Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo06g01120 ATGAGGCCATCGACCAACGAAGGGCCATTTCGAAATTTGGAATATGTGGGTACTGGTGATGGAGGATCCAGTTCTGAGCATACCGATGGTTTAGGGTCAGCTGGTTCCAGAGAAGCTGATGGAGAAGCAGAAGCTGTAGAAACGGATGCACTGACTGTGGATGAGCTTAGAGAATTGCTGCAAAAGGCTATGACAGAATTGGAAGTTGCGAGACTTAACAGTACCATGTTTGAGGAAAAAGCCCAAAAAATATCAGAAGCAGCGATAGCTTTGCAAGATGAAGCAGCCCATGCTTGGAATGATGTGAATTCTGCTCTTGATTCTGTACAACAGGTCGTGAATGAAGAATATGCTGCCAAAGAAGCTGTTCAAAAAGCAACCATGGCACTTTCATTAGCAGAAGCAAGGCTTCAGGTGGCAATAGAGTCATTGGAGCTGGCAAAAGGAAACGATTCTCCTGAAACATCAACAGAAAGTGAGGGGGAGATTGATGGCAAGGAAAAGCAAGAAGTGTTGTTAGTTGCTCAGGAGGACATCAAAGAATGCTGTGCTAGTTTGGAAACTTGTGATGCGGAATTGAAGCGCTTACAGAGTAAAAAGGAAGAGTTACAGAAGGAAGTGGACAGGCTGACTGAGTTAGCTGAAAAAGAACAGTTGATTGCGTTGAAAGCTGAAGAAGAAGTGGCAAATATAATGCTTTTGGCTGAGCAAGCTGTTGCTTTTGAACTTGAGGCTGCCCAAAGGGTCAGTGATGCTGAAATAGTTTTACAGAGAGTGGAGAAATCTATATCAAATTCTTTTGTTGACACTTCGGAAACCACACAGGGGTCAAATATTATTGAAGAAGTTGTTAACGAGAACAATAAGGCAGTTCTCGAAATTTCTGGTGATATTGCTGTTGAAATGGATAGAGATTTGCCACTTAGTGGTGATTCCTTAGTTATCAAATCTCTTCCAGGTAGCTTTTCAGATTCTGAAGACTCTGATCAACCATATGACTTAAGTGATAGTGAGAATGGAAAATTGAATTCAGATTCCTTAAAGGAGGTAGAATCTGGAGCAGAGAAGTCTATTTTGAGTCAAGCAAAAAAGCAGGAAACACAGAAGGATTTGACCAGAGAAGGCTCATCTTTAAATTCCCCCAAGGCTTTATTGAAAAAATCTTCTCGCTTTTTCTCAGCATCATTCTTTTCCTTTTCGGCTGATGGGGAAGAGTTCACTCCAGCATTAGTCTTCGAGGGTCTCCTGGATACCACGAAAAAGCAATTGCCAAAGCTTATTGTTGGAGTAGTACTGTTAGGAGCAGGTTTAGCAAGCGTATTTCATCTTCCTGATGAAGGTATTGCACCAGTATTCTCCTTCCCCAGGAATCTTAGAAAGAAGAGATTTTTGCGTCCGTTATCAGTTGAGAGGCTAAGCTCCATGAAGAAATATGTTTTTGGGTTAGGATCTGCACAGGTTTTGGTTACAGCTGTGGTGGTTGGGATGATTGCTCATATTGTCTGTGGGCAGCCTGGCCCAGCTGCAATTGTCATTGGAAATGGTTTAGCTTTGTCATCCACTGCTGTTGTCCTTCAGGTGTTGCAAGAGCGAGGCGAGAGCACTTCGCGGCATGGGCGAGCCACATTTTCTGTCTTACTATTTCAGATTGGTTTTCAAGCCATTGCTGAAGCTCTTGGCCTGGCTGCTGTTAAGGCAATAGTTGCCATTTCTACCATTATAGCTGGTGGGCGCCTGGGTATAATGTCTTCTCAACTATCCTCTTTACTGTTTCTTGTTGTGGGAATTTCTATGGCCCTTACACCGTGGCTAGCTGCCGGTGGTCAGTTAATTGCTTCTCATTTTGAGCAACATGATGTTCGGAGCTTATTACCTGTTGAAAGCGAGACTGATGATTTACAAGATCATATCATTCTTTGTGGATTTGGACGAGTTGGTCAGACTAGAGCTGAAATGAAGTTTCTTGTGTTTTGTTCTTTTAGCGATAGAGTGGCTGTTGGACGTGCCCTGGACCTTCCTGTGTATTTTGGAGATGCTGGAAGTCGAGAGGTTCTTCATAAAATTGGTGCTGAAAGGGCATGTGCTGCTGCAATTACACTGGATTCACCGGGTGCAAATTACAGAACCGTTTGGGCTCTAAACAAGTATTTCCCTAATGTTAAGACTTTTGTTCGAGCTCATGATGTTGATCATGGCCTTAATTTGGAGAAGGCTGGGGCAACTGCGGCTAAACTACCCATGTCGGAGATTGCTGCAACGATCAACGAGTTTAGATCCCGACATTTATCCGAGCTTACCGAGCTATCTGAAGCCAGTGGAAGTTCACTTGGGTACGGATTTTCTCGAATCATGAGTAAACCAAAAATTCAAACCTCTGATCCTTCGGATGAGAACCAAGTCATTGAAGGAACACTCACAACATGA 2424 43.28 