Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo06g01256 ATGGGTAGCGGAGAAAAGGTCTTCACCTTGAAGGAAGTCGCTGAGCACAACAATCACAAGGACTGTTGGCTCATCATTAGTGGCAAGGTATATGACGTGACCAAATTCTTAGATGACCATCCTGGAGGTGATGATGTTTTGTTATCAGCCACAGGAAAAGATGCAACGGACGATTTTGAAGATGTGGGGCACAGTGACAACGCAAGAGAAATGATGGATCAATACTATGTTGGAGAGATTGATGGTTCGACAATTCCAAAGAAGGTCGCATACACGCCTCCGAAACAGCCTCATTACAATCAGGACAAGACGTCGGAGTTCATCATCAAGCTCCTCCAGTTCCTCGTCCCGCTTGCAATTTTGGGATTGGCAGTTGCCTTACGTTTCTACACGAAACAAGCTTGA 405 45.93 MGSGEKVFTLKEVAEHNNHKDCWLIISGKVYDVTKFLDDHPGGDDVLLSATGKDATDDFEDVGHSDNAREMMDQYYVGEIDGSTIPKKVAYTPPKQPHYNQDKTSEFIIKLLQFLVPLAILGLAVALRFYTKQA 134
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 9487661 9490797 + CmoCh06G012560.1 Cmo06g01256 384818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo06g01256 134 Gene3D - 3 84 IPR036400 -
Cmo06g01256 134 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 6 91 IPR036400 -
Cmo06g01256 134 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Cmo06g01256 134 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Cmo06g01256 134 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Cmo06g01256 134 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Cmo06g01256 134 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Cmo06g01256 134 SMART Cyt_b5_2 8 81 IPR001199 -
Cmo06g01256 134 PANTHER CYTOCHROME B5 1 132 - -
Cmo06g01256 134 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037
Cmo06g01256 134 Pfam Cytochrome b5-like Heme/Steroid binding domain 9 80 IPR001199 -
Cmo06g01256 134 PANTHER CYTOCHROME B5 1 132 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo06g01256 Cmo-Chr6:9487661 Cmo15g01073 Cmo-Chr15:6968038 1.70E-66 dispersed
Cmo05g00477 Cmo-Chr5:2225434 Cmo06g01256 Cmo-Chr6:9487661 6.79E-40 transposed
Cmo14g01941 Cmo-Chr14:14367871 Cmo06g01256 Cmo-Chr6:9487661 9.91E-94 wgd
Cmo17g00112 Cmo-Chr17:595825 Cmo06g01256 Cmo-Chr6:9487661 3.62E-74 wgd
Cmo19g00182 Cmo-Chr19:1180756 Cmo06g01256 Cmo-Chr6:9487661 2.00E-50 wgd
Cmo02g01726 Cmo-Chr2:9856432 Cmo06g01256 Cmo-Chr6:9487661 3.13E-66 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo06g01256 K23490 - csv:101214209 273.092