Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo06g01289 | ATGGTTAATTCGTGTGATGGCGCTTGGGATTCGCTACCTCGACGCTTTGGATCTGTGGCTGATCGAGTTTGTCCCGAAATGGCTGGTCAAGTAAATCTAGCGGTTGGGTGTCTTGTTTGGATTGAGGATCCTGAGGTAGCCTGGATAGATGGGGAAGTAGTGGAAGTTAATGGTCAAGATATCAGAGTACTCTGTTCATCAGGAACTACTGTTGAGGCCAAATCATCAAATGCCTATCCAAAGGATCCTGAATTTCCATCATGTGGTGTGGATGATATGACAAAACTAGCTTATTTACACGAGCCAGGACTGCTACAGAACTTGAAATGTCGTTATGATGTTAATGAAATTTATACCTATACTGGGGGTATACTAATAGCCGTAAATCCTTTTCGAAGACTTCCTCATTTATATGATAATGGCATAATGCAACAATATAAAGGGGCGGATTTAGGTGAGCTGAGCCCGCATCCCTTTGCCATTGCAAATTCTGCATATAGACAGATGATTAATGAGGGTATAAGCCAGTCAATTTTAGTTAGCGGGGAAAGTGGAGCTGGTAAAACGGAGAGTACAAAGATGCTTATGCGCTATCTTGCCCATGTTGGAGGGAGAGATGGAGGGAAGTCTGCAACTGGTGAACGCTCTGTAGAGCAGCAAGTACTAGAGTCCAACCCTGTTCTAGAAGCATTTGGCAATGCAAAGACTGTTAGAAACAATAATTCCAGTCGGTTTGGTAAATTTGTGGAGATCCAATTTGACCGAAGTTGGAGAATTTCTGGAGCTGCTATTAGAACTTATTTATTAGAACGTTCCCGTGTTTGCCAAGTGTCTGATCCTGAGAGGAATTATCATTGCTTTTATATGCTTTGTGCATCAACAGAGGAAGTTGAAAAGTATAAGTTAGGGAATCCAAGAACATTCCATTATCTTAATCAATCTAATTGCTATGAACTTGATGGACTGGACGATTCCAAGGAATATACTTCTACTAGAGAAGCTATGGATGTCGTTGGAATAAGTACAGCTGAGCAGGATGCTATATTTCGAGTGGTAGCTGCAGTACTTCATTTGGGCAATGTTGAATTTGCAAAGGGGAAGGATGCGGATTCCTCTGAACCTAAGGATGACAAAGCTCGGTTCCATCTCAAAATGGCAGCAGAACTATTCATGTGTGATGAGAAGGCTCTTGAAGATTCAATGTGTACTCGTGTGATAGTTACACGTGATGAAACCATAACTAAATGTCTCGATACAGTATCTGCAACTCTTAGTAGGGATGCTTTGGCAAAAATCGTTTTGTGTTTCATTCTTAAATTACTTTTTAATTTAAATTTGTCATTGTTGTTTCTATCATGGACTCTTTTTAAACATTTCCTTCGTGGACTCAGGATTGTTGATAAGATTAATAACTCAATTGGCCAAGATCGTGATTCAAAACACTTAATCGGGGTTCTGGATATCTATGGATTCGAGAGTTTCAAGACAAACAGGTGCTTAACCGGAATTAGCTTTAAATTGGTATCGTGGGAAGGGAGAATGGGAATCATTAAAGGATGGAATGATTTGAAGATGTAA | 1578 | 40.24 | MVNSCDGAWDSLPRRFGSVADRVCPEMAGQVNLAVGCLVWIEDPEVAWIDGEVVEVNGQDIRVLCSSGTTVEAKSSNAYPKDPEFPSCGVDDMTKLAYLHEPGLLQNLKCRYDVNEIYTYTGGILIAVNPFRRLPHLYDNGIMQQYKGADLGELSPHPFAIANSAYRQMINEGISQSILVSGESGAGKTESTKMLMRYLAHVGGRDGGKSATGERSVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDRSWRISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCASTEEVEKYKLGNPRTFHYLNQSNCYELDGLDDSKEYTSTREAMDVVGISTAEQDAIFRVVAAVLHLGNVEFAKGKDADSSEPKDDKARFHLKMAAELFMCDEKALEDSMCTRVIVTRDETITKCLDTVSATLSRDALAKIVLCFILKLLFNLNLSLLFLSWTLFKHFLRGLRIVDKINNSIGQDRDSKHLIGVLDIYGFESFKTNRCLTGISFKLVSWEGRMGIIKGWNDLKM | 525 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 9724770 | 9729766 | - | CmoCh06G012890.1 | Cmo06g01289 | 384851 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo06g01289 | 525 | Gene3D | Kinesin motor domain | 476 | 491 | IPR036961 | - | |
Cmo06g01289 | 525 | Gene3D | - | 282 | 339 | - | - | |
Cmo06g01289 | 525 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 341 | 433 | - | - | |
Cmo06g01289 | 525 | PRINTS | Myosin heavy chain signature | 226 | 253 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cmo06g01289 | 525 | PRINTS | Myosin heavy chain signature | 118 | 137 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cmo06g01289 | 525 | PRINTS | Myosin heavy chain signature | 482 | 510 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cmo06g01289 | 525 | PRINTS | Myosin heavy chain signature | 175 | 200 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cmo06g01289 | 525 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 34 | 83 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
Cmo06g01289 | 525 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 465 | 475 | - | - | |
Cmo06g01289 | 525 | Gene3D | Kinesin motor domain | 91 | 281 | IPR036961 | - | |
Cmo06g01289 | 525 | PANTHER | MYOSIN-14 | 23 | 497 | - | - | |
Cmo06g01289 | 525 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 59 | 497 | IPR027417 | - | |
Cmo06g01289 | 525 | Pfam | Myosin head (motor domain) | 90 | 497 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cmo06g01289 | 525 | Pfam | Myosin N-terminal SH3-like domain | 38 | 76 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
Cmo06g01289 | 525 | PANTHER | MYOSIN | 23 | 497 | - | - | |
Cmo06g01289 | 525 | SMART | MYSc_2a | 82 | 524 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cmo06g01289 | 525 | ProSiteProfiles | Myosin motor domain profile. | 88 | 525 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo06g01289 | Cmo-Chr6:9724770 | Cmo08g00050 | Cmo-Chr8:272375 | 0 | dispersed | |
Cmo06g01289 | Cmo-Chr6:9724770 | Cmo17g01320 | Cmo-Chr17:10337844 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo06g01289 | K10357 | - | cmax:111474800 | 865.914 |