MRPSTNEGPFRNLEYVGTGDGGSSSEHTDGLGSAGSREADGEAEAVETDALTVDELRELLQKAMTELEVARLNSTMFEEKAQKISEAAIALQDEAAHAWNDVNSALDSVQQVVNEEYAAKEAVQKATMALSLAEARLQVAIESLELAKGNDSPETSTESEGEIDGKEKQEVLLVAQEDIKECCASLETCDAELKRLQSKKEELQKEVDRLTELAEKEQLIALKAEEEVANIMLLAEQAVAFELEAAQRVSDAEIVLQRVEKSISNSFVDTSETTQGSNIIEEVVNENNKAVLEISGDIAVEMDRDLPLSGDSLVIKSLPGSFSDSEDSDQPYDLSDSENGKLNSDSLKEVESGAEKSILSQAKKQETQKDLTREGSSLNSPKALLKKSSRFFSASFFSFSADGEEFTPALVFEGLLDTTKKQLPKLIVGVVLLGAGLASVFHLPDEGIAPVFSFPRNLRKKRFLRPLSVERLSSMKKYVFGLGSAQVLVTAVVVGMIAHIVCGQPGPAAIVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQIGFQAIAEALGLAAVKAIVAISTIIAGGRLGIMSSQLSSLLFLVVGISMALTPWLAAGGQLIASHFEQHDVRSLLPVESETDDLQDHIILCGFGRVGQTRAEMKFLVFCSFSDRVAVGRALDLPVYFGDAGSREVLHKIGAERACAAAITLDSPGANYRTVWALNKYFPNVKTFVRAHDVDHGLNLEKAGATAAKLPMSEIAATINEFRSRHLSELTELSEASGSSLGYGFSRIMSKPKIQTSDPSDENQVIEGTLTT 807
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 8619829 8633892 + CmoCh06G011200.1 Cmo06g01120 384682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo06g01120 807 Coils Coil 53 73 - -
Cmo06g01120 807 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 580 806 - -
Cmo06g01120 807 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 467 579 - -
Cmo06g01120 807 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 8 439 - -
Cmo06g01120 807 ProSiteProfiles RCK N-terminal domain profile. 636 751 IPR003148 GO:0006813
Cmo06g01120 807 MobiDBLite consensus disorder prediction 357 378 - -
Cmo06g01120 807 MobiDBLite consensus disorder prediction 787 807 - -
Cmo06g01120 807 Pfam Sodium/hydrogen exchanger family 468 549 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Cmo06g01120 807 MobiDBLite consensus disorder prediction 148 167 - -
Cmo06g01120 807 Gene3D - 632 771 - -
Cmo06g01120 807 PANTHER K(+) EFFLUX ANTIPORTER 1, CHLOROPLASTIC-RELATED 580 806 - -
Cmo06g01120 807 PANTHER K(+) EFFLUX ANTIPORTER 1, CHLOROPLASTIC-RELATED 467 579 - -
Cmo06g01120 807 PANTHER K(+) EFFLUX ANTIPORTER 1, CHLOROPLASTIC-RELATED 8 439 - -
Cmo06g01120 807 MobiDBLite consensus disorder prediction 1 45 - -
Cmo06g01120 807 Gene3D - 466 619 IPR038770 -
Cmo06g01120 807 Coils Coil 186 227 - -
Cmo06g01120 807 MobiDBLite consensus disorder prediction 319 345 - -
Cmo06g01120 807 Pfam TrkA-N domain 637 743 IPR003148 GO:0006813
Cmo06g01120 807 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 635 754 IPR036291 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo06g01120 Cmo14g02083 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo06g01120 Cmo-Chr6:8619829 Cmo19g00518 Cmo-Chr19:6093556 2.59E-07 dispersed
Cmo14g02083 Cmo-Chr14:15133237 Cmo06g01120 Cmo-Chr6:8619829 1.71E-42 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo06g01120 - - cmax:111475036 725.702