Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo06g01151 ATGTCTGTTACTTTGCACACAAATCTCGGCGACATCAAGTGCGAGATTTTTTGTGATGAAGTCCCGAAATCTGCCGAGAACTTTTTGGCACTATGTGCTAGTGGCTACTATGATGGAACCATATTCCACCGAAACATCAAAGGTTTTATGATACAAGGTGGAGATCCAACAGGCACGGGAAAAGGAGGAACCAGCATATGGGGCAAAAAGTTCAATGACGAGATAAGAGAGTCGCTCAAGCACAATGCAAGAGGGATATTATCAATGGCTAATAGTGGAGCAAATACGAATGGAAGCCAATTTTTTATAACTTACGCAAAGCAGCCACATCTGAATGGATTATACACTGTGTTCGGCAGAGTGATTCATGGGTTTGAAGTACTTGATATCATGGAAAAGACACAAACTGGGTCGGGAGATCGTCCTCTCGCCGAGATCAGGCTCAATCGGGTAACGATACATGCTAATCCTCTTGCAGAATTAGAAGTAAACCTTACAAAACTAACAGAGAACGGGCTTGCAGAGAAGTGGAGGGTGAGATCCAAGAAGTGGTTCAATCATTGCTTCATTGAAACTCATATTCGGAAGCATAATAATACCCAAAGAGCAGTGGGAGGTGAGGTGGCACCTAATCCTCTTGGATTGGCTTTCCTCGTTGTCACAGTTCTGAATTGTTCGTCATCTTTGCCTCTTTGCCATCATGATTCCTACTGTAATCATTGCGATGAAAAGCCTCTCTTTCTCTCTCTTTCTATTCCGATTTCTTTTTTGTTCTTCTCTCTTCTATTTATACTCTCAATTCCATTGCTCTAA 813 42.19 MSVTLHTNLGDIKCEIFCDEVPKSAENFLALCASGYYDGTIFHRNIKGFMIQGGDPTGTGKGGTSIWGKKFNDEIRESLKHNARGILSMANSGANTNGSQFFITYAKQPHLNGLYTVFGRVIHGFEVLDIMEKTQTGSGDRPLAEIRLNRVTIHANPLAELEVNLTKLTENGLAEKWRVRSKKWFNHCFIETHIRKHNNTQRAVGGEVAPNPLGLAFLVVTVLNCSSSLPLCHHDSYCNHCDEKPLFLSLSIPISFLFFSLLFILSIPLL 270
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
6 8822123 8830545 + CmoCh06G011510.1 Cmo06g01151 384713
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cmo06g01151 270 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 6 153 IPR002130 GO:0000413|GO:0003755
Cmo06g01151 270 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 3 152 IPR002130 GO:0000413|GO:0003755
Cmo06g01151 270 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 2 160 IPR044666 -
Cmo06g01151 270 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-LIKE 3 2 160 - -
Cmo06g01151 270 Gene3D - 1 166 IPR029000 -
Cmo06g01151 270 CDD Cyclophilin_PPIL3_like 1 153 - -
Cmo06g01151 270 SUPERFAMILY Cyclophilin-like 1 167 IPR029000 -
Cmo06g01151 270 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 37 54 IPR020892 GO:0003755|GO:0006457
Cmo06g01151 270 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 100 112 IPR002130 GO:0000413|GO:0003755
Cmo06g01151 270 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 16 31 IPR002130 GO:0000413|GO:0003755
Cmo06g01151 270 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 42 54 IPR002130 GO:0000413|GO:0003755
Cmo06g01151 270 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 85 100 IPR002130 GO:0000413|GO:0003755
Cmo06g01151 270 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 113 128 IPR002130 GO:0000413|GO:0003755
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo03g00955 Cmo-Chr3:7176631 Cmo06g01151 Cmo-Chr6:8822123 1.88E-56 dispersed
Cmo06g01151 Cmo-Chr6:8822123 Cmo07g00660 Cmo-Chr7:2969047 1.04E-56 dispersed
Cmo12g00787 Cmo-Chr12:6406377 Cmo06g01151 Cmo-Chr6:8822123 2.13E-48 transposed
Cmo14g02050 Cmo-Chr14:14980576 Cmo06g01151 Cmo-Chr6:8822123 3.05E-115 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo06g01151 K12734 - csv:101211474 321.242