Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo06g01549 ATGGCGTTCAACTTCTGGGTCACCGCCACCGTCGATCTGCTCCTCCTCCTGATCTTCACGGTGATACCCTTTTCGATTTGTCAGCCAACTGACCAAGCTCCGCCTCCCTCCGCCGATTCTTGCAATAGTATCTTCTTGTCCTATAGTTTCAACCAAGGAACGAAGCTCCCCCCTAATGTCACTGATCGGACCCGTCAGCCGTACCGATTCGAGTCCACTCTCTTGATTCTCAATAACGGCCTTCAGGAGCTTAAGTCTTGGAAGGTTTTTGTGGGGTTTCAGCACGATGAGTTCTTGGTCTCGGCTTCCGGCGCCGTCCTTGCCGATGGGAATAGCGTTCCCGGAAACGTCGGCAATGGGACCGTCTTTGCTGGTTTTCCGATGACCGATTTGAAGACGGCGATTGAAACTGCTGGAGACTTCACTCAGATGCAGGTCCAAGTCAAATTGGTTGGGACCCAATTTGGGGTTGCCCCTCCGAATAGTCCGATGCCTACGAATATATCTCTTGCCAATGATGGATACCTCTGCCCTCGGCCAACTCTACTAGGAAAGAGTGAGATGCACGTCTGTTGTAGACCCGATCCAAGCGTTAAAACAAACATCACAACTAGTGAAGAGTTCTTGCCTCGCCAAAATGGCGATCTAACGATCATGTATGATGTGACAAGAACCTATGATTCGAGTTATTGGGCACAAGTCAAAATTTCTAATCATAATCCTCTCGGTCGTCTTGATTATTGGAAGTTGAGCTGGGAATGGATGAAGGATGAGTTCATCTATTCAATGAAAGGTGCTTATCCTTCTGTTGTTGATTCTACTGATTGCATTTTTGGTAGACAAGGCACTTATTATAAGGATTTAGACTTTGCCAATGTATTAAGCTGTGCAAAAAAGCCAACAATTGTTGATTTGCCTCCAACTAAGGCCAACGACACTACGCTCGGGTTGATCCCGTTCTGTTGTCGAAACGGGACGATCTTGCCTTCTCATATGGACTCAAGCAAGTCGATTTCAGCGTTTCAAATGCAAGTTTTTAAAATGCCACCAGATCTCAATAGATCCCAGATTACACCACCTCAGAATTGGAAGATCAGTGGCGTTCTAAACCCGACGTATAAATGTGGTGCTCCGTTGAGGGTAAGTCCTAGCGAATTCCCAGACTCAAGTGGTTTACCATTGAATTCGACTGCAGTGGCTAGTTGGCAAGTTGTTTGTAACATAACTCACGTCAAGGACGACACACCGAAATGCTGTGTTTCGTTTTCGGCTTACTACAACGATTCTGTCGTCCCGTGTAGAACGTGTGCTTGTGGATGCCCGCATAACACTGCTCGTACATGTAATGCAACGTCCTCTGCAATGCTCCTCCCACCGGAAGCCCTTCTTGTTCCGTTCGAGAATAGGACCGCCATGGCTGTGGCTTGGGCTGGTCTTAAACACTACCCAACTCCCAATCCCATGCCTTGTCCTGATAACTGTGGTGTGAGTATCAATTGGCATTTGTATACCGATTATAGAGACGGATGGAGTGCAAGGATTACTCTCTTCAACTGGGACGAAGTGAACTTTGCAGATTGGTTTGCTGCAGTTCAGATGAAGAAAGCAGCACCTGGTTTCCAGGCAATGTACTCGTTCAACGCGACGACCTTGGAACTGGATGGTGCCAATAATACTATCTTTATGCAGGGTAATCCTGGACTAAACTATCTCGTAGGCGAAACGGACGGAGTCCACCCAGAAAGGGATCCGAGGGTACCCGGAAAACAGCAATCTGTGATATCATTTACAAAGAAGAACATACAAGTTCTTAACATGGCTGCTGGAGATGGGTTCCCCACTAAAGTGTTCTTCAATGGGGAAGAATGTCTACTTCCAAAAACATTCCCTGTTAACGACAGCCAAAGGAACTTGGCTTCGTTGATTCCGAGCATCTTAACGCTACTATTCGTGATTGAAGTTGAAATAGACTATTTTCAGGGACTTTATGAGGTGAATACTCCGAGAAATGATAGGTCTTATGGTCACTCAACACTAGAAGAAGCTGTGCATCATGGCTCTGCCAGTTCTTCTGGCTTGTATTTTTTTGAACTTTTGTGA 2100 46.38 MAFNFWVTATVDLLLLLIFTVIPFSICQPTDQAPPPSADSCNSIFLSYSFNQGTKLPPNVTDRTRQPYRFESTLLILNNGLQELKSWKVFVGFQHDEFLVSASGAVLADGNSVPGNVGNGTVFAGFPMTDLKTAIETAGDFTQMQVQVKLVGTQFGVAPPNSPMPTNISLANDGYLCPRPTLLGKSEMHVCCRPDPSVKTNITTSEEFLPRQNGDLTIMYDVTRTYDSSYWAQVKISNHNPLGRLDYWKLSWEWMKDEFIYSMKGAYPSVVDSTDCIFGRQGTYYKDLDFANVLSCAKKPTIVDLPPTKANDTTLGLIPFCCRNGTILPSHMDSSKSISAFQMQVFKMPPDLNRSQITPPQNWKISGVLNPTYKCGAPLRVSPSEFPDSSGLPLNSTAVASWQVVCNITHVKDDTPKCCVSFSAYYNDSVVPCRTCACGCPHNTARTCNATSSAMLLPPEALLVPFENRTAMAVAWAGLKHYPTPNPMPCPDNCGVSINWHLYTDYRDGWSARITLFNWDEVNFADWFAAVQMKKAAPGFQAMYSFNATTLELDGANNTIFMQGNPGLNYLVGETDGVHPERDPRVPGKQQSVISFTKKNIQVLNMAAGDGFPTKVFFNGEECLLPKTFPVNDSQRNLASLIPSILTLLFVIEVEIDYFQGLYEVNTPRNDRSYGHSTLEEAVHHGSASSSGLYFFELL 699
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 10904370 10907675 - CmoCh06G015490.1 Cmo06g01549 385111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo06g01549 699 PANTHER COBRA-LIKE PROTEIN 7 14 649 - -
Cmo06g01549 699 PANTHER COBRA-LIKE PROTEIN 7 14 649 - -
Cmo06g01549 699 Pfam COBRA-like protein 230 409 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g01012 Cmo-Chr4:5083733 Cmo06g01549 Cmo-Chr6:10904370 0 dispersed
Cmo06g01549 Cmo-Chr6:10904370 Cmo16g00909 Cmo-Chr16:5447441 0 dispersed
Cmo14g01635 Cmo-Chr14:12978566 Cmo06g01549 Cmo-Chr6:10904370 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo06g01549 - - csv:101209258 1196.03