Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo06g01161 ATGGACTTCGAAGCTCAGGCTCAGAGCTCGGACGGTTCGTCGACGTCTTCAAAGCTGGTTCTTTACTCTTTCTGGCAGAGCTCCTGCTCGTGGCGTGTTCGCTTTGCGTTGAATCTCAAAGGGCTTTCTTACGAGTACAGAGCAGTGAACCTTGGGAGAGGAGAGCAATTAAGTCCAGATTTTGAGCGCCTAAATCCTCTCAAGTATGTTCCTGTATTAGTAGATGGTGCTGTGGTAGTTTCAGACTCTTTCGCGATTTTACTGTATTTGGAAGAGAAATATCCACAGAAGGCGCTGCTGCCTGCTGATCTTCATTTAAAATCTCTGAATCTGCAAGTGGCAAGTATTGTCAGCTCAAGCATACAGCCTCTTATTATGTTGGGATTGCTGAAAACTATCGAGGAAAAATTTGGTCCAGAAGAGCAACTACCATGGGCTCAGACTAATATAGAAAAGGGTTTCAATGCTCTAGAGAAACTGCTGAAGAATTTTTCTGCCCGATATGCGCTGGGAGAAGAAGTATATATGGCTGATGTATTTTTGGCTCCCCAAGTTTCAGTTGCTTTTGGGAGGTTCAACATTGACTCGTCCAAGTTCCCTACTTTAGCAAGGATTTATGAATCTTACAAGATGTTACCAGAATTCCAAGCCTCCTCACCAGAAAGGCAGCCCGACGCCCTTCACTAG 687 44.83 MDFEAQAQSSDGSSTSSKLVLYSFWQSSCSWRVRFALNLKGLSYEYRAVNLGRGEQLSPDFERLNPLKYVPVLVDGAVVVSDSFAILLYLEEKYPQKALLPADLHLKSLNLQVASIVSSSIQPLIMLGLLKTIEEKFGPEEQLPWAQTNIEKGFNALEKLLKNFSARYALGEEVYMADVFLAPQVSVAFGRFNIDSSKFPTLARIYESYKMLPEFQASSPERQPDALH 228
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 8901168 8907571 + CmoCh06G011610.1 Cmo06g01161 384723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo06g01161 228 SUPERFAMILY GST C-terminal domain-like 99 226 IPR036282 -
Cmo06g01161 228 Pfam Glutathione S-transferase, N-terminal domain 21 97 IPR004045 -
Cmo06g01161 228 PANTHER GLUTATHIONE S-TRANSFERASE 2-LIKE ISOFORM X1 10 227 - -
Cmo06g01161 228 SUPERFAMILY Thioredoxin-like 17 101 IPR036249 -
Cmo06g01161 228 Gene3D Glutaredoxin 21 97 - -
Cmo06g01161 228 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 103 228 IPR010987 -
Cmo06g01161 228 Gene3D - 100 228 - -
Cmo06g01161 228 TIGRFAM maiA: maleylacetoacetate isomerase 21 226 IPR005955 GO:0003824|GO:0005737|GO:0009072
Cmo06g01161 228 CDD GST_C_Zeta 104 223 IPR034330 -
Cmo06g01161 228 PANTHER MALEYLACETOACETATE ISOMERASE 10 227 - -
Cmo06g01161 228 SFLD Glutathione Transferase (cytosolic) 19 208 IPR040079 -
Cmo06g01161 228 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 17 98 IPR004045 -
Cmo06g01161 228 Pfam Glutathione S-transferase, C-terminal domain 142 216 IPR004046 -
Cmo06g01161 228 SFLD Main (cytGST) 19 208 - -
Cmo06g01161 228 CDD GST_N_Zeta 19 91 IPR034333 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g00645 Cmo-Chr2:4025129 Cmo06g01161 Cmo-Chr6:8901168 3.21E-82 dispersed
Cmo02g00647 Cmo-Chr2:4034616 Cmo06g01161 Cmo-Chr6:8901168 1.42E-91 dispersed
Cmo06g01161 Cmo-Chr6:8901168 Cmo03g00394 Cmo-Chr3:4801084 1.42E-14 dispersed
Cmo14g02038 Cmo-Chr14:14905019 Cmo06g01161 Cmo-Chr6:8901168 1.12E-25 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo06g01161 K01800 - csv:101213403 364.77