGATGCGAAAGAAACCATCATTTGCAGCTCTTCCTCTGTCGCAACAAGCCATGGAAATGGACACATCTCTGACAACACAAAACAGAGGACCTCTGAGGAAGAAGATAAGAGCCACCATAATATGTTCAGAGGAGTTCGTAAACGAAACTGGGGCAAATGGGTTTCCGAGATTCGTGAGCCAAGGAAGAAGACCAGGATTTGGCTTGGAACTTACCCAACCGCCGAAATGGCAGCGCGAGCCCACGACGCCGCCGCTCTGGCCATAAAGGGTCACTCTGCATTTCTCAATTTCCCTGAATTGGCTCGGTTCCTTCCTCGCCCACTCTCCAAGTCCCATAAGGACATTCAGGCCGCGGCGGCGCAGGCGGCTGCCACCACATTTTCGGAGGGAAACAACCGTGAGGGTGAAGGAAGGGAAGCGGCGGAGAACATGGAGACTCTGTTTTCTGGTAGCGACGGCGGAGAAAGAGCAGAGGACTCCACGAACTCCCCGTCGACGGCCGCTAGTGATGAGACATTGTTCGATTTGCCTGATCTGTTCGTCGGAAGTTCTGATTTGAAAGATGGGTTTCTTTGTCATTCTTCGTTATGGCAGTTTTGTGCGGCGGCCGATCATTCTGGTTTCCGGCTGGAAGAGCCTTCGTTTTGGGAGTCCATTTAA | 693 | 51.37 | MEPFFNYIQASDAKETIICSSSSVATSHGNGHISDNTKQRTSEEEDKSHHNMFRGVRKRNWGKWVSEIREPRKKTRIWLGTYPTAEMAARAHDAAALAIKGHSAFLNFPELARFLPRPLSKSHKDIQAAAAQAAATTFSEGNNREGEGREAAENMETLFSGSDGGERAEDSTNSPSTAASDETLFDLPDLFVGSSDLKDGFLCHSSLWQFCAAADHSGFRLEEPSFWESI | 230 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 7822336 | 7823028 | - | CmoCh06G009950.1 | Cmo06g00995 | 384557 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo06g00995 | 230 | MobiDBLite | consensus disorder prediction | 24 | 50 | - | - | |
Cmo06g00995 | 230 | MobiDBLite | consensus disorder prediction | 159 | 181 | - | - | |
Cmo06g00995 | 230 | ProSiteProfiles | AP2/ERF domain profile. | 52 | 109 | IPR001471 | GO:0003700|GO:0006355 | |
Cmo06g00995 | 230 | Pfam | AP2 domain | 53 | 102 | IPR001471 | GO:0003700|GO:0006355 | |
Cmo06g00995 | 230 | MobiDBLite | consensus disorder prediction | 166 | 181 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo06g00995 | Cmo-Chr6:7822336 | Cmo12g00206 | Cmo-Chr12:1361052 | 8.58E-43 | dispersed | |
Cmo14g02216 | Cmo-Chr14:15740659 | Cmo06g00995 | Cmo-Chr6:7822336 | 8.40E-96 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
9992 | PF00847 | AP2 | 1.60E-14 | CL0081 | Cmo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo06g00995 | - | - | cmos:111449118 | 451.825 |