Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo07g00039 ATGGATAAAGTTCACTGTGCACCTTTGCTTTGTGTTGTTGTCTGTATTGAGATGTTTCTATGCGCATCTTGTGTGGATGAATTTGGAGATTCAACAGCTGTGTACATAGTGACCCTTAAGGAACCTCCTTCTTCTACTAATTATTATGCTCAGCTTAGACAGAATGCCACTTCTTCTAGGCTTGCTACTTCTGGTGGATTAAGCATCCACAAACCAAGAAATATATCAAGAAAACATGGAAGATATAGGTCTTATATAGCCCGAGTTCACGATTCATTGTTGAAGAGGGTCTTGAAGGGGGAGAAATATCTAAAGCTCTACAGTTACCATTTCTTGATCAATGGATTTGCTGTGTTTGTTACTGAAGAACAGGCAACTAAACTTTCAAAGAGGAGAGAGGTGGAAAATGTCGTCATGGATTTCTCTGTTAGAACAGCTACGACACATACTCCACAGTTCTTGGGGTTGCCGCAGGCAGCTTGGTCTCAAGATGGTGGCTATGAATCTGCTGGAGCTGGGATCGTGATAGGGTTCGTCGACACTGGCATTGACCCTACACACCCCAGCTTTGCTGATGATTTGACTGATAATCCGTTTCCCATTCCGGCCCACTTCTCGGGAATCTGTGAGGTAACTCCTGATTTCCCGTCTGGATCATGCAATCGGAAGCTTGTTGGAGCGCGCCATTTTGCAGCATCAGCTATAACAAGGGGAATATTTAATGCATCTCAGGATTATGCATCGCCATTTGATGTCGATGGACATGGCACGCACACAGCTTCAATTGCTGCTGGAAACCATGGCATTCCAGTGGTAGTTGCTGGACATCACTTTGGAAATGCTAGTGGGATGGCCCCTCGTTCACACATTGCTGTTTACAAGGCACTGTACAAAAGCTTTGGAGGTTTCGCTGCCGATGTCGTTGCTGCAGTTGATCAGGCTGCTGAAGATGGGGTGGATATAATAAGTTTATCAATCACACCAAATAGGCGGCCCCCTGGCATTGCGACGTTTTTTAATCCCATAGACATGGCACTGCTCTCTGCAGTTAAGGCTGGTATATTTGTTGTGCAAGCAGCTGGCAATACTGGACCAGCACCAAAGAGCATGTCTTCCTTCAGTCCATGGATCTTTACTGTTGGTGCTGCTTCTCATGATAGAACCTATGCTAACTCTATAACCCTTGGCAATAACGTCACCATCCCGGGCGTTGGACTTGCACCTGGAACTTATAATGGCACGAAGTACAAACTAATTGCTGCAATGCATGCATTGAAAAATGGCACACATGTTTCAGAGGACATGTACGTGAGTGAATGCCAAGACTCCAGTAACTTTGATCGGGATCTGATCAAAGGGAAACTTTTAATATGCAGCTACTCGATCAGATTCGTGCTCGGGCTTTCCACGGTTAAACAGGCTTCACAGACAGTGAAGAACTTGAGTGCTGCTGGGGTCATCTTCTATATGGATTCTTTTGTGTTAAGCTTTCGGCTTAACCCAACTCCAATGAGGATGCCTGGCATCATAATTTCATCACCAGAAGATTCCAAGATTCTTCTTCGTTACTACAACTCTTCTTTGGAAGTAAATGGATTAACAAAGAGAATTTCTAAATTTGGAGCTGTTGGTAGCATATCTGGAGGATTAAAGGCAAATTATAGCTCTACTGCTCCACAGATAATGTATTATTCTGCTAGAGGACCAGATCCAGAAGACAGTTCTGTTGATGATTCTGATATTATGAAGCCCAACTTGGTTGCTCCTGGAAATTTCATATGGGCTGCCTGGAGCTCTGTTGCCACGGACTCTGTCGAATTTCTCGGTGAAAACTTTGCAATGATGTCGGGAACAAGCATGGCTGCTCCTCATATTGCTGGCCTAGCCTCACTTATAAAGCAGAAGTACCCTACTCTTAGTCCTTCAGCCATTGCCTCTGCACTATCGACGACTGCTTCTCTTTATGACAAGACCGGTGGACCGATCATGGCTCAGCGTGCTTATGCTAACCCCGAACAGAACCGGTCTCCAGCTACACCTTTTGATATGGGAAGTGGCTTTGTGAATGCAACTGCAGCTCTCGACCCGGGGTTGATCTTCGACTCCAGTTATGATGATTATATGTCGTTTCTTTGCGGTATCAATGGCTCATTTCCTGTGGTCTTCAACTACACAGCCCAGAACTGCGGGCTGTACAATTCCAGCATCAATGGAGCTGATTTGAACTTGCCCTCTGTCACGATTGCGAAACTCAACCAGTCGAGAGTCGTGCAACGAACCGTGACCAACATTGCTGGACCTGAGTTCTATAGAGTTGGCTGGACTGCCCCTTACGGGATTTCTTTGAAGGTCTCTCCAACTCGATTTTCGATAGAGAGTGGCAAGAAACAAGAGCTAACAATATTCTTCAATGCGACGATGAACAGCTCAACTGCTAGCTTTGGAAGAATTGGACTTTTTGGGAGTGCAGGCCATACTATCAACATTCCTCTCTCAGTAATTTGGAAGTTCTCATATTATACTACTAAATGA 2532 44.94 