Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo06g01186 ATGGAAGAAGAAGAAGAAGGAGAAGTGAAGCTGTTCAGAACGTGGTCGAGTCCATTCGCTCTGAGAATAGTATGGGCGTTGAAGTTGAAAGGAATAGAATACGACACCGTTTATGAAGATCTGGCCAACAAGAGTTCGTCGCTTTTGGAGTACAATCCGATCCACAAGAAGGTTCCGGTGCTCGTCCATGGCGGAAAGCCGATCGCCGAATCGCTCGTCATCCTTGAATACATCGACGAAATATGGAACCAAAATCCGTTGCTGCCTCAAGATCCTTACCAGAGAGCCGTTGCTCGCTTTTGGGCCAAATTTGGGGACGAGAAGGTTTGGGAGTCAATGAAGAGAGTGTTTATGAACGAAGGGAAGTTGAAAGAGGAAGGGATAGAAGAAGCGAAGGAGAGTTTGAAGCATTTGGAAGAAGAGTTAAAGGCGAGGGGAAAGAGGTTCTTTGGCGGGGAAGTGATAGGGTTTGTGGATATTGCGCTTGGGTGGCTTGCAAACTTACCAAGTGTGTTGGAGGAAGTGATTGGACTTAGCCTCATAACTCAACAAACCTTCCCCCTCTTGTCTAAATGGACTCACGAATTTGCTAATGCCCCAATCATCAATCAACATTGGCCTCCTAAACAACAACTTGTCACCAAGTTCAAAGCTATGCATCAAATTTTCATGAATAAACAAGCATGA 687 45.56 MEEEEEGEVKLFRTWSSPFALRIVWALKLKGIEYDTVYEDLANKSSSLLEYNPIHKKVPVLVHGGKPIAESLVILEYIDEIWNQNPLLPQDPYQRAVARFWAKFGDEKVWESMKRVFMNEGKLKEEGIEEAKESLKHLEEELKARGKRFFGGEVIGFVDIALGWLANLPSVLEEVIGLSLITQQTFPLLSKWTHEFANAPIINQHWPPKQQLVTKFKAMHQIFMNKQA 228
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 9033267 9035198 - CmoCh06G011860.1 Cmo06g01186 384748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo06g01186 228 Coils Coil 121 148 - -
Cmo06g01186 228 CDD GST_C_Tau 92 219 IPR045074 GO:0004364|GO:0006749
Cmo06g01186 228 PANTHER S-TRANSFERASE, PUTATIVE-RELATED 7 220 - -
Cmo06g01186 228 Pfam Glutathione S-transferase, N-terminal domain 8 80 IPR004045 -
Cmo06g01186 228 SUPERFAMILY Thioredoxin-like 9 109 IPR036249 -
Cmo06g01186 228 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 7 220 IPR045073 -
Cmo06g01186 228 CDD GST_N_Tau 9 82 - -
Cmo06g01186 228 SUPERFAMILY GST C-terminal domain-like 80 223 IPR036282 -
Cmo06g01186 228 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 7 86 IPR004045 -
Cmo06g01186 228 SFLD Main.3: Omega- and Tau-like 5 227 IPR045073 -
Cmo06g01186 228 SFLD Main (cytGST) 5 227 - -
Cmo06g01186 228 Pfam Glutathione S-transferase, C-terminal domain 116 200 IPR004046 -
Cmo06g01186 228 Gene3D Glutaredoxin 3 87 - -
Cmo06g01186 228 Gene3D - 88 227 - -
Cmo06g01186 228 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 216 IPR010987 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo06g01186 Cmo-Chr6:9033267 Cmo14g01905 Cmo-Chr14:14199702 2.65E-69 dispersed
Cmo14g02022 Cmo-Chr14:14807738 Cmo06g01186 Cmo-Chr6:9033267 5.82E-25 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo06g01186 K00799 - csv:101219529 363.229