Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo06g01332 ATGGCCGGAGAGCCACTGAAAGTGTTGGACGCGTTGGATGTAGCCAAGACGCAATGGTACCATTTCACGGCCATTGTGATCGCCGGAATGGGCTTTTTCACCGACGCCTATGATCTCTTCTGCGTATCTCTTGTCACCAAATTGCTGGGTCGGATTTATTATCATAAACAGGGCTCTGACAAGCCTGGTGAATTGCCTGGCAATGTCGCCGCCGCCGTTAACGGCGTTGCCTTCTGCGGTACCCTCTCCGGTCAGCTCTTCTTCGGCTGGCTCGGTGACAAAATGGGTCGGAAACGAGTCTACGGCATGACCCTTATGCTTATGGTTATTTGCTCTGTTGCTTCCGGTTTGTCTTTCAGCAGCTCGCCGACGTCGGTGGTTGCCACTCTCTGTTTCTTCCGATTCTGGCTCGGGTTTGGAATCGGCGGCGATTACCCACTTTCCGCCACAATCATGTCGGAATACGCCAATAAAAGAACAAGGGGGGCATTCATCGCCGCCGTGTTTGCGATGCAGGGGTTTGGGATTTTGGCTGGTGGAGTGGTGGCTATAATTGTCTCCGCCGCTTTCGACGCCAAATACCCAGCGCCGTCGTACCAGGAAAATCCCAACGCCTCCACCATCCCACAAGCGGATTACGTATGGCGAATCATTGTAATTTTTGGAGCTTTCCCAGCTCTCCTCACGTATTACTGGCGAATGAAAATGCCGGAAACTGCCCGTTACACCGCCTTGGTGGCTAAAAACGCCAAACAGGCGGCGGCGGACATGTCCAAAGTGCTGCAGGTCGAATTAGAATCCGAACAGGACAAAATCGAGGAAGGCAAATCGAAAAACGAATTTGGGTTGTTCTCAAAAAGCTTTCTTCGCCGGCACGGCCTTCATTTGCTCGGAACCACCTCCACCTGGTTCTTATTGGACATTGCATTCTACAGTCAAAATCTATTCCAAAAGGACATCTTCACCGCCATTGGATGGCTTCCTCCGGCGAAAACAATGAACGCCATTGAAGAAGTTTTCAAAATCGCCAGAGCACAGACGCTCATAGCATTATGCAGCACAGTTCCCGGGTATTGGTTCACAGTGGCATTAATCGACGTAATGGGTCGATTTGCAATTCAATTAATGGGGTTTTTCTTCATGACGGTGTTCATGTTCGCATTGGCAATTCCTTACAACCACTGGACTCTACCAGACCACAGAATTGGGTTCGTAGTGATGTATTCTCTCACGTTTTTCTTCGCGAATTTCGGGCCAAACGCGACGACATTCGTGGTTCCGGCGGAGATTTTCCCAGCGAGGCTTCGATCAACGTGCCATGGAATATCAGCGGCGTCGGGAAAAGCAGGGGCGATCATCGGGGCGTTTGGGTTCCAGGCGGTGGAGAAGGCGTTTGGGGTAAAGAAGACGTTGATAATTCTGGGGGTGGTGAATGCTCTGGGGGCGTTGTTTACATTGTTGGTTCCTGAATCGAAGGGGAAGTCTTTGGAAGAGATGTCGGGGGAAGCGGGAGAAGAGGTTGAAAGGGAAACAGAGGCGAGGGCTGAGTCTCGTAGAACTATGCCTGTTTGA 1572 51.21 MAGEPLKVLDALDVAKTQWYHFTAIVIAGMGFFTDAYDLFCVSLVTKLLGRIYYHKQGSDKPGELPGNVAAAVNGVAFCGTLSGQLFFGWLGDKMGRKRVYGMTLMLMVICSVASGLSFSSSPTSVVATLCFFRFWLGFGIGGDYPLSATIMSEYANKRTRGAFIAAVFAMQGFGILAGGVVAIIVSAAFDAKYPAPSYQENPNASTIPQADYVWRIIVIFGAFPALLTYYWRMKMPETARYTALVAKNAKQAAADMSKVLQVELESEQDKIEEGKSKNEFGLFSKSFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFTAIGWLPPAKTMNAIEEVFKIARAQTLIALCSTVPGYWFTVALIDVMGRFAIQLMGFFFMTVFMFALAIPYNHWTLPDHRIGFVVMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKAGAIIGAFGFQAVEKAFGVKKTLIILGVVNALGALFTLLVPESKGKSLEEMSGEAGEEVERETEARAESRRTMPV 523
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 9921850 9923421 - CmoCh06G013320.1 Cmo06g01332 384894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo06g01332 523 MobiDBLite consensus disorder prediction 496 523 - -
Cmo06g01332 523 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 493 IPR020846 GO:0022857
Cmo06g01332 523 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 4 513 - -
Cmo06g01332 523 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-4-LIKE 4 513 - -
Cmo06g01332 523 Gene3D MFS general substrate transporter like domains 20 517 IPR036259 -
Cmo06g01332 523 Pfam Sugar (and other) transporter 25 500 IPR005828 GO:0016021|GO:0022857|GO:0055085
Cmo06g01332 523 CDD MFS_PhT 25 492 - -
Cmo06g01332 523 TIGRFAM 2A0109: phosphate:H+ symporter 11 502 IPR004738 GO:0005315|GO:0006817|GO:0016021
Cmo06g01332 523 SUPERFAMILY MFS general substrate transporter 11 500 IPR036259 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo06g01332 Cmo17g00165 CCT
Cmo06g01332 Cmo14g01847 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo06g01332 Cmo-Chr6:9921850 Cmo14g01849 Cmo-Chr14:13972822 0 dispersed
Cmo09g00029 Cmo-Chr9:139751 Cmo06g01332 Cmo-Chr6:9921850 0 transposed
Cmo16g00079 Cmo-Chr16:368539 Cmo06g01332 Cmo-Chr6:9921850 0 transposed
Cmo14g01847 Cmo-Chr14:13968135 Cmo06g01332 Cmo-Chr6:9921850 0 wgd
Cmo17g00165 Cmo-Chr17:963739 Cmo06g01332 Cmo-Chr6:9921850 0 wgd
Cmo19g00098 Cmo-Chr19:552994 Cmo06g01332 Cmo-Chr6:9921850 0 wgd
Cmo02g01793 Cmo-Chr2:10195085 Cmo06g01332 Cmo-Chr6:9921850 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo06g01332 K08176 - csv:101209582 889.026