MDKVHCAPLLCVVVCIEMFLCASCVDEFGDSTAVYIVTLKEPPSSTNYYAQLRQNATSSRLATSGGLSIHKPRNISRKHGRYRSYIARVHDSLLKRVLKGEKYLKLYSYHFLINGFAVFVTEEQATKLSKRREVENVVMDFSVRTATTHTPQFLGLPQAAWSQDGGYESAGAGIVIGFVDTGIDPTHPSFADDLTDNPFPIPAHFSGICEVTPDFPSGSCNRKLVGARHFAASAITRGIFNASQDYASPFDVDGHGTHTASIAAGNHGIPVVVAGHHFGNASGMAPRSHIAVYKALYKSFGGFAADVVAAVDQAAEDGVDIISLSITPNRRPPGIATFFNPIDMALLSAVKAGIFVVQAAGNTGPAPKSMSSFSPWIFTVGAASHDRTYANSITLGNNVTIPGVGLAPGTYNGTKYKLIAAMHALKNGTHVSEDMYVSECQDSSNFDRDLIKGKLLICSYSIRFVLGLSTVKQASQTVKNLSAAGVIFYMDSFVLSFRLNPTPMRMPGIIISSPEDSKILLRYYNSSLEVNGLTKRISKFGAVGSISGGLKANYSSTAPQIMYYSARGPDPEDSSVDDSDIMKPNLVAPGNFIWAAWSSVATDSVEFLGENFAMMSGTSMAAPHIAGLASLIKQKYPTLSPSAIASALSTTASLYDKTGGPIMAQRAYANPEQNRSPATPFDMGSGFVNATAALDPGLIFDSSYDDYMSFLCGINGSFPVVFNYTAQNCGLYNSSINGADLNLPSVTIAKLNQSRVVQRTVTNIAGPEFYRVGWTAPYGISLKVSPTRFSIESGKKQELTIFFNATMNSSTASFGRIGLFGSAGHTINIPLSVIWKFSYYTTK 843
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 270776 275412 - CmoCh07G000390.1 Cmo07g00039 385347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo07g00039 843 ProSitePatterns Serine proteases, subtilase family, serine active site. 617 627 IPR023828 -
Cmo07g00039 843 CDD PA_subtilisin_like 392 527 - -
Cmo07g00039 843 CDD Peptidases_S8_3 146 653 IPR034197 -
Cmo07g00039 843 Pfam Fibronectin type-III domain 740 833 IPR041469 -
Cmo07g00039 843 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 20 837 - -
Cmo07g00039 843 PRINTS Subtilisin serine protease family (S8) signature 171 190 IPR015500 -
Cmo07g00039 843 PRINTS Subtilisin serine protease family (S8) signature 251 264 IPR015500 -
Cmo07g00039 843 PRINTS Subtilisin serine protease family (S8) signature 616 632 IPR015500 -
Cmo07g00039 843 Gene3D Peptidase S8/S53 domain 173 707 IPR036852 GO:0004252|GO:0006508
Cmo07g00039 843 ProSiteProfiles Serine proteases, subtilase domain profile. 151 694 - -
Cmo07g00039 843 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 176 187 IPR023827 -
Cmo07g00039 843 SUPERFAMILY Subtilisin-like 146 698 IPR036852 GO:0004252|GO:0006508
Cmo07g00039 843 Pfam Subtilase family 171 657 IPR000209 GO:0006508|GO:0008236
Cmo07g00039 843 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 144 IPR037045 -
Cmo07g00039 843 Pfam Peptidase inhibitor I9 34 146 IPR010259 -
Cmo07g00039 843 Gene3D - 711 834 - -
Cmo07g00039 843 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 20 837 IPR045051 -
Cmo07g00039 843 Gene3D - 386 554 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo07g00039 Cmo18g00546 CCT
Cmo03g01474 Cmo07g00039 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo05g00748 Cmo-Chr5:3956217 Cmo07g00039 Cmo-Chr7:270776 0 dispersed
Cmo07g00039 Cmo-Chr7:270776 Cmo12g00913 Cmo-Chr12:8405049 0 dispersed
Cmo18g00547 Cmo-Chr18:4242328 Cmo07g00039 Cmo-Chr7:270776 4.67E-43 transposed
Cmo03g01474 Cmo-Chr3:10565873 Cmo07g00039 Cmo-Chr7:270776 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo07g00039 - - bhj:120074717 1508.43