Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo06g01161 | ATGGACTTCGAAGCTCAGGCTCAGAGCTCGGACGGTTCGTCGACGTCTTCAAAGCTGGTTCTTTACTCTTTCTGGCAGAGCTCCTGCTCGTGGCGTGTTCGCTTTGCGTTGAATCTCAAAGGGCTTTCTTACGAGTACAGAGCAGTGAACCTTGGGAGAGGAGAGCAATTAAGTCCAGATTTTGAGCGCCTAAATCCTCTCAAGTATGTTCCTGTATTAGTAGATGGTGCTGTGGTAGTTTCAGACTCTTTCGCGATTTTACTGTATTTGGAAGAGAAATATCCACAGAAGGCGCTGCTGCCTGCTGATCTTCATTTAAAATCTCTGAATCTGCAAGTGGCAAGTATTGTCAGCTCAAGCATACAGCCTCTTATTATGTTGGGATTGCTGAAAACTATCGAGGAAAAATTTGGTCCAGAAGAGCAACTACCATGGGCTCAGACTAATATAGAAAAGGGTTTCAATGCTCTAGAGAAACTGCTGAAGAATTTTTCTGCCCGATATGCGCTGGGAGAAGAAGTATATATGGCTGATGTATTTTTGGCTCCCCAAGTTTCAGTTGCTTTTGGGAGGTTCAACATTGACTCGTCCAAGTTCCCTACTTTAGCAAGGATTTATGAATCTTACAAGATGTTACCAGAATTCCAAGCCTCCTCACCAGAAAGGCAGCCCGACGCCCTTCACTAG | 687 | 44.83 | MDFEAQAQSSDGSSTSSKLVLYSFWQSSCSWRVRFALNLKGLSYEYRAVNLGRGEQLSPDFERLNPLKYVPVLVDGAVVVSDSFAILLYLEEKYPQKALLPADLHLKSLNLQVASIVSSSIQPLIMLGLLKTIEEKFGPEEQLPWAQTNIEKGFNALEKLLKNFSARYALGEEVYMADVFLAPQVSVAFGRFNIDSSKFPTLARIYESYKMLPEFQASSPERQPDALH | 228 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 8901168 | 8907571 | + | CmoCh06G011610.1 | Cmo06g01161 | 384723 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo06g01161 | 228 | SUPERFAMILY | GST C-terminal domain-like | 99 | 226 | IPR036282 | - | |
Cmo06g01161 | 228 | Pfam | Glutathione S-transferase, N-terminal domain | 21 | 97 | IPR004045 | - | |
Cmo06g01161 | 228 | PANTHER | GLUTATHIONE S-TRANSFERASE 2-LIKE ISOFORM X1 | 10 | 227 | - | - | |
Cmo06g01161 | 228 | SUPERFAMILY | Thioredoxin-like | 17 | 101 | IPR036249 | - | |
Cmo06g01161 | 228 | Gene3D | Glutaredoxin | 21 | 97 | - | - | |
Cmo06g01161 | 228 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 103 | 228 | IPR010987 | - | |
Cmo06g01161 | 228 | Gene3D | - | 100 | 228 | - | - | |
Cmo06g01161 | 228 | TIGRFAM | maiA: maleylacetoacetate isomerase | 21 | 226 | IPR005955 | GO:0003824|GO:0005737|GO:0009072 | |
Cmo06g01161 | 228 | CDD | GST_C_Zeta | 104 | 223 | IPR034330 | - | |
Cmo06g01161 | 228 | PANTHER | MALEYLACETOACETATE ISOMERASE | 10 | 227 | - | - | |
Cmo06g01161 | 228 | SFLD | Glutathione Transferase (cytosolic) | 19 | 208 | IPR040079 | - | |
Cmo06g01161 | 228 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 17 | 98 | IPR004045 | - | |
Cmo06g01161 | 228 | Pfam | Glutathione S-transferase, C-terminal domain | 142 | 216 | IPR004046 | - | |
Cmo06g01161 | 228 | SFLD | Main (cytGST) | 19 | 208 | - | - | |
Cmo06g01161 | 228 | CDD | GST_N_Zeta | 19 | 91 | IPR034333 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo02g00645 | Cmo-Chr2:4025129 | Cmo06g01161 | Cmo-Chr6:8901168 | 3.21E-82 | dispersed | |
Cmo02g00647 | Cmo-Chr2:4034616 | Cmo06g01161 | Cmo-Chr6:8901168 | 1.42E-91 | dispersed | |
Cmo06g01161 | Cmo-Chr6:8901168 | Cmo03g00394 | Cmo-Chr3:4801084 | 1.42E-14 | dispersed | |
Cmo14g02038 | Cmo-Chr14:14905019 | Cmo06g01161 | Cmo-Chr6:8901168 | 1.12E-25 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo06g01161 | K01800 | - | csv:101213403 | 364.77 |