Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo06g00995 ATGGAACCATTTTTCAATTACATTCAAGCATCTGATGCGAAAGAAACCATCATTTGCAGCTCTTCCTCTGTCGCAACAAGCCATGGAAATGGACACATCTCTGACAACACAAAACAGAGGACCTCTGAGGAAGAAGATAAGAGCCACCATAATATGTTCAGAGGAGTTCGTAAACGAAACTGGGGCAAATGGGTTTCCGAGATTCGTGAGCCAAGGAAGAAGACCAGGATTTGGCTTGGAACTTACCCAACCGCCGAAATGGCAGCGCGAGCCCACGACGCCGCCGCTCTGGCCATAAAGGGTCACTCTGCATTTCTCAATTTCCCTGAATTGGCTCGGTTCCTTCCTCGCCCACTCTCCAAGTCCCATAAGGACATTCAGGCCGCGGCGGCGCAGGCGGCTGCCACCACATTTTCGGAGGGAAACAACCGTGAGGGTGAAGGAAGGGAAGCGGCGGAGAACATGGAGACTCTGTTTTCTGGTAGCGACGGCGGAGAAAGAGCAGAGGACTCCACGAACTCCCCGTCGACGGCCGCTAGTGATGAGACATTGTTCGATTTGCCTGATCTGTTCGTCGGAAGTTCTGATTTGAAAGATGGGTTTCTTTGTCATTCTTCGTTATGGCAGTTTTGTGCGGCGGCCGATCATTCTGGTTTCCGGCTGGAAGAGCCTTCGTTTTGGGAGTCCATTTAA 693 51.37 MEPFFNYIQASDAKETIICSSSSVATSHGNGHISDNTKQRTSEEEDKSHHNMFRGVRKRNWGKWVSEIREPRKKTRIWLGTYPTAEMAARAHDAAALAIKGHSAFLNFPELARFLPRPLSKSHKDIQAAAAQAAATTFSEGNNREGEGREAAENMETLFSGSDGGERAEDSTNSPSTAASDETLFDLPDLFVGSSDLKDGFLCHSSLWQFCAAADHSGFRLEEPSFWESI 230
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 7822336 7823028 - CmoCh06G009950.1 Cmo06g00995 384557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo06g00995 230 MobiDBLite consensus disorder prediction 24 50 - -
Cmo06g00995 230 MobiDBLite consensus disorder prediction 159 181 - -
Cmo06g00995 230 ProSiteProfiles AP2/ERF domain profile. 52 109 IPR001471 GO:0003700|GO:0006355
Cmo06g00995 230 Pfam AP2 domain 53 102 IPR001471 GO:0003700|GO:0006355
Cmo06g00995 230 MobiDBLite consensus disorder prediction 166 181 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo06g00995 Cmo-Chr6:7822336 Cmo12g00206 Cmo-Chr12:1361052 8.58E-43 dispersed
Cmo14g02216 Cmo-Chr14:15740659 Cmo06g00995 Cmo-Chr6:7822336 8.40E-96 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
9992 PF00847 AP2 1.60E-14 CL0081 Cmo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo06g00995 - - cmos:111449118 451.825