Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo06g01437 ATGGGTATTTCATGGAGTAACAGAAGAAGAAACAATTATCTTCAAAACCCACCTCCGCCCTACCATTCTTCTTCCTCCTTCTATTACCCTTCTGAACCCACATCCCTTCCTCCGCCGCCGCAGACCCATCACTTCACCAATCACAGCCACCCTTACACTCCAACTCCCCAGCCGATACCCTTGCCGCCGATTCCTCCTGCCCCTGCTCCTCACTCCTATTACTTTTCTGGTGGGTACAATTCGTGTAATTATGGGAACTCTTCGATGGGGCGTTTCAATTTCCACCCTCATTATGCCAATCAGAGTAATGGGTGGTCTCAATTTCGGCCGGTGATGGTGCCGCCGTTTCTTCCGCCACCGTCTTTGCCGTTTGTGGAGCATCGACAGGCGAAGAAGGTTAGGAATGATGTGAATGTGCATAAGGATACTTTGAGGATTGAGGTGGATGAACAGAATCCTGATCAGCATTTGGTTTCTTTCGTGTTTGATGCGTTGTATGATGGAAGCATTACCATCCTATTTTTTGCCAAGGAAGAGCCCAACTGTAGGTTTGTTCCAATATATCCCGACGCCTTTAAGCCAGTAAAAATCCCATTTCAAAAGGGTCCTGCTCAGAAATTCTTTCAGCCTGTGGGAACTGGGTTTGACTTGGGATTTTTCGAGTTGGATGACCTCTCAAAACCTTCGCCTTCTGAAGACGTTTTCCCGCTCGTTATATCAGCTGAGACTTGCTCACCCTCTCAGTCCAACGATGAACGAATTGGTGAGCCTCAACCAGATAATTCACATATGCAAATCACTCAAGCTGTTCTGGAGAAGAAAAATGGCAATCCTTTCCAAGTTAAGGTGATCCGGCAACTACTATGGATTGATAGAATGCGTTATGAGTTGCGTGAGATATTCGGTATAGGGAGTTCGTCTTCAGAAGGTTTTGACAATAACGACTCCGGGAAGGAGTGTGTGATTTGCATGACCGAACCCAAGGATACTGCTGTATTACCATGTCGACATATGGTAAGGCTCCATTTGCGTGTTTATTCATGGCAACCATTCGACGAAACTTCGATAATCTATCTGCTACATTTGATTTTAAAACCTTGCATGTGCAGTGAGTGTGCCAAGGAACTGAAGCTTCAATCTAATAAATGTCCGATTTGTCGTCAACCGATCGAAGAACTTATAGAAATCAAGATAAATAATAGCAATCAGTGA 1212 45.05 MGISWSNRRRNNYLQNPPPPYHSSSSFYYPSEPTSLPPPPQTHHFTNHSHPYTPTPQPIPLPPIPPAPAPHSYYFSGGYNSCNYGNSSMGRFNFHPHYANQSNGWSQFRPVMVPPFLPPPSLPFVEHRQAKKVRNDVNVHKDTLRIEVDEQNPDQHLVSFVFDALYDGSITILFFAKEEPNCRFVPIYPDAFKPVKIPFQKGPAQKFFQPVGTGFDLGFFELDDLSKPSPSEDVFPLVISAETCSPSQSNDERIGEPQPDNSHMQITQAVLEKKNGNPFQVKVIRQLLWIDRMRYELREIFGIGSSSSEGFDNNDSGKECVICMTEPKDTAVLPCRHMVRLHLRVYSWQPFDETSIIYLLHLILKPCMCSECAKELKLQSNKCPICRQPIEELIEIKINNSNQ 403
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 10410455 10413526 - CmoCh06G014370.1 Cmo06g01437 384999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo06g01437 403 PANTHER E3 UBIQUITIN-PROTEIN LIGASE LUL3-RELATED 1 338 - -
Cmo06g01437 403 MobiDBLite consensus disorder prediction 1 31 - -
Cmo06g01437 403 MobiDBLite consensus disorder prediction 1 58 - -
Cmo06g01437 403 PANTHER MAHOGUNIN 1 338 IPR045194 GO:0061630
Cmo06g01437 403 PANTHER E3 UBIQUITIN-PROTEIN LIGASE LUL3-RELATED 367 402 - -
Cmo06g01437 403 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 353 397 IPR013083 -
Cmo06g01437 403 PANTHER MAHOGUNIN 367 402 IPR045194 GO:0061630
Cmo06g01437 403 Pfam Zinc finger, C3HC4 type (RING finger) 367 392 - -
Cmo06g01437 403 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 305 341 IPR013083 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo06g01437 Cmo14g01721 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo06g01437 Cmo-Chr6:10410455 Cmo14g00198 Cmo-Chr14:896777 7.23E-87 dispersed
Cmo14g01721 Cmo-Chr14:13462112 Cmo06g01437 Cmo-Chr6:10410455 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo06g01437 - - csv:101203938 610.912