Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo06g01186 | ATGGAAGAAGAAGAAGAAGGAGAAGTGAAGCTGTTCAGAACGTGGTCGAGTCCATTCGCTCTGAGAATAGTATGGGCGTTGAAGTTGAAAGGAATAGAATACGACACCGTTTATGAAGATCTGGCCAACAAGAGTTCGTCGCTTTTGGAGTACAATCCGATCCACAAGAAGGTTCCGGTGCTCGTCCATGGCGGAAAGCCGATCGCCGAATCGCTCGTCATCCTTGAATACATCGACGAAATATGGAACCAAAATCCGTTGCTGCCTCAAGATCCTTACCAGAGAGCCGTTGCTCGCTTTTGGGCCAAATTTGGGGACGAGAAGGTTTGGGAGTCAATGAAGAGAGTGTTTATGAACGAAGGGAAGTTGAAAGAGGAAGGGATAGAAGAAGCGAAGGAGAGTTTGAAGCATTTGGAAGAAGAGTTAAAGGCGAGGGGAAAGAGGTTCTTTGGCGGGGAAGTGATAGGGTTTGTGGATATTGCGCTTGGGTGGCTTGCAAACTTACCAAGTGTGTTGGAGGAAGTGATTGGACTTAGCCTCATAACTCAACAAACCTTCCCCCTCTTGTCTAAATGGACTCACGAATTTGCTAATGCCCCAATCATCAATCAACATTGGCCTCCTAAACAACAACTTGTCACCAAGTTCAAAGCTATGCATCAAATTTTCATGAATAAACAAGCATGA | 687 | 45.56 | MEEEEEGEVKLFRTWSSPFALRIVWALKLKGIEYDTVYEDLANKSSSLLEYNPIHKKVPVLVHGGKPIAESLVILEYIDEIWNQNPLLPQDPYQRAVARFWAKFGDEKVWESMKRVFMNEGKLKEEGIEEAKESLKHLEEELKARGKRFFGGEVIGFVDIALGWLANLPSVLEEVIGLSLITQQTFPLLSKWTHEFANAPIINQHWPPKQQLVTKFKAMHQIFMNKQA | 228 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 9033267 | 9035198 | - | CmoCh06G011860.1 | Cmo06g01186 | 384748 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo06g01186 | 228 | Coils | Coil | 121 | 148 | - | - | |
Cmo06g01186 | 228 | CDD | GST_C_Tau | 92 | 219 | IPR045074 | GO:0004364|GO:0006749 | |
Cmo06g01186 | 228 | PANTHER | S-TRANSFERASE, PUTATIVE-RELATED | 7 | 220 | - | - | |
Cmo06g01186 | 228 | Pfam | Glutathione S-transferase, N-terminal domain | 8 | 80 | IPR004045 | - | |
Cmo06g01186 | 228 | SUPERFAMILY | Thioredoxin-like | 9 | 109 | IPR036249 | - | |
Cmo06g01186 | 228 | PANTHER | GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING | 7 | 220 | IPR045073 | - | |
Cmo06g01186 | 228 | CDD | GST_N_Tau | 9 | 82 | - | - | |
Cmo06g01186 | 228 | SUPERFAMILY | GST C-terminal domain-like | 80 | 223 | IPR036282 | - | |
Cmo06g01186 | 228 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 7 | 86 | IPR004045 | - | |
Cmo06g01186 | 228 | SFLD | Main.3: Omega- and Tau-like | 5 | 227 | IPR045073 | - | |
Cmo06g01186 | 228 | SFLD | Main (cytGST) | 5 | 227 | - | - | |
Cmo06g01186 | 228 | Pfam | Glutathione S-transferase, C-terminal domain | 116 | 200 | IPR004046 | - | |
Cmo06g01186 | 228 | Gene3D | Glutaredoxin | 3 | 87 | - | - | |
Cmo06g01186 | 228 | Gene3D | - | 88 | 227 | - | - | |
Cmo06g01186 | 228 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 91 | 216 | IPR010987 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo06g01186 | Cmo-Chr6:9033267 | Cmo14g01905 | Cmo-Chr14:14199702 | 2.65E-69 | dispersed | |
Cmo14g02022 | Cmo-Chr14:14807738 | Cmo06g01186 | Cmo-Chr6:9033267 | 5.82E-25 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo06g01186 | K00799 | - | csv:101219529 | 363.229 |