Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo06g01668 ATGGAGAAAACCCCACCCCCAGAAAAGTCTGAAAGTTTTTCAAGAAATTTCAATAGAAGGATTGCGAATTTGGGCTCACCACGCCGGACTACCGATGCCACCGCTGATGCTAAATCAGAAGCTGAAAAGCATGCCGATCGTGAAGATGAAGCGTTCATTGAAGAGCCTCTTTCTGAATCAGAAACCGCTTTTATTCTCGAAGAGGTTGATCGATTCCTTGCGAATTCGTCCCATGCTAGAGATGACGGATCGAATCTCATGGTTGAAATTCCGAGCTCCGTTCTTTCCTTGTGCAAAATGGTGGACTCGATGACCTCCAGGTTCTATTCTACCAAAATTCCGGCGAAGCTCGGTAGCGATCATGACCTAGATTCTTCGTTTTTCGAAGCTCTTAATCGCATTTCGAAGGTTGCGATTAAATTAAGCGAATTCCCTTCCACCACTGCCTCCATTCCTTCGCTCAATCGAACCACCACGTCTCTACAGCGAGCCATGTCGTTATTGGACGAAGAATTCAACGCGCTTCTGAAAGAATGCAAACATCGAGAGTCCGATTCGAAATTTGATAAGAGAGCGTTGAAGCAATCCTCGTTCAAATCAAGCAACGAATCAACAGATCAACACCACAGCGCCGTTCCTGAATCATCCGAGCCAGATTCTACCAAGGAGGAAGAATTTCCCTCTTTCTCGCTGGAAACTATATCGAAAATGAAAAGAATCGCCGAAACGATGATCTGCGCCGGCTACGAGAAGGAATGTTGTTTCAGCTACAGCTTACTCCGGCAGAGCTCGTTCAAAGGAATACTGAACAAGTACGGCTACGAAAATATTAGCATAGACGACATACAGAAAATGCAATGGGAGATTCTTCAATCGGAAATCGACAAATGGATGGCCGTCGTCAATAAATGCTCAAGTTCCTTGTTCCCAGGCGAGTGGAAGCTCTGCGACGCTGTTTTCGCCGATCATCCCTTCATTGCTCATACGCTCTTCAGCGGTTTAACAAGAGGAATAGTCATCAAGCTTCTCAACTTCGCAAATGCGGTGGTTCTAACAAAGCGATCGGCGGAGAAGATGTTCAAATTACTCGACATGTACGAGACCCTCCGCGATTTGATTCCGGCATTCAATGGCTTCCCTGAAAATTGCAGAACAGAGCTAATTTCAGAAGCGGAAGGGGCAAAACGCGGAATAGGCGAAGCAATAGTCGGGATTTTCTACGACCTAGAAAGCTCAATCAAAAGCGACAACGCGAAAATTCCTGTTCCAGGAGGAGCAGTTCATCCATTGACGCGCTACATAATGAATTACCTAAAATACGCTTGCGAGTACAAAGAAACCCTAGAACAGGTCCTTGAATTCCTCGACCCTAAAGCCGAAGAAAATCGACCGGCAATAATCGACGAAAACGACGATGAATCCCCGAGAAAGTCTCAGCTCGCGTATCAGGTGACGATGGTGATGGATCTGCTGGACGCGAACCTCGCGATGAGATCGAAACTGTACCGCGACGCATCTCTTCGGTACATCTTCCTGATGAACAACGGAAGGTACATATTTCAGAAAATCAAAAGCTCAAGTGGAATAACGGAATTGATGGGAGACCGCTGGTGCCGGAAACGATCGACGAATCTGCGACGGTACCACAAAAATTACCAGCGAGAAACATGGAGTAAGGTGCTGCAATGCCTGAACCACGAAGGATTGCAGGTGAACGGGAAGGTATCGAAGCCGATATTGAAGGAGAGATTCAAAAGCTTCAACGCGATGTTCGACGAAATACACAAAACGCAGAGCAGTTGGGTGGTGAGCGACGACCAGCTTCAATCGGAGCTTCGGATTTCAGTGTCGGCGGTGATGATTCCGGCATACCGTTCGTTCGTGGGGAGATTCAAGCAGTATTTCGATCCGGGAAGACAATCGGAGAAGTACATAAAGTATCAGCCGGAAGATATTGAAGGCTTGATCGAGGACCTGTTTGATGGCAATACTGCCTCTATGTCGAGAAGGAGAACGTAG 2019 46.9 MEKTPPPEKSESFSRNFNRRIANLGSPRRTTDATADAKSEAEKHADREDEAFIEEPLSESETAFILEEVDRFLANSSHARDDGSNLMVEIPSSVLSLCKMVDSMTSRFYSTKIPAKLGSDHDLDSSFFEALNRISKVAIKLSEFPSTTASIPSLNRTTTSLQRAMSLLDEEFNALLKECKHRESDSKFDKRALKQSSFKSSNESTDQHHSAVPESSEPDSTKEEEFPSFSLETISKMKRIAETMICAGYEKECCFSYSLLRQSSFKGILNKYGYENISIDDIQKMQWEILQSEIDKWMAVVNKCSSSLFPGEWKLCDAVFADHPFIAHTLFSGLTRGIVIKLLNFANAVVLTKRSAEKMFKLLDMYETLRDLIPAFNGFPENCRTELISEAEGAKRGIGEAIVGIFYDLESSIKSDNAKIPVPGGAVHPLTRYIMNYLKYACEYKETLEQVLEFLDPKAEENRPAIIDENDDESPRKSQLAYQVTMVMDLLDANLAMRSKLYRDASLRYIFLMNNGRYIFQKIKSSSGITELMGDRWCRKRSTNLRRYHKNYQRETWSKVLQCLNHEGLQVNGKVSKPILKERFKSFNAMFDEIHKTQSSWVVSDDQLQSELRISVSAVMIPAYRSFVGRFKQYFDPGRQSEKYIKYQPEDIEGLIEDLFDGNTASMSRRRT 672
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 11548220 11550238 + CmoCh06G016680.1 Cmo06g01668 385230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo06g01668 672 MobiDBLite consensus disorder prediction 33 51 - -
Cmo06g01668 672 SUPERFAMILY Cullin repeat-like 125 661 IPR016159 -
Cmo06g01668 672 PANTHER EXOCYST COMPLEX PROTEIN EXO70 55 670 IPR004140 GO:0000145|GO:0006887
Cmo06g01668 672 MobiDBLite consensus disorder prediction 16 32 - -
Cmo06g01668 672 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 55 670 - -
Cmo06g01668 672 Gene3D Exocyst complex component Exo70 110 670 - -
Cmo06g01668 672 MobiDBLite consensus disorder prediction 1 15 - -
Cmo06g01668 672 MobiDBLite consensus disorder prediction 1 53 - -
Cmo06g01668 672 MobiDBLite consensus disorder prediction 210 226 - -
Cmo06g01668 672 Pfam Exo70 exocyst complex subunit 296 658 IPR046364 GO:0000145|GO:0005546|GO:0006887
Cmo06g01668 672 MobiDBLite consensus disorder prediction 197 227 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g02383 Cmo-Chr4:17768187 Cmo06g01668 Cmo-Chr6:11548220 0 dispersed
Cmo06g01668 Cmo-Chr6:11548220 Cmo15g00783 Cmo-Chr15:3851042 0 dispersed
Cmo14g01484 Cmo-Chr14:11958809 Cmo06g01668 Cmo-Chr6:11548220 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo06g01668 K07195 - csv:101220402 1104.74