Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo06g01473 | ATGATTAAGGCTATAGAAAGGGCAAAATATAAATCGAAGACATGGAGTGTATCTGATGCTAAGAACGAACCAACTGTTCAAAAGGATGGAACAACGGCACATATTGCAGCTCAAACGTTTACGTTTCGGGAGCTTGCTACAGCGACAAAGAACTTTAGACCTGAATGCTTATTGGGAGAAGGGGGGTTTGGACGAGTTTACAAGGGCCGCTTGGACAGCACGGGACAGGTAGTGGCTGTGAAGCAGCTTGACCGTAATGGTCTCCAAGGAAATCGGGAATTTTTGGTTGAAGTTCTAATGCTTAGCCTGTTACATCACCCAAATCTTGTTAACTTGATAGGCTACTGTGCTGATGGCGATCAACGGCTTCTTGTTTACGAGTTCATGCCATTGGGGTCGTTGGAAGATCATTTACATGATTTTCCACCAGATAAGGAGCCCTTGAATTGGAATACTAGAATGAAGATCGCAGCTGGTGCTGCAAAAGGATTGGAATATTTGCATGACAAAGCGAGCCCGCCTGTTATATATCGGGACTTGAAGTCGTCCAATATTCTTCTAGACGAGGGCTACCATCCCAAGCTGTCAGATTTCGGTCTTGCGAAACTAGGTCCAGTTGGTGATAAGACTCACGTCTCGACGAGAGTAATGGGAACATATGGTTATTGTGCTCCGGAGTATGCTATGACTGGTCAACTCACTCTCAAGTCAGATGTATATAGTTTTGGAGTCGTCTTTCTTGAACTTATCACAGGGCGCAAGGCGATCGATAATACCAGAGGTCCGGGAGAGCATAATCTTGTAGCGTGGGCTCGGCCACTTTTTAAAGATCGTCGAAAGTTCCCTAAGATGGCCGATCCGCTGCTGCAAGGTCGTTATCCCACGCGGGGGCTTTATCAGGCATTGGCAGTTGCGGCAATGTGCTTGCAAGAGCAGGCTGCTACTCGACCTCTAATCGGGGACGTAGTTACTGCTCTGACGTATTTAGCCTCGCAAACTTATGATCCTAATACAGCTGCTTCTCAAAGCAATCGAATGAGTGTTACTACTCCACAATCCCGAGATGAGCGGAGAGGCGTGCCAGATGGATTGGATAGTCCTGATGAGCGTGGTCGAGGACGTTGTTCCCCGTCAAACTACAGAAACTCTGGAGGTACCGAGCTAAGCAGAATTGACACGGGAGGCGGGTCTGGTCGAAAATGGGAATTGGATAAGTTAGAACAACAAGAGTCTCTACGAGACAGTCCTGCATATACAGGACGAGCAAGGGAAACACCGAAGAACCGCGACGTAAACAGAGAACGTGCAGTTGCAGAAGCAAAAATGTGGGGTGAAAACTGGAAAGATAGAAACCGGGCAAACGCGCAAGGCAGCTTCGACAGTTCACAAGAATGA | 1395 | 47.46 | MIKAIERAKYKSKTWSVSDAKNEPTVQKDGTTAHIAAQTFTFRELATATKNFRPECLLGEGGFGRVYKGRLDSTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDFPPDKEPLNWNTRMKIAAGAAKGLEYLHDKASPPVIYRDLKSSNILLDEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVFLELITGRKAIDNTRGPGEHNLVAWARPLFKDRRKFPKMADPLLQGRYPTRGLYQALAVAAMCLQEQAATRPLIGDVVTALTYLASQTYDPNTAASQSNRMSVTTPQSRDERRGVPDGLDSPDERGRGRCSPSNYRNSGGTELSRIDTGGGSGRKWELDKLEQQESLRDSPAYTGRARETPKNRDVNRERAVAEAKMWGENWKDRNRANAQGSFDSSQE | 464 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 10592585 | 10596352 | - | CmoCh06G014730.1 | Cmo06g01473 | 385035 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo06g01473 | 464 | Gene3D | Transferase(Phosphotransferase) domain 1 | 129 | 353 | - | - | |
Cmo06g01473 | 464 | MobiDBLite | consensus disorder prediction | 397 | 411 | - | - | |
Cmo06g01473 | 464 | MobiDBLite | consensus disorder prediction | 337 | 464 | - | - | |
Cmo06g01473 | 464 | CDD | STKc_IRAK | 58 | 327 | - | - | |
Cmo06g01473 | 464 | PANTHER | OS07G0668900 PROTEIN | 14 | 458 | - | - | |
Cmo06g01473 | 464 | PANTHER | SERINE/THREONINE-PROTEIN KINASE PBL27 | 14 | 458 | - | - | |
Cmo06g01473 | 464 | SMART | serkin_6 | 52 | 329 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo06g01473 | 464 | ProSitePatterns | Protein kinases ATP-binding region signature. | 58 | 81 | IPR017441 | GO:0005524 | |
Cmo06g01473 | 464 | MobiDBLite | consensus disorder prediction | 351 | 375 | - | - | |
Cmo06g01473 | 464 | MobiDBLite | consensus disorder prediction | 423 | 448 | - | - | |
Cmo06g01473 | 464 | ProSiteProfiles | Protein kinase domain profile. | 52 | 329 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo06g01473 | 464 | MobiDBLite | consensus disorder prediction | 376 | 390 | - | - | |
Cmo06g01473 | 464 | Gene3D | Phosphorylase Kinase; domain 1 | 22 | 128 | - | - | |
Cmo06g01473 | 464 | Pfam | Protein kinase domain | 57 | 263 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo06g01473 | 464 | SUPERFAMILY | Protein kinase-like (PK-like) | 34 | 326 | IPR011009 | - | |
Cmo06g01473 | 464 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 175 | 187 | IPR008271 | GO:0004672|GO:0006468 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo06g01473 | Cmo14g01676 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo06g01473 | Cmo-Chr6:10592585 | Cmo17g01367 | Cmo-Chr17:10614486 | 0 | dispersed | |
Cmo08g00072 | Cmo-Chr8:389249 | Cmo06g01473 | Cmo-Chr6:10592585 | 2.84E-174 | dispersed | |
Cmo09g00054 | Cmo-Chr9:219005 | Cmo06g01473 | Cmo-Chr6:10592585 | 6.78E-145 | dispersed | |
Cmo20g00489 | Cmo-Chr20:2288463 | Cmo06g01473 | Cmo-Chr6:10592585 | 1.89E-163 | dispersed | |
Cmo14g01676 | Cmo-Chr14:13208212 | Cmo06g01473 | Cmo-Chr6:10592585 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
74437 | PF00069 | Pkinase | 1.10E-45 | CL0016 | Cmo | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo06g01473 | - | - | csv:101207561 | 854.744 |