Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo06g01155 ATGGATCGAGCCGCCGCCGCTCACGGCCGTCATCTTCCGCCGCCGTTCATTTCAAGAGACCTTCAACTCAATCCCCACCACCATTTCCTCCACCAAAACCCCGACCAACACAACGGAAATGATATCTCTGACGGCGGCGCCGCCGTGGAGCTCAAGGAGTTAAGCGGCGGCGAGGGCTCGAGACGGCCACGAGGACGCCCGGCTGGGTCGAAGAACAAGCCGAAGCCGCCGATGATAATCACACGCGACAGCGCTAATGCACTACGGTGCCACGTCATTGAAATCGCCAACGCCAACGACGTGATCGAAACCCTAACGATTTTCGCACGTCAGCGCCAACGTGGCATTTGCATTCTGACCGCCGCCGGAGCGGTCACTAACGTCACACTCAAACAGCCGGCTGCCTCCGCCACCGGTGCGGTGATCGCTCTGCCGGGGAGATTTGAGATTCTTTCGCTGTCGGGGTCGTTTCTGCCGCCGCCTGCGCCACCAGTAGCGTCGAGGCTGACCGTGTATTTATCGGGCAGGCAGGGGCAGGTTATAGGAGGAAGTGTGGTGGGACCACTTTTGAGTTCGGGACCGGTGGTGATTACTGCGGCTTCGTTTGGAAACGCGGCGTACGAGAGGCTGCCGTTGGAGGACGATGAAATGGCGGTGGAGACAGCGCCGGAGGCTGGAAGTAGTCCGGTTAAGTCGCCGGGAACTGCCGTGCAACATCCACAATTTTCGCCGGAATTTCATGGAATGGCGCCAAATCTAATGAATACCTGTCAATTGCCGACGGCGCCCTACTGGGGCACAGGTCGTACTCCGCCATTTTAG 822 59.12 MDRAAAAHGRHLPPPFISRDLQLNPHHHFLHQNPDQHNGNDISDGGAAVELKELSGGEGSRRPRGRPAGSKNKPKPPMIITRDSANALRCHVIEIANANDVIETLTIFARQRQRGICILTAAGAVTNVTLKQPAASATGAVIALPGRFEILSLSGSFLPPPAPPVASRLTVYLSGRQGQVIGGSVVGPLLSSGPVVITAASFGNAAYERLPLEDDEMAVETAPEAGSSPVKSPGTAVQHPQFSPEFHGMAPNLMNTCQLPTAPYWGTGRTPPF 273
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 8855557 8856378 - CmoCh06G011550.1 Cmo06g01155 384717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo06g01155 273 CDD DUF296 89 202 IPR005175 -
Cmo06g01155 273 ProSiteProfiles PPC domain profile profile. 85 225 IPR005175 -
Cmo06g01155 273 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 52 273 IPR014476 GO:0003680
Cmo06g01155 273 SUPERFAMILY AF0104/ALDC/Ptd012-like 85 218 - -
Cmo06g01155 273 MobiDBLite consensus disorder prediction 1 21 - -
Cmo06g01155 273 Pfam Plants and Prokaryotes Conserved (PCC) domain 89 203 IPR005175 -
Cmo06g01155 273 MobiDBLite consensus disorder prediction 218 249 - -
Cmo06g01155 273 MobiDBLite consensus disorder prediction 54 78 - -
Cmo06g01155 273 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 18 52 273 - -
Cmo06g01155 273 Gene3D - 88 222 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo06g01155 Cmo15g01236 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g03067 Cmo-Chr4:21427943 Cmo06g01155 Cmo-Chr6:8855557 2.40E-55 dispersed
Cmo06g01155 Cmo-Chr6:8855557 Cmo14g02016 Cmo-Chr14:14758803 1.05E-63 dispersed
Cmo14g01833 Cmo-Chr14:13926425 Cmo06g01155 Cmo-Chr6:8855557 1.79E-68 dispersed
Cmo17g00172 Cmo-Chr17:1007279 Cmo06g01155 Cmo-Chr6:8855557 1.45E-61 dispersed
Cmo09g00019 Cmo-Chr9:120401 Cmo06g01155 Cmo-Chr6:8855557 3.11E-66 transposed
Cmo15g01236 Cmo-Chr15:8513916 Cmo06g01155 Cmo-Chr6:8855557 6.57E-88 wgd
Cmo17g00030 Cmo-Chr17:135628 Cmo06g01155 Cmo-Chr6:8855557 1.56E-95 wgd
Cmo02g01554 Cmo-Chr2:9006756 Cmo06g01155 Cmo-Chr6:8855557 1.90E-91 wgd
Cmo06g01155 Cmo-Chr6:8855557 Cmo08g00918 Cmo-Chr8:5986572 3.76E-80 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo06g01155 - - csv:101212439 425.246