Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo07g00050 | ATGTCGCCTCTTCCTCTGATCCTCCTCCTCTCCCTTCCATTAGCATTTTCCTATGAAACAGAGGGATCCCCTGTTCAAAGTTTTGTGGACTGTCTTCCAATTCACGCCTCACCCTCCATCCACGATGTCATCTACACTCCTCAAAACACTTCCTTTTTGTCCATCCTTCAATCTTACAACAGAAACCTCCGATTTGAAACTCCACAAACCCCAAACCCTGTGCTGATCATCACGCCTCTCGACGCAACCCAAGTCCAAGCCACCATCGCTTGCGCCAACCCCTTGGGGCTGCAGCTCCGAGTGAGGAGCGGCGGCCATGATTACGAGGGCCTCTCCTATCAAGCTCATGTCCCTTTTGTTCTTCTCGACATGTTCAATCTTCGTAAGATTGATATTTACAAGGATGGCTATGATTACGTTGCGTGGATTGAAGCTGGTGCCATTCTGGGCGAGCTCTACCATCGTATTGCCGAATTCAGTCCAAACCTTGCGTTTCCTGGAGGGGTTTGCTTCACCCTCGGCGTTGGAGGTCATTTCAGCGGCGGTGGCTATGGGAATCTCATGAGAAAATATGGGCTTTCAGTTGATAATATTGTGGATGCTTTGTTTGTTGACGCCACTGGGGCTGTTCTTGATCGTAAGTCGATGGGGGAGGATCTTTTTTGGGCTATTAGAGGAGGTGGCGCTGCCAGTTTCGGGGTTGTTATTTCGTGGAAGATCAAATTGGTGTCAGTCCCTGAAACCGTCACGGTTTTCAACGTGAATCTGAGACCAGAACAAGGCGCACTCGATGTGGCTCATCGATGGCAGTTCGTGGCCCCTAATCTGCCGGACGAATTGTTTATAAGACTAATGCATACCGTAGTGGGTTCAACAACTGAAAAAGGGGAGCTCACAGTGCAAGCTTCGTTCGTTGGTTTGTTCTTGGGAACACCCAAATCGCTCATTCCGATCATGAACAAGAATTTCCCTGAGTTGGGTCTGAAGCAAAGCGATTGCCGCGAAGTAAGATGGGTTGAATCCACCATATTTTGGTACAAGGGCCCCATAGGAAGCAACATTGATATTCTGCTTGAAAGACCCAAAAACGGATCCTATTTCTTCAAGGGCAGGTCGGACTATGTGAAGAAGGCGATCTCGAAGGAAGGGATTCAGGGGATATGGCGGACCATGGTCGGATTGAATTCCACCTCATTGACGATGCAATGGAACCCATACGGCGGAAGAATGTGGGAAATTTCAGAATCTGCAACTCCATTTCCACACAGAGCAGGGAACTTGTATTTGATTCAGTACACGTTGTCGTGGATGAAACAAGGAATGGAATCCACAAACCATTACATGAACATTTCGAGGAGTTTGTACGAATACATGACTCCATTGGTGTCGAGCTCGCCCAGAGAATCGTTTTTAAATTACAGAGACCTTGAGATTGGGGCGAATCCCAGCACTGAAACCAACTACATGGTTGCTGAAGAATACGGGCGGAAGTATTTCAAGGGGAACTTTGATCGGTTGATGAAAGTGAAGACGATGGTGGATCCTCATAATTTCTTCAGAAACGAACAGATTTGCCCCTTCTTCTCCCTTTTCCTCAGATCGGAGAAACTGAATCCAATGGTCGGAGGCTTTGAAGTGGGAGCTGTTCCCTACAACCCGGACGGTTGGGGTCCGCCGGAATCGACTGCCACCCTCGCCGCTTCCTCTAACCTCCCTCTCAATGTCCCCTTTGCCCCATTCTCTCGCTCCGATAAGCTTGGTCGGATCGCCGATTGGACCCGAACAATGAATAACCCTGGTCGCCCCAAGGCTGCTTCGGATTCCGTCTTCGATTTCACTAATGACGATTCCTTCCCGGCCAATGCCGACGAGGACATGTCCTTCCGTTTGGTTGATGGAAAGCCTCCTCCGCGCCCCAAATTTGGCCCTAAATGGCGATTCAACCAGCAAAGGACACAGCTACCTCAGCGCCGTGACGAAGAAGTTGAGGCTCGAAAGCGTGAGGCTGAGAAGGAGCGGGCTCGCCGTGACCGTCTTTACAACCTCAACAGGTCTAATGTCAATGCGACCCGTCGTGAAGCTGCTGTCTTCAAATCCTCTGTGGAAATTCAACCAGAATGGAACATGCTTGATCAGATTCCCTTCTCCACTTTCTCGAAGCTGTCCTTCTCTGTTGCTGAGCCCGAAGACCTTCTTCTGTGCGGCGGGCTAGAGTTCTATGATCGAACAAACGACCGAATCACTCCCAAGAACGAGCGCCGTCTTGAGCGCTTCAAGAACCGCAACTTCTTTAAGGTAACTACTACCGACGATCCTGTCATTCGTCGTCTCGCAAATGAGGACAAAGCCACAGTTTTTGCTACCGATGCCATCCTTTCTACCCTTATGTGCGCAACGAGATCGGTTTATTCCTGGGACATTGTGGTTCAACGTGTTGGGAACAAGCTTTTCTTTGATAAGAGGGATGGGTCGCAACTTGATTTGCTTGCTGTCCACGAGACCTCTCAGGAACCCTTACCAGAGGCGAAGGACGATATCAATTCAGCGTATTCACTGAGTGTCGAAGCTGCTTACATTAATCAGAACTTCTCGCAGCAAGTTTTAGTTAGGGACGGAAATAAGGTGGCCTTTGACGAGCCAAACCCATTTGCAAACGAGGGAGAGGAGGTCGCTTCAGTTGCTTACAGGTATAGGAGGTGGAAACTTGATGATGACATGTATCTTGTGGCCAGGTGCGAGGTTCAAAGTGTTATGGAGGTTAATAAGCAGAGATCATTCTTGACTTTGAATGCTCTTAATGAATTTGATTCCAAGTATTCAGGTGTCGATTGGAGGCAGAAATTGGAGACACAGAGGGGTGCTGTTTTGGCCACAGAGTTGAAGAACAATGCCAATAAATTGGCAAAATGGACAGCTCAAGCCTTATTAGCTAGCGCAGATATGATGAAGTTGGGGTATGTCTCTAGGGTTCATCCTCGTGATCACTTCAACCATGTCATCTTAGCTGTGGTTGGGTATAAACCGAAGGATTTTGCAGCTCAAATTAACTTAAATACGTCTAACATGTGGGGTATTGTCAAATCCATCGTGGATTTGTGCATGAAATTGAATGAAGGTAAGTATGTTTTGGTTAAGGACCCATCCAAACCACAGGTTAGGATCTATGAGGTTCCTGCGGATGCATTTGAGAATGACTATGTTGAGGAGCCACTGGCTGAGGAGGACCAAGTGCAACCTCCAGGAGAAGATGAAAATGGCGCCACTGCTAATGCGGGGACTGATGATGCCGCAGAGAAGGTTGATGCTGCTCAAGCTTAA | 3318 | 48.34 | MSPLPLILLLSLPLAFSYETEGSPVQSFVDCLPIHASPSIHDVIYTPQNTSFLSILQSYNRNLRFETPQTPNPVLIITPLDATQVQATIACANPLGLQLRVRSGGHDYEGLSYQAHVPFVLLDMFNLRKIDIYKDGYDYVAWIEAGAILGELYHRIAEFSPNLAFPGGVCFTLGVGGHFSGGGYGNLMRKYGLSVDNIVDALFVDATGAVLDRKSMGEDLFWAIRGGGAASFGVVISWKIKLVSVPETVTVFNVNLRPEQGALDVAHRWQFVAPNLPDELFIRLMHTVVGSTTEKGELTVQASFVGLFLGTPKSLIPIMNKNFPELGLKQSDCREVRWVESTIFWYKGPIGSNIDILLERPKNGSYFFKGRSDYVKKAISKEGIQGIWRTMVGLNSTSLTMQWNPYGGRMWEISESATPFPHRAGNLYLIQYTLSWMKQGMESTNHYMNISRSLYEYMTPLVSSSPRESFLNYRDLEIGANPSTETNYMVAEEYGRKYFKGNFDRLMKVKTMVDPHNFFRNEQICPFFSLFLRSEKLNPMVGGFEVGAVPYNPDGWGPPESTATLAASSNLPLNVPFAPFSRSDKLGRIADWTRTMNNPGRPKAASDSVFDFTNDDSFPANADEDMSFRLVDGKPPPRPKFGPKWRFNQQRTQLPQRRDEEVEARKREAEKERARRDRLYNLNRSNVNATRREAAVFKSSVEIQPEWNMLDQIPFSTFSKLSFSVAEPEDLLLCGGLEFYDRTNDRITPKNERRLERFKNRNFFKVTTTDDPVIRRLANEDKATVFATDAILSTLMCATRSVYSWDIVVQRVGNKLFFDKRDGSQLDLLAVHETSQEPLPEAKDDINSAYSLSVEAAYINQNFSQQVLVRDGNKVAFDEPNPFANEGEEVASVAYRYRRWKLDDDMYLVARCEVQSVMEVNKQRSFLTLNALNEFDSKYSGVDWRQKLETQRGAVLATELKNNANKLAKWTAQALLASADMMKLGYVSRVHPRDHFNHVILAVVGYKPKDFAAQINLNTSNMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPLAEEDQVQPPGEDENGATANAGTDDAAEKVDAAQA | 1105 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 318886 | 323197 | - | CmoCh07G000500.1 | Cmo07g00050 | 385358 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo07g00050 | 1105 | Hamap | Eukaryotic translation initiation factor 3 subunit D [EIF3D]. | 542 | 1068 | IPR007783 | GO:0003743|GO:0005737|GO:0005852 | |
Cmo07g00050 | 1105 | Gene3D | - | 23 | 127 | IPR016167 | - | |
Cmo07g00050 | 1105 | ProSiteProfiles | PCMH-type FAD-binding domain profile. | 69 | 245 | IPR016166 | GO:0071949 | |
Cmo07g00050 | 1105 | Coils | Coil | 657 | 677 | - | - | |
Cmo07g00050 | 1105 | Gene3D | - | 139 | 523 | IPR016169 | - | |
Cmo07g00050 | 1105 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 7 | 543 | 1098 | IPR007783 | GO:0003743|GO:0005737|GO:0005852 | |
Cmo07g00050 | 1105 | MobiDBLite | consensus disorder prediction | 1068 | 1105 | - | - | |
Cmo07g00050 | 1105 | Pfam | Berberine and berberine like | 469 | 523 | IPR012951 | GO:0016491|GO:0050660 | |
Cmo07g00050 | 1105 | Pfam | Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) | 545 | 1056 | IPR007783 | GO:0003743|GO:0005737|GO:0005852 | |
Cmo07g00050 | 1105 | SUPERFAMILY | FAD-binding/transporter-associated domain-like | 41 | 246 | IPR036318 | GO:0050660 | |
Cmo07g00050 | 1105 | Pfam | FAD binding domain | 75 | 211 | IPR006094 | GO:0050660 | |
Cmo07g00050 | 1105 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT D | 543 | 1098 | - | - | |
Cmo07g00050 | 1105 | Gene3D | - | 248 | 465 | - | - | |
Cmo07g00050 | 1105 | MobiDBLite | consensus disorder prediction | 653 | 673 | - | - | |
Cmo07g00050 | 1105 | MobiDBLite | consensus disorder prediction | 627 | 673 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo07g00050 | Cmo-Chr7:318886 | Cmo03g01459 | Cmo-Chr3:10516289 | 0 | dispersed | |
Cmo03g01461 | Cmo-Chr3:10521434 | Cmo07g00050 | Cmo-Chr7:318886 | 0 | transposed | |
Cmo13g00505 | Cmo-Chr13:5983604 | Cmo07g00050 | Cmo-Chr7:318886 | 2.97E-154 | wgd | |
Cmo18g00496 | Cmo-Chr18:3435571 | Cmo07g00050 | Cmo-Chr7:318886 | 6.39E-157 | wgd | |
Cmo03g01458 | Cmo-Chr3:10512899 | Cmo07g00050 | Cmo-Chr7:318886 | 5.89E-166 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo07g00050 | K03251 | - | csv:101208923 | 1073.54 |