Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmo06g01345 | ATGGGTCTGGCGAATCCTTGGTGGACCACGCAGGTGGGGCTGCCGGGGCTCGACCATCATCACCCGGCGGCGGTCAACTCACCAATCTTCAAACAAAGCGATGAAAACAGCGGCGGAGGAAGCGGAAGCCGAGAGGACGACGATGACGACAACAACCGTGATGAGCCGAAAGAAGGTGCTGTGGAAACCGGAAACCGGAGACCAAGAGGGCGTCCACCTGGATCTAAAAACAAACCAAAACCCCCCATCTTCGTCACACGTGACAGTCCCAACGCCCTTCGGAGCTACGTTCTAGAGGTGGCTGCCGGATCTGACGTGGCGGATTCCATCGCCCAATTCGCTCGGAAGCGCCAGCGTGGCGTCTGTGTCCTCAGTGCAACCGGCTTGGTCGCTAACGTCACGTTACGTCAGCCTACTTCTCCCGGTTCGGTAATGCCACTCCAAGGAAGGTTTGAGATTCTCTCTTTAACCGGCGCGTTTTTACCCGGTCCAGCCCCACCCGGATCCACCGGGCTGACCGTTTACTTGTCCGGCGGTCAGGGGCAGGTTGTCGGCGGGAGCGTTGTTGGGTCGCTTGTGGCGGCCGGTCCTATTATGGTAATTGCTGCTACTTTTTCTAATGCCACTTATGAAAGGTTGCCTCTTGAAGAACCGGAGGATCATGAAATTGGCAGTGGATCCGCCACACACGGCGGCGCTACAAGCCCACCACAGGAAATTAGAGGCGGTGGGCAGATGCCGACAGGGATGCCGGATCCCACTTTGCCGTTGTATAATTTACTGCCCGACATGATGCCCAACGGCGTTCAGCTCGGCCACGACGGGTATGCTTATGTCCGACCGCCGTATTGA | 852 | 57.63 | MGLANPWWTTQVGLPGLDHHHPAAVNSPIFKQSDENSGGGSGSREDDDDDNNRDEPKEGAVETGNRRPRGRPPGSKNKPKPPIFVTRDSPNALRSYVLEVAAGSDVADSIAQFARKRQRGVCVLSATGLVANVTLRQPTSPGSVMPLQGRFEILSLTGAFLPGPAPPGSTGLTVYLSGGQGQVVGGSVVGSLVAAGPIMVIAATFSNATYERLPLEEPEDHEIGSGSATHGGATSPPQEIRGGGQMPTGMPDPTLPLYNLLPDMMPNGVQLGHDGYAYVRPPY | 283 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 9973532 | 9974533 | + | CmoCh06G013450.1 | Cmo06g01345 | 384907 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmo06g01345 | 283 | MobiDBLite | consensus disorder prediction | 1 | 88 | - | - | |
| Cmo06g01345 | 283 | MobiDBLite | consensus disorder prediction | 217 | 255 | - | - | |
| Cmo06g01345 | 283 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 94 | 207 | IPR005175 | - | |
| Cmo06g01345 | 283 | ProSiteProfiles | PPC domain profile profile. | 90 | 231 | IPR005175 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmo04g00202 | Cmo-Chr4:1004403 | Cmo06g01345 | Cmo-Chr6:9973532 | 3.75E-71 | dispersed | |
| Cmo04g01239 | Cmo-Chr4:6293402 | Cmo06g01345 | Cmo-Chr6:9973532 | 6.50E-73 | dispersed | |
| Cmo05g01254 | Cmo-Chr5:9746104 | Cmo06g01345 | Cmo-Chr6:9973532 | 7.51E-93 | dispersed | |
| Cmo06g01345 | Cmo-Chr6:9973532 | Cmo12g01164 | Cmo-Chr12:10534843 | 2.37E-78 | dispersed | |
| Cmo19g00257 | Cmo-Chr19:1873601 | Cmo06g01345 | Cmo-Chr6:9973532 | 2.02E-66 | dispersed | |
| Cmo14g01833 | Cmo-Chr14:13926425 | Cmo06g01345 | Cmo-Chr6:9973532 | 1.19E-154 | wgd | |
| Cmo17g00172 | Cmo-Chr17:1007279 | Cmo06g01345 | Cmo-Chr6:9973532 | 1.22E-64 | wgd | |
| Cmo06g01345 | Cmo-Chr6:9973532 | Cmo08g01072 | Cmo-Chr8:6910716 | 7.25E-35 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmo06g01345 | - | - | cmos:111452940 | 508.449 |