Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo06g01150 ATGAAAAAATCTCTGATGAAGGAAGAGAATGGAACTCCAAAGCGGCAATGGTCCTTGCAAGACTTCGATGTAGGAAAGCCCCTTGGCAAAGGAAAATTCGGCAGAGTCTATCTAGCAAGAGAAGTCAAGGAGCTCCGATTTGATTTTCAGAGCAAGTATATAGTGGCACTGAAGGTAATTTTCAAGGAGCAGATGGAGAAGTACAGGATTCATCATCAGTTGAGGAGAGAGATGGAGATCCAAACCAGTCTTCGGCACCCCAACATCCTGCGCCTCTATGGATGGTTTCATGATGCTGAACGTATTTTCTTGATATTGGAATACGCTCACCGCGGTGAGCTTTATAGGGAGCTTAGGAAAAGTGGTCATCTCAGCGAGCAGCAAGCTGCCACCTACATTTTAAGTCTCACACAAGCATTGGCATACTGCCATGAGAAGCATGTGATTCACAGGGATATTAAGCCAGAAAATTTGCTGCTTGATCATGAGGGCCGGCTGAAAATTGCAGATTTTGGATGGTCTGTACAGTCGAGAAGCAAGAGACATACCATGTGTGGAACTCTGGATTATTTAGCCCCAGAAATGGTGGAGAATAAAGCTCACGACTATGCAGTAGATAATTGGACTTTGGGCATTCTCTGCTATGAGTTCCTTTATGGAGTGCCTCCATTTGAAGCTGAAAGTCAAAGCGACACGTTTAAAAGGATAATGAAGGTCGACTTGAATTTTCCCTCGACCCCTCACGTTTCTTCCGAAGCAAAAGATCTAATTGGCCGGCTCTTGGTGAAGGATTCCTCTAGAAGACTTTCACTTCAGAAGATAGTGGAGCATCCCTGGATAATCATGAATGCAGATCCATCTGGTATTTGCAGTAGCAGCAGCATTCATGATTTAATCAAAATGTTGGGAAAAGTTGTTAGTCGCATTCTCACAGTGATACAGGCTTCCCTAGTGCGATTTCTAGAGCCAACCGATGAACAAACGAGGTTTATCGACGGCGTCACCGGAGCTGATACCTCGTCGATTTCTGCCCGATTCTGCTCTGTTTTCATCGCCATCCTCAGCACGGTCATTGTGGCTTCATCAGCCTTCCAAAGGCTCTCATCTCAATTTCTCAAGGAACTCGACAATACGGCCATGGAGACCAATCCCGCCGCCGCCGTCGTCGACGTTAGCAGTACCCCAAGCGTTCCGCCGGAGAAACGGAACCGTTCTATCTTCAACGTCCCGCCGGACTTATTCGCTTCCTGCAAACTCCTTCGTTCTCCACATTCATACACCTCATCAACCAGCGGCAGCTACAGCTCAAGCGCAGAAAATCCAGTCGATTCGGAGCAGAATTCTAGGGATTTCAAAGAAAGTTCCGTTGCCCAAAGATGGACCTGCAACACATGCAAGGCCGAGTTCGAATCCCTCCTCGACCAGCGTTCGCACTTCAAATCCGACCTCCACCGGTTCAATGTGAAGCTAAGCATTGCTGGCAAGAATATTGTGAAGGAGGATGATTTTGATGAGCTGACATCTGATTCTTTCAGAGACTTTGATGTGTCAAGTATTTCTGGATCAGAGGACGAAACAGAGAAGGAGATTTACCCTCGTAATGAAGGGTCTAAGGTAACAAATGATAGTGTGAACAAGAAGAAGTTGTTCGTTCATCTTCAAACAGGTGAAAGAGTTTCGGTTTGGAAGTGTTTGCTCATAAATGAGTTGGATAGTATTTCGTATGAGGATGATAAAACATCGGTTGGCGGTAATGGTATTCATTCACAAAATCTTAGAGAGAATGAAGTCATAGCGAGATTGAAATATCTAAATCACGAGCCAAGAGATGGCACCCATTTGCGGATAGTGTTGCTTGCAAGTGGTGGGCACTTCGCCGGTTGTGTTTTCGACGGGAACTCGGTTGTGGCTCATAAAACCTTTCACAGATATGTAGTGAGAGCCAAGTCTGGAAAGAAGCAGTCATCAAAAGATGCAAGTGGCAAAACGATCAGTTCTGCCGGGGCTTCTCTTCGTCGTCATAATGAACTCGCGTTGAAGAAGGAAATTCAAGATCTCCTAGCTGCTTGGAAGTCCTATTTTAATGCTTCTTCTTGCGTTTATATTTATGCTCCTTCAAACAACCGGCAATTACTTTTTAATGGGGATAAGCCATATTTTAGCGATCAGCGTTCTGCTGTTCGGAATATTCCTTTGACTGTTCGAAGGCCTACGTTAAAAGAAGCTCGACGTGTTTATGAACAATTGGTGCAAGTAGCATATGAAGTAGAAGATAAGGAAGTATTGTCCACCAGTGGGCACAATTCACCATCAAGTGTAGTTACAACAGACAATGGCACCCAAGATATTGGTGAACCGAAAGTTATTGGAGACTTGGAAAAGGATGCTTGTACACATCTTGAAGAACCTGTTGAACATCCAATAACTAGAGAGAGTGAAAGTGAAAGTACTTGTATAACTACACCTCTGCATGAAGCATCACAGACTGGAAATGCAGATAAGGTTTTGGAACTCCTTGAACAGGGTCTTGATCCTTGCGCCAAAGACGAACGAGGACGGACTCCTTACATGCTAGCAACTGAAAAGGAAGTCCGAAATAGCTTCAGAAGGTTCATGGCTTCAAACCTTGATAAGTGGGATTGGAATGCTGCTAAAGTTCCGAGCGCGCTAACCAAGGAAATGGAGGAATCACAAGCTGCTAAGCAGGCAGAAAAAGATGCCAAGCGAAAGGCACGAGCGAAGGAATTGAAGAAGTTAAAGAAAGAAAAGGCCAAGAAAGCACAGGCCGAGGCCGAGGCTGCCGAATCTCAAAAAGCTGCGAAGGCGGAACACGGCAGAGGAATCGGCTCTATTTTGAATACTCGAGCTGAATCAACCAGTGGAAAACTGATTACCAAAGAGATGGTACAGGCTGCCGAGCGTGAAAAGAGAGCAGCAGCTGCCGAGAGGAGAATCGCAGCCATGGCTGCAGCTGCAGCCACCAATGGTTCCTCGTCGACTATTCCAAACAGCTCACAGACTAAAACCGGGTTAGCCGGGGACATCAACTGTTCCTGTTGCGGTACGTCGCTAGCTGGTAAGGTTCCTTTCCACCGGTACAACTATAAATATTGTAGCTCAACATGCATGCATGTACACAAAGAGGTCCTTGAAGAAAACTAG 3162 45.57 MKKSLMKEENGTPKRQWSLQDFDVGKPLGKGKFGRVYLAREVKELRFDFQSKYIVALKVIFKEQMEKYRIHHQLRREMEIQTSLRHPNILRLYGWFHDAERIFLILEYAHRGELYRELRKSGHLSEQQAATYILSLTQALAYCHEKHVIHRDIKPENLLLDHEGRLKIADFGWSVQSRSKRHTMCGTLDYLAPEMVENKAHDYAVDNWTLGILCYEFLYGVPPFEAESQSDTFKRIMKVDLNFPSTPHVSSEAKDLIGRLLVKDSSRRLSLQKIVEHPWIIMNADPSGICSSSSIHDLIKMLGKVVSRILTVIQASLVRFLEPTDEQTRFIDGVTGADTSSISARFCSVFIAILSTVIVASSAFQRLSSQFLKELDNTAMETNPAAAVVDVSSTPSVPPEKRNRSIFNVPPDLFASCKLLRSPHSYTSSTSGSYSSSAENPVDSEQNSRDFKESSVAQRWTCNTCKAEFESLLDQRSHFKSDLHRFNVKLSIAGKNIVKEDDFDELTSDSFRDFDVSSISGSEDETEKEIYPRNEGSKVTNDSVNKKKLFVHLQTGERVSVWKCLLINELDSISYEDDKTSVGGNGIHSQNLRENEVIARLKYLNHEPRDGTHLRIVLLASGGHFAGCVFDGNSVVAHKTFHRYVVRAKSGKKQSSKDASGKTISSAGASLRRHNELALKKEIQDLLAAWKSYFNASSCVYIYAPSNNRQLLFNGDKPYFSDQRSAVRNIPLTVRRPTLKEARRVYEQLVQVAYEVEDKEVLSTSGHNSPSSVVTTDNGTQDIGEPKVIGDLEKDACTHLEEPVEHPITRESESESTCITTPLHEASQTGNADKVLELLEQGLDPCAKDERGRTPYMLATEKEVRNSFRRFMASNLDKWDWNAAKVPSALTKEMEESQAAKQAEKDAKRKARAKELKKLKKEKAKKAQAEAEAAESQKAAKAEHGRGIGSILNTRAESTSGKLITKEMVQAAEREKRAAAAERRIAAMAAAAATNGSSSTIPNSSQTKTGLAGDINCSCCGTSLAGKVPFHRYNYKYCSSTCMHVHKEVLEEN 1053
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 8812151 8820940 + CmoCh06G011500.1 Cmo06g01150 384712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo06g01150 1053 MobiDBLite consensus disorder prediction 897 911 - -
Cmo06g01150 1053 MobiDBLite consensus disorder prediction 763 782 - -
