Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo06g01619 ATGAAATCTTCTGTTTCCCTCATTTTCAAACTCCCCGCCATTCTTTCCCCTAGATTTTCGATTATCCCCACCACCGCCATTTCCGCCACCATGTCCACTTCCGATCACTCTTCCCCCGCCTTTGACAGACCTCGCTCCGTCATCAAGAAGGTTCTCGCTAAACTCCAGCACGAAGGCGATGGCGCCGTTGTTCGTCGAGGCATCGGAAGGAGCGATTTGAAGAATCTGGATCCATTTCTGATGCTCGATGATTTTTCCGTTAGTCCGCCGGCTGGATTCCCCGATCATCCTCACAGAGGTTTTGAGACAGTGACTTACATGTTACAGGGAGGAATTACCCATCAAGATTTTGCTGGCCACAAGGGTACGATCAGAACAGGGGATGTACAGTGGATGACAGCAGGAAGAGGTATTATCCATTCTGAAATGCCTGCTGGCGAAGGTCCTCAAAAGGGATTGCAGCTTTGGATCAATCTTGCAGCACATGACAAAATGATGGAACCAAAATATCAGGAGATTCTAAGCGACGACATTCCGAGAGCGGAGAACGACGGTGTCGAAGTTAATGTTATAGCAGGAGAGTCCATGGGAGTCCATTCTCCAATCTACACTCAAACGCCAACGATGTATCTCGACTTCACATTGAAACCAAAAGCTCAAGTGCATCAAAGCATCCCAGACACATGGACTTCTTTCGTATACATAATCGACGGGGAAGGGGTATTCGGGTCGTTGAACTCGTCCCGGGTGGCAGCTCACCATGTGCTAGTGTTAGGACCTGGAGATGGGCTGAGTGTATGGAACAGATCTTCAAATCCATTGAGGTTTATTCTTGTAGCAGGGAAGCCACTGAATGAACCAATTGTTCAGCATGGACCATTTGTGATGAACTCCCAATCTGAAATTGACCAAGCCATTGAGGACTACCACTATGCCAAAAATGGGTTTGAAATGGCAAAGCATTGGAGATCCCAGTGA 978 47.85 MKSSVSLIFKLPAILSPRFSIIPTTAISATMSTSDHSSPAFDRPRSVIKKVLAKLQHEGDGAVVRRGIGRSDLKNLDPFLMLDDFSVSPPAGFPDHPHRGFETVTYMLQGGITHQDFAGHKGTIRTGDVQWMTAGRGIIHSEMPAGEGPQKGLQLWINLAAHDKMMEPKYQEILSDDIPRAENDGVEVNVIAGESMGVHSPIYTQTPTMYLDFTLKPKAQVHQSIPDTWTSFVYIIDGEGVFGSLNSSRVAAHHVLVLGPGDGLSVWNRSSNPLRFILVAGKPLNEPIVQHGPFVMNSQSEIDQAIEDYHYAKNGFEMAKHWRSQ 325
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 11308243 11310343 - CmoCh06G016190.1 Cmo06g01619 385181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo06g01619 325 PIRSF Pirin 43 323 IPR012093 -
Cmo06g01619 325 PANTHER PIRIN-LIKE PROTEIN 34 325 - -
Cmo06g01619 325 PANTHER PIRIN-RELATED 34 325 IPR012093 -
Cmo06g01619 325 CDD cupin_pirin_C 207 283 - -
Cmo06g01619 325 Gene3D Jelly Rolls 179 284 IPR014710 -
Cmo06g01619 325 Pfam Pirin 65 157 IPR003829 -
Cmo06g01619 325 Gene3D Jelly Rolls 58 310 IPR014710 -
Cmo06g01619 325 SUPERFAMILY RmlC-like cupins 45 323 IPR011051 -
Cmo06g01619 325 Pfam Pirin C-terminal cupin domain 210 314 IPR008778 -
Cmo06g01619 325 CDD cupin_pirin_N 62 159 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo06g01619 Cmo14g01545 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo06g01619 Cmo-Chr6:11308243 Cmo16g00975 Cmo-Chr16:6636999 1.68E-143 dispersed
Cmo14g01545 Cmo-Chr14:12339913 Cmo06g01619 Cmo-Chr6:11308243 6.67E-31 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo06g01619 K06911 - csv:101205861 590.497