Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo06g01183 ATGCTTTCTTCCCGCATTAATCTCCCACCAACCCCACTTTCCACCAACCCCACCTCCCCCTTTCCCCGCTTTTCCCCAAACCTCCTCCCATCCGTCCGATCTAAACCCTCCGATCGCCACCGATTCTCCACCTCCGCCGCCATTAATGGCGTCTCTTCAAAACCCACATCTCTAATTTTCAACCCAATCCCCAAATCGAGCCTATTCTGCAAAAATCCCGTGGACCGATTTAGGGTTTTCCCTTCTAAACCTAACCTCCATGTCCCCGCTGCTGCTGCCGCAGACGGCGGCGATACCACCGCTGATTCCGTCTCCAGCAACAAAACACTTCAACTCGCCGTCGTGTTTGGGCTATGGTATTTCCAGAACATCGTATTCAATATCTACAACAAGAAGGTTCTCAACGTTTTCTCATTTCCATGGCTTCTCGCTTCGTTTCAGCTCTTTACTGGATCGATTTGGATGCTTGTTCTTTGGTCATTGAAGCTTCAACCATGCCCTAAAATTTCAAAGCCGTTCATAATGGCTCTCCTCGGCCCCGCTTTATTCCACACAATCGGCCATATCTCCGCCTGCGTTTCGTTCTCAAAAGTCGCTGTTTCTTTCACTCATGTCATTAAATCGGCCGAACCAGTCTTCTCCGTTCTGTTCTCTTCATTCCTCGGCGATTCATATCCAATCCAGGTCTGGCTCTCGATTCTCCCCATTGTTTTTGGCTGCTCTCTGGCCGCCATTACTGAAGCTACCTTCAATTTCGAAGGTCTTTCAGGCGCCATGATCAGCAACGTAGGGTTTGTGTTAAGAAACATTTACTCAAAAAAGAGCTTGCAGAGCTTCAAGGAGGTTAATGGGTTGAATTTATATGGCTGCATTAGCATAATTTCTTTGTTGTATCTGTTTCCTGTGGCGATTTTCGTTGAAGGGTCGAAATGGGTTCAAGGATATCATCAAGCAATTTCCTCCATTGGTAATGCTTCAACGTTATATCTCTGGGTTTTGATTTCTGGAATCTTTTATCATCTTTATAATCAATCTTCTTATCAAGCTCTTGATGAAATTAGTCCATTGACATTCTCTGTTGGGAATACAATGAAAAGAGTGGTTGTGATTGTAGCTTCTGTGTTGGTGTTTAGAAACCCAATTAGGCCTTTGAATGCTATTGGTTCTGCTCTTGCCATTTTTGGGACTTTTCTGTACTCTCAGGCGACGTCGAAAAAGAGTTCTAAGAAGATTGAGGAAGGAGAAAAGAAGGATTGA 1257 45.03 MLSSRINLPPTPLSTNPTSPFPRFSPNLLPSVRSKPSDRHRFSTSAAINGVSSKPTSLIFNPIPKSSLFCKNPVDRFRVFPSKPNLHVPAAAAADGGDTTADSVSSNKTLQLAVVFGLWYFQNIVFNIYNKKVLNVFSFPWLLASFQLFTGSIWMLVLWSLKLQPCPKISKPFIMALLGPALFHTIGHISACVSFSKVAVSFTHVIKSAEPVFSVLFSSFLGDSYPIQVWLSILPIVFGCSLAAITEATFNFEGLSGAMISNVGFVLRNIYSKKSLQSFKEVNGLNLYGCISIISLLYLFPVAIFVEGSKWVQGYHQAISSIGNASTLYLWVLISGIFYHLYNQSSYQALDEISPLTFSVGNTMKRVVVIVASVLVFRNPIRPLNAIGSALAIFGTFLYSQATSKKSSKKIEEGEKKD 418
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 9021392 9022648 - CmoCh06G011830.1 Cmo06g01183 384745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo06g01183 418 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 110 410 IPR004696 GO:0016021|GO:0022857|GO:0055085
Cmo06g01183 418 Pfam Triose-phosphate Transporter family 110 400 IPR004853 -
Cmo06g01183 418 SUPERFAMILY Multidrug resistance efflux transporter EmrE 294 402 - -
Cmo06g01183 418 MobiDBLite consensus disorder prediction 1 39 - -
Cmo06g01183 418 PANTHER XYLULOSE 5-PHOSPHATE/PHOSPHATE TRANSLOCATOR, CHLOROPLASTIC 79 413 - -
Cmo06g01183 418 PANTHER SOLUTE CARRIER FAMILY 35 79 413 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g02826 Cmo-Chr4:20236593 Cmo06g01183 Cmo-Chr6:9021392 8.34E-73 dispersed
Cmo06g01183 Cmo-Chr6:9021392 Cmo16g00906 Cmo-Chr16:5410802 1.21E-100 dispersed
Cmo06g01183 Cmo-Chr6:9021392 Cmo09g00935 Cmo-Chr9:4905641 3.48E-101 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo06g01183 K15283 - csv:101219051 674.47