Cmo06g01150 1053 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Cmo06g01150 1053 SUPERFAMILY Protein kinase-like (PK-like) 15 285 IPR011009 -
Cmo06g01150 1053 ProSitePatterns Zinc finger C2H2 type domain signature. 462 484 IPR013087 -
Cmo06g01150 1053 ProSiteProfiles Ankyrin repeat profile. 821 850 IPR002110 GO:0005515
Cmo06g01150 1053 Gene3D - 813 934 IPR036770 -
Cmo06g01150 1053 MobiDBLite consensus disorder prediction 517 538 - -
Cmo06g01150 1053 Gene3D Phosphorylase Kinase; domain 1 10 112 - -
Cmo06g01150 1053 Pfam Vms1-associating treble clef domain 1015 1048 IPR041540 -
Cmo06g01150 1053 Pfam Protein kinase domain 23 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo06g01150 1053 Coils Coil 894 944 - -
Cmo06g01150 1053 Gene3D Transferase(Phosphotransferase) domain 1 113 301 - -
Cmo06g01150 1053 ProSiteProfiles Protein kinase domain profile. 22 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo06g01150 1053 SUPERFAMILY Ankyrin repeat 821 873 IPR036770 -
Cmo06g01150 1053 MobiDBLite consensus disorder prediction 426 450 - -
Cmo06g01150 1053 MobiDBLite consensus disorder prediction 518 535 - -
Cmo06g01150 1053 MobiDBLite consensus disorder prediction 761 784 - -
Cmo06g01150 1053 CDD STKc_Aurora 21 280 - -
Cmo06g01150 1053 PANTHER ANKYRIN REPEAT AND ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 400 1049 - -
Cmo06g01150 1053 Pfam Bacteroidetes VLRF1 release factor 616 754 IPR041175 -
Cmo06g01150 1053 ProSitePatterns Protein kinases ATP-binding region signature. 28 58 IPR017441 GO:0005524
Cmo06g01150 1053 SMART serkin_6 22 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo06g01150 1053 MobiDBLite consensus disorder prediction 892 951 - -
Cmo06g01150 1053 MobiDBLite consensus disorder prediction 922 942 - -
Cmo06g01150 1053 MobiDBLite consensus disorder prediction 426 444 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g01498 Cmo-Chr1:11583006 Cmo06g01150 Cmo-Chr6:8812151 6.92E-130 dispersed
Cmo06g01150 Cmo-Chr6:8812151 Cmo03g01419 Cmo-Chr3:10261849 3.12E-51 dispersed
Cmo06g01150 Cmo-Chr6:8812151 Cmo09g00607 Cmo-Chr9:3017440 1.27E-130 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74426 PF00069 Pkinase 8.70E-71 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo06g01150 K26089 - csv:101216211 